prot_S-firma_F_contig10064.134.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10064.134.1
Unique Nameprot_S-firma_F_contig10064.134.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length56
Homology
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: A0A5J4YQK9_PORPP (Chromodomain-helicase-DNA-binding protein 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQK9_PORPP)

HSP 1 Score: 68.2 bits (165), Expect = 5.470e-12
Identity = 26/47 (55.32%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    9 IHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            +H+S CY C +GGRL+CC+ C  V HL C QPPL A P  DW C  C
Sbjct:  365 LHDSCCYMCNEGGRLLCCNGCSHVVHLGCVQPPLPATPRGDWYCSDC 411          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: A0A2G8LE03_STIJA (Putative nucleosome-remodeling factor subunit BPTF-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LE03_STIJA)

HSP 1 Score: 67.0 bits (162), Expect = 1.400e-11
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    4 SQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            S+ A  ++  C +C   G LICC +C  V HLEC +PPL AVP+DDW+C VC
Sbjct:  140 SEGAITYDDHCRSCHRLGDLICCETCSAVYHLECVEPPLKAVPEDDWLCSVC 191          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: A0A3B3SLR2_9TELE (DNA helicase n=4 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SLR2_9TELE)

HSP 1 Score: 66.2 bits (160), Expect = 2.620e-11
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    5 QDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            Q+   H  FC  C+DGG L+CC SC    HL C  PPLA++PD +WVC  C
Sbjct:  359 QEDDNHMEFCRVCKDGGELLCCDSCPSSYHLRCLNPPLASIPDGEWVCPRC 409          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: UPI00145592FB (nucleosome-remodeling factor subunit BPTF-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145592FB)

HSP 1 Score: 66.2 bits (160), Expect = 2.630e-11
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    4 SQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            S+ A  ++  C AC   G L+CC +C  V HLEC  PPL  VP+DDW+C VC
Sbjct:  385 SEGAITYDDHCRACHKLGDLLCCETCTAVYHLECVDPPLTEVPEDDWLCSVC 436          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: A0A8B7XHH5_ACAPL (nucleosome-remodeling factor subunit BPTF-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XHH5_ACAPL)

HSP 1 Score: 66.2 bits (160), Expect = 2.630e-11
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    4 SQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            S+ A  ++  C AC   G L+CC +C  V HLEC  PPL  VP+DDW+C VC
Sbjct:  444 SEGAITYDDHCRACHKLGDLLCCETCTAVYHLECVDPPLTEVPEDDWLCSVC 495          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: UPI0018D63C23 (nucleosome-remodeling factor subunit BPTF-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D63C23)

HSP 1 Score: 66.2 bits (160), Expect = 2.630e-11
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    4 SQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            S+ A  ++  C AC   G L+CC +C  V HLEC  PPL  VP+DDW+C VC
Sbjct:  442 SEGAITYDDHCRACHKLGDLLCCETCTAVYHLECVDPPLTEVPEDDWLCSVC 493          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: UPI0003F0B9BA (nucleosome-remodeling factor subunit BPTF-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B9BA)

HSP 1 Score: 63.2 bits (152), Expect = 3.190e-10
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    4 SQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVCA 56
            ++ A  ++  C  C   G L+CC +C  V HLEC  PPL  VP++DWVC +CA
Sbjct:  307 NEGAITYDDHCRNCHKMGDLLCCETCSAVYHLECVNPPLEEVPEEDWVCEICA 359          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: A0A7R9A7M3_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A7M3_9CRUS)

HSP 1 Score: 62.0 bits (149), Expect = 8.180e-10
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0
Query:    9 IHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            IHE  C  C   G L+CC +C  V HL+C  PPL  VPD+DW C +C
Sbjct:  324 IHEDHCRVCHRLGDLLCCETCSGVYHLQCMDPPLEDVPDEDWQCQIC 370          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: UPI001B8877C6 (nucleosome-remodeling factor subunit BPTF-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8877C6)

HSP 1 Score: 61.2 bits (147), Expect = 1.530e-9
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    3 TSQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            T +    ++  C AC   G L+CC +C  V HL C  PP+A VP+DDW+C VC
Sbjct:  315 TDEGNIHYDDHCRACHKLGDLLCCETCSAVYHLACVDPPMAEVPEDDWLCSVC 367          
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Match: H0WSN5_OTOGA (DNA helicase n=139 Tax=Eutheria TaxID=9347 RepID=H0WSN5_OTOGA)

HSP 1 Score: 60.8 bits (146), Expect = 2.090e-9
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   10 HESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDWVCHVC 55
            H  FC  C+DGG L+CC +C    HL C  PPLA +P+ +W+C  C
Sbjct:  414 HMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLAEIPNGEWLCPRC 459          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10064.134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J4YQK9_PORPP5.470e-1255.32Chromodomain-helicase-DNA-binding protein 4 n=1 Ta... [more]
A0A2G8LE03_STIJA1.400e-1151.92Putative nucleosome-remodeling factor subunit BPTF... [more]
A0A3B3SLR2_9TELE2.620e-1150.98DNA helicase n=4 Tax=Paramormyrops kingsleyae TaxI... [more]
UPI00145592FB2.630e-1150.00nucleosome-remodeling factor subunit BPTF-like n=1... [more]
A0A8B7XHH5_ACAPL2.630e-1150.00nucleosome-remodeling factor subunit BPTF-like iso... [more]
UPI0018D63C232.630e-1150.00nucleosome-remodeling factor subunit BPTF-like iso... [more]
UPI0003F0B9BA3.190e-1045.28nucleosome-remodeling factor subunit BPTF-like n=1... [more]
A0A7R9A7M3_9CRUS8.180e-1051.06Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
UPI001B8877C61.530e-945.28nucleosome-remodeling factor subunit BPTF-like n=1... [more]
H0WSN5_OTOGA2.090e-947.83DNA helicase n=139 Tax=Eutheria TaxID=9347 RepID=H... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 13..56
e-value: 2.3E-8
score: 43.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..56
e-value: 4.5E-16
score: 60.3
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 13..55
e-value: 9.2E-8
score: 31.9
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 11..56
score: 9.543
NoneNo IPR availablePANTHERPTHR24102PHD FINGER PROTEINcoord: 4..56
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 9..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10064contigS-firma_F_contig10064:422..589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10064.134.1mRNA_S-firma_F_contig10064.134.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10064 422..589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10064.134.1 ID=prot_S-firma_F_contig10064.134.1|Name=mRNA_S-firma_F_contig10064.134.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=56bp
MGTSQDAAIHESFCYACQDGGRLICCSSCVRVSHLECAQPPLAAVPDDDW
VCHVCA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR001965Znf_PHD