prot_S-firma_F_contig10007.69.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10007.69.1
Unique Nameprot_S-firma_F_contig10007.69.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length317
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A6H5KET6_9PHAE (UV excision repair protein RAD23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KET6_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 1.220e-88
Identity = 234/339 (69.03%), Postives = 249/339 (73.45%), Query Frame = 0 
Query:    1 MSRSLLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDPASQQLICGGKMLKDDDALATGVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVAAGAGVRQQGGDDAMGGADAEDGG-----------------------AADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEPPDAAGQAMMDMG 316
            M+RSL VKT+KGE FR+DVAEE  MSDVKAKI+EVRG DPA+Q LICGGK LKD D+LA  V AGGFLVLMVK RRA P   AA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                L+VDP +V+MLTAMGFP DQATAALRAAFNDVSRAASYLMEGIP +   AGAG          GG DA                           AA LA+ALM M+ GEGNPLNFMRFHPQFD+LR LVRENPAMLPQVLQ LA QSPELI RINQHPD FLRLMNEPPDA GQA+M+MG
Sbjct:    1 MTRSLTVKTLKGEVFRIDVAEESVMSDVKAKIAEVRGHDPATQVLICGGKTLKDGDSLADSVAAGGFLVLMVK-RRANPVANAAPTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGANET---------LSVDPTNVDMLTAMGFPADQATAALRAAFNDVSRAASYLMEGIPHN---AGAGT---------GGGDARXXXXXXXXXXXXXXXXXXXXXEXXXXAAGLAQALMGMEAGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQALATQSPELIGRINQHPDAFLRLMNEPPDAEGQAIMEMG 317
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A836CLA0_9STRA (UV excision repair protein RAD23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.230e-25
Identity = 68/150 (45.33%), Postives = 88/150 (58.67%), Query Frame = 0 
Query:  172 MGFPEDQATAALRAAFNDVSRAASYLMEGIPD----DVVAAGAGVRQQGGD--------DAMGGADAEDGGAADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEPPDAAG 309
            MGFPEDQ  AAL+AAFN++  AA+YLM G+PD    D  A    +   G          D + G   +  G AD  EA    +GG  NPL  +R+HPQF +LR LV+ NPA LP+++QG+  QSPEL+  IN HP  F++LMN   D  G
Sbjct:    1 MGFPEDQVRAALQAAFNNLEVAANYLMTGLPDFAAPDFEAHQPNIETSGVGGTVGIVPADILSGPMGDTLGDADDMEAAQGFEGG-ANPLAALRYHPQFLELRELVQSNPAALPEIIQGIGEQSPELLNMINAHPQAFVQLMNSTGDDLG 149
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A1Y1XXG2_9FUNG (UV excision repair protein RAD23 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXG2_9FUNG)

HSP 1 Score: 103 bits (256), Expect = 2.220e-21
Identity = 130/312 (41.67%), Postives = 178/312 (57.05%), Query Frame = 0 
Query:    7 VKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDPASQQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDP---ASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVA-AGAGVRQQGGDDAMGGADAEDGGAADLAEALMEMQG----------GEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNE 303
            +KT++ +AF++DV  E K+S +K KI + +G   + Q+LI  GK+L DD  +A+  V    F+V+MV K +A+PA   +            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   GL   P   A++  +  MGF  +Q T ALRA+FN+  RA  YLM GIP+ ++       +Q+    +   A    G   +L  A  +             G G  L+F+R  PQF QLR LV++NPA+L  +LQ L   +P+L++ IN + D FL+L++E
Sbjct:    5 IKTLQQKAFQIDVEPEDKISTLKEKIEQSQGHQVSHQKLIFSGKILNDDQTVASCNVTEKDFMVVMVSKPKASPAAAKSPAPATPAVTAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGWESGN-----------GLVTGPEYEAAINNMIEMGFEREQVTKALRASFNNPERAVEYLMNGIPEHLLGNTQQPAQQEAHTPSQVPASPASGQPQNLFTAAAQQAAQERGAQPQATGGGGDLSFLRSQPQFQQLRQLVQQNPALLQPLLQQLGQANPQLLQLINANQDTFLQLLSE 305
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A1V9XA41_9ACAR (UV excision repair protein RAD23 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XA41_9ACAR)

HSP 1 Score: 102 bits (254), Expect = 2.680e-21
Identity = 104/320 (32.50%), Postives = 150/320 (46.88%), Query Frame = 0 
Query:    1 MSRSLLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGD--DPASQQLICGGKMLKDDDAL-ATGVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPAS-VEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVAAGAGVRQQGGDDAMGGADAEDGGAADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEPPDAAGQAMMDMG 316
            M  ++ +K +  E F +++ +EC + ++KAKI E +GD    A Q+LI  G+++ DD+ L A  +    F+V+MV K   APA P                        XXXXXXXXXXXXXX                                        VD  S V  +T MG+P DQ   ALRA++N+  RA  YL+ GIP +      GV       A GGA          A      QG E  PL+F+R  PQF Q+RN +RENPA+L  ++Q L + +P+++  I Q+ D+F+ L+NE      + +  +G
Sbjct:    1 MLLTVSLKCLTNELFTIEIDDECTVKEMKAKIYEQKGDAFPAAHQKLIAQGRIMADDEKLKAYELHNVKFVVIMVSKPAPAPAAPPGGAQAASKVTPPAPAETPASTDNXXXXXXXXXXXXXXTPNAATGESALVR--------------------------GVDYESMVRNITEMGYPRDQVERALRASYNNPDRAVEYLVTGIPPEEDEPQIGVNLP----ATGGA------GTVTAPGGPPGQGSEP-PLSFLRTQPQFQQMRNAIRENPALLESIIQQLGSNNPDMLRLITQNQDEFMHLLNEEDGRGEEPLAALG 283
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A7M7J9X3_VARDE (UV excision repair protein RAD23 n=2 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7J9X3_VARDE)

HSP 1 Score: 101 bits (252), Expect = 5.940e-21
Identity = 86/316 (27.22%), Postives = 129/316 (40.82%), Query Frame = 0 
Query:    1 MSRSLLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGD--DPASQQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIP--DDVVAAGAGVRQQGGDDAMGGADAEDGGAADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEPPDAAGQA 311
            M  ++ +K +  E F V++ +EC + ++K KI E +G+    A Q+LI  G+++ DDD L T  +    F+V+MV K   AP  P                                                                                  +V  +  MG+P DQ   ALRA++N+  RA  YL+ GIP  +D  A G  V   GG                        QGGE + LNF+R  PQF Q+RN +RENP +L  ++Q L   +P+L+  I ++  +F+RL+NE  D  G+A
Sbjct:    1 MLLTVSLKCLTNELFTVEIDDECTVKEMKEKIFEQKGEAFPAAHQKLIAQGRIMADDDKLKTYELDKVKFVVIMVSKPAPAPVAPPGGAMAAPKPAPPDAPESPLNRDEPSRDTPTPTRPSNPTPNAATGESGLVRSDNYD-------------------------GTVRNIMEMGYPRDQVERALRASYNNAERAVEYLVTGIPVEEDEPAVGVNVPATGGVXXXX--------XXXXXXXXXXSQGGEPH-LNFLRSQPQFQQMRNAIRENPTLLESIIQQLGANNPDLLRLITENQAEFMRLLNEEDDEVGEA 282
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: L8GWS2_ACACA (UV excision repair protein RAD23 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWS2_ACACA)

HSP 1 Score: 101 bits (252), Expect = 9.830e-21
Identity = 117/321 (36.45%), Postives = 160/321 (49.84%), Query Frame = 0 
Query:    7 VKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDPASQQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRR----AAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVAAGAG-VRQQGGDDAMGGADAED--------------GGAA---DLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEP 304
            +KTI+ + F V+V +   + DVK K+  +R ++ A Q+LI  GK+L DD  + T  +    FLVLMV+K +    AAPA PAA   XXXXX      XXXXXXXXXXXXXXXXXX                                               A V  +  MGFP ++   ALRA+FN+ +RA  YLM GIPD    A A    ++    A GG  A                GG +   +L  ALM  QGG G    ++R HPQF+Q++ +V+ NP +L  +LQ L   +P++++ I QH  +F+ L+NEP
Sbjct:    6 IKTIQQQQFEVEVPDTATVLDVKKKVEALRSENVAWQKLIFAGKILADDAKINTLNIKPTEFLVLMVRKPKEANVAAPA-PAAQPAXXXXXAQPTQTXXXXXXXXXXXXXXXXXXPSSGGSIESEAASALVTGSDFE-------------------------AMVSNIMEMGFPREEVLRALRASFNNPNRAVEYLMTGIPDMPAQAPASPAAERAAAPAAGGEGAXXXXXXXXXXXXXXXXGGISLPSNLLGALMGQQGGAGGHFEWLRQHPQFNQIKAMVQRNPQLLGPLLQQLGQLNPQILQMIGQHQAEFMALLNEP 300
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: UPI001425B0E0 (UV excision repair protein RAD23 homolog B-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B0E0)

HSP 1 Score: 99.0 bits (245), Expect = 1.140e-19
Identity = 137/334 (41.02%), Postives = 183/334 (54.79%), Query Frame = 0 
Query:    5 LLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGDD--PAS-QQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRRAA--PAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGL------AVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVA---AGAGVRQQGGDDAMGGAD-----------AEDGG---AADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEPPDAAG 309
            + +KT++   F++++ E C + ++K KI   +G +  PA+ Q+LI  GK+L DD  L    +    F+V+MV K +A+  PA P AS    XXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXX                            A     V  L AMGF  D+ T ALRA+FN+  RA  YL+ GIP+ V     A A  +Q     A   AD           A  GG   A   A+   +      +PL F+R  P+F Q+R+++R+NP +LP +LQ L   +P L++ IN+H   F+ L+NEP  + G
Sbjct:    3 ITIKTLQQVTFQIEIDETCSVKELKEKIESEKGSEGFPANGQKLIYAGKILSDDSQLKEYNIVPANFVVVMVTKAKASSVPAKPPASTTPAXXXXXXXXXXXXXXXXXXXXXXXDSNXXXXXXXXXXXXXXXXXXXXXXSEATDAPADIEGASASALSQAESALVIGAEYEQMVSQLMAMGFGRDKVTLALRASFNNPDRATEYLLSGIPESVTREMNAAAEAQQAAVQGAQPAADQPPXXXXXXXPASTGGQPAAVPPAQIPGQEASSAEDPLGFLRLQPEFQQMRHMLRQNPHLLPALLQQLGQSNPPLLQLINRHQQSFIELLNEPEGSGG 336
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A7S3P0B9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0B9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.200e-19
Identity = 148/300 (49.33%), Postives = 183/300 (61.00%), Query Frame = 0 
Query:    7 VKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDPA-SQQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVAAGAGVRQQGGDDAMGGADAEDGGAADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEP 304
            VKT+ G  F ++  +   ++ VK  I     + PA S +LI  GK+LKD+D L+T G+    FLV+M+ K++AAP  PA  XXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     A+  A+VE L  MGFPE+     +R A  +   A  +L  GIP+ +  A      +GG        A  GG A               PL  +R HPQF+ LR LV+ NP ML QVL  +  Q P+L++ IN +   FL++MNEP
Sbjct:    5 VKTLTGRKFPIEADDSSTVAAVKGIIEAANAELPAASMKLIHSGKVLKDEDILSTVGIKENDFLVVMITKKKAAPKTPAPQXXXXXXXXXXXXXXXXXXXXXXXXXAASTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----AISDAAVENLVGMGFPEEAVRHCMRVAQGNPDLAVEFLTNGIPEGMEQAMQAAAARGGT-----TPASSGGTASTT----------AQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPDLLQEINANQALFLQMMNEP 285
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A6P7JCC0_9TELE (UV excision repair protein RAD23 n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7JCC0_9TELE)

HSP 1 Score: 96.3 bits (238), Expect = 7.360e-19
Identity = 113/309 (36.57%), Postives = 161/309 (52.10%), Query Frame = 0 
Query:    5 LLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDP---ASQQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVVAAGAGVRQQGGDDAMGGADA-EDGGAADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEP-PDA 307
            + +KT++ + F+V++ E+  +  +K +I + +G D    A  +LI  GK+L DD AL    +    F+V+MV K + A A P   XXXXXXXXXXXXXXXXXXX    XXXXXXXXX                                        G + D    EM+  MG+  +Q  AALRA+FN+  RA  YL+ GIP      G      G   ++ G  A   GG +  A        G GNPL+F+R  PQF  +R L+++N A+LP +LQ +  ++PEL+  I+ H + F++++NEP PDA
Sbjct:    3 ITLKTLQQQTFKVEIDEDETVKTLKERIEQEKGKDHFSVAGLKLIYAGKILSDDTALKEYKIDEKNFVVVMVTKPKTASAAPQXXXXXXXXXXXXXXXXXXXXXPAEQXXXXXXXXXKESSTAAEPPSTPVGSSGVSVSTNLINEAVSNLVT-----GPSYDAMVNEMML-MGYEREQVVAALRASFNNPDRAVEYLLTGIPGR--GQGHATGPDGESSSVSGTPALPTGGISIPANTGSSPSAGGGNPLSFLRNQPQFHVMRQLIQQNTALLPALLQEIGRENPELLREISNHQEQFIQMLNEPNPDA 303
[Close]
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Match: A0A7R8WJG9_9CRUS (UV excision repair protein RAD23 n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WJG9_9CRUS)

HSP 1 Score: 95.1 bits (235), Expect = 1.660e-18
Identity = 94/316 (29.75%), Postives = 148/316 (46.84%), Query Frame = 0 
Query:    5 LLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDPAS--QQLICGGKMLKDDDALAT-GVPAGGFLVLMVKKRRAAPAVPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVDPAS-------VEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEGIPDDVV--AAGAGVRQQGGDDAMGGADAEDGGAADLAEALMEMQGGEGNPLNFMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRLMNEPPDAA 308
            L  KT++ + F+V++  E K+S++K+KI + +G +  +  Q+LI  GK+L+D++A++T  +    F+V+M+ K  A P  P A          XXXXXXX                                                        GLA  PAS       V  +  MG+   +   ALRA+F +  RA  YL+ GIP + +  A+ AG   +GG+   G A A    A   +       GG  +PL F+R  PQF Q+R L+RENP++L  ++Q +   +PEL + I+QH   F+R++N+  D +
Sbjct:    3 LTFKTLQQKTFQVEIEGESKVSELKSKIEKEQGAEYVAGHQRLIYNGKILEDENAVSTYNIDPSKFIVIMLTK--AKPPPPKAEGNAGVASALXXXXXXXAPEGKKTDAAETKPSTTPSESSAPAAPRPASPTGSAAE------------------GLAPLPASRAEFDQMVNNIMEMGYSRPEVERALRASFLNPDRAVEYLVTGIPPEAMVDASSAGSAPRGGERGPG-AQAPASVATPPSGGQNPRPGGAEDPLAFLRTQPQFQQMRQLIRENPSLLNAIIQQIGRTNPELFQTISQHQAAFVRMINDDDDGS 297
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10007.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KET6_9PHAE1.220e-8869.03UV excision repair protein RAD23 n=2 Tax=Ectocarpu... [more]
A0A836CLA0_9STRA8.230e-2545.33UV excision repair protein RAD23 n=1 Tax=Tribonema... [more]
A0A1Y1XXG2_9FUNG2.220e-2141.67UV excision repair protein RAD23 n=1 Tax=Basidiobo... [more]
A0A1V9XA41_9ACAR2.680e-2132.50UV excision repair protein RAD23 n=1 Tax=Tropilael... [more]
A0A7M7J9X3_VARDE5.940e-2127.22UV excision repair protein RAD23 n=2 Tax=Varroa de... [more]
L8GWS2_ACACA9.830e-2136.45UV excision repair protein RAD23 n=1 Tax=Acanthamo... [more]
UPI001425B0E01.140e-1941.02UV excision repair protein RAD23 homolog B-like n=... [more]
A0A7S3P0B9_9STRA4.200e-1949.33Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A6P7JCC0_9TELE7.360e-1936.57UV excision repair protein RAD23 n=1 Tax=Parambass... [more]
A0A7R8WJG9_9CRUS1.660e-1829.75UV excision repair protein RAD23 n=1 Tax=Cyprideis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 162..199
e-value: 3.0E-10
score: 50.0
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 162..197
e-value: 6.7E-11
score: 41.9
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 160..200
score: 13.631
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 3..73
e-value: 7.1E-7
score: 38.8
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 5..75
e-value: 2.2E-9
score: 36.9
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 3..77
score: 13.228
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 247..290
e-value: 0.0061
score: 25.8
NoneNo IPR availableGENE3D3.10.20.90coord: 4..74
e-value: 6.6E-13
score: 50.2
NoneNo IPR availableGENE3D1.10.8.10coord: 162..203
e-value: 7.4E-15
score: 56.5
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 5..303
NoneNo IPR availablePANTHERPTHR10621:SF0AT15685P-RELATEDcoord: 5..303
IPR015360XPC-binding domainPFAMPF09280XPC-bindingcoord: 249..304
e-value: 2.4E-20
score: 72.0
IPR036353XPC-binding domain superfamilyGENE3D1.10.10.540coord: 239..305
e-value: 1.0E-21
score: 78.2
IPR036353XPC-binding domain superfamilySUPERFAMILY101238XPC-binding domaincoord: 245..311
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 4..81
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 156..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10007contigS-firma_F_contig10007:230..4597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10007.69.1mRNA_S-firma_F_contig10007.69.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10007 230..4604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10007.69.1 ID=prot_S-firma_F_contig10007.69.1|Name=mRNA_S-firma_F_contig10007.69.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=317bp
MSRSLLVKTIKGEAFRVDVAEECKMSDVKAKISEVRGDDPASQQLICGGK
MLKDDDALATGVPAGGFLVLMVKKRRAAPAVPAASAPAAAAAPVPAPTPA
AAAAAAAPPAPVAAAAAAAATPAATPASAPAPSPPPPAAAGAGAGAGAAA
GGGGGGDGLAVDPASVEMLTAMGFPEDQATAALRAAFNDVSRAASYLMEG
IPDDVVAAGAGVRQQGGDDAMGGADAEDGGAADLAEALMEMQGGEGNPLN
FMRFHPQFDQLRNLVRENPAMLPQVLQGLANQSPELIERINQHPDDFLRL
MNEPPDAAGQAMMDMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR029071Ubiquitin-like_domsf
IPR036353XPC-bd_sf
IPR015360XPC-bd
IPR006636STI1_HS-bd
IPR000626Ubiquitin_dom
IPR015940UBA