mRNA_S-firma_F_contig10881.1174.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A6H5KPH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE) HSP 1 Score: 566 bits (1460), Expect = 2.340e-193 Identity = 272/287 (94.77%), Postives = 282/287 (98.26%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATSSSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPLV 861
PKVTVILNLFMREVLTEQLDSLFAQTTASHI+EVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYL Q+MHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDNAVPVDYLCSQWFLRPEWLQ+MWSERPMTFETGEDFH+SHT+RKYANIGTYVMP+ S+D+ETKGSKFRGLSFVNAATSSSDVPLRD LWM ALKAGSRMRWMDMFTAEEAHVDP ALL+IRTEADVRAL+PLV
Sbjct: 242 PKVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDNAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTLRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSSSDVPLRDMLWMGALKAGSRMRWMDMFTAEEAHVDPAALLIIRTEADVRALVPLV 528
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: D8LPR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR2_ECTSI) HSP 1 Score: 469 bits (1206), Expect = 1.120e-162 Identity = 222/233 (95.28%), Postives = 231/233 (99.14%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATSS 699
PKVTVILNLFMREVLTEQLDSLFAQTTASHI+EVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWL+DDDMIPGNKYL Q+MHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQD+AVPVDYLCSQWFLRPEWLQ+MWSERPMTFETGEDFH+SHTMRKYANIGTYVMP+ S+D+ETKGSKFRGLSFVNAATSS
Sbjct: 228 PKVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLIDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDSAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSS 460
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A1J3I729_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I729_NOCCA) HSP 1 Score: 211 bits (536), Expect = 1.090e-62 Identity = 113/264 (42.80%), Postives = 158/264 (59.85%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMF 777
PKVTVILN F R+ L QLDSL QT H VWV F +P + R+ + + S+++FK+YGRFQ+AL D V+++DDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D D + VD+L S WFL E ++ ++ E+P TF TGED H+S+ ++KY N G++V+P ND ET G L++V+ T + V +RD W AL G +W M+
Sbjct: 87 PKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLAFGSPNEASLRRIAGSYNDSRISFISSNYDFKYYGRFQIALQTEADLVYVIDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITLDRILQVDFLSSSWFLSAELVKALFIEKPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKNIVEVRDNQWWKALSTGYITQWAAMY 348
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A7N0TYA9_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TYA9_KALFE) HSP 1 Score: 222 bits (565), Expect = 1.300e-62 Identity = 127/291 (43.64%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
PKVTVILN F R+ L QLDSL QT H VWV F +P + R+V + + S ++FK+YGRFQMAL +D V++VDDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D D V VD+L S WFL E ++ ++ E PMTF TGED H+S+T++KY N G+YV+P ++D ET G L++V+ T V +RD W AL G +W M +D A+ + ++VRAL PL
Sbjct: 185 PKVTVILNHFKRKTLCAQLDSLLRQTLGFH--HVWVLAFGSPNANTLSRIVSSYNDSRISFISSQYDFKYYGRFQMALQTESDLVYIVDDDMIPGTKMLQILSHVAGTEKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIIVDKIVQVDFLSSSWFLSAELIRTLFVEAPMTFMTGEDLHLSYTLQKYRNAGSYVLPVDASDKETWGDSEHRLAYVSETTVIFKGTVQVRDDQWWKALSTGYVTQWAAM---NPQKID--AMFYAHSVSEVRALAPL 468
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A067LHF7_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LHF7_JATCU) HSP 1 Score: 217 bits (553), Expect = 5.720e-61 Identity = 126/291 (43.30%), Postives = 171/291 (58.76%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWDQ--DNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
PKVTVILN F R+ L QLDSL QT H VWV F +P + R+V+ + + S ++FK+YGRFQMAL D V++VDDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D D V VD+L S WFL E ++ ++ E PMTF TGED H+S+ ++KY N G++V+P ND ET G L++V+ T V +RD W AL G +W M+ + +D AL + +V+AL PL
Sbjct: 175 PKVTVILNHFKRKTLCAQLDSLLQQTLPFH--HVWVLAFGSPNEVSLKRIVQSYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSAELVKTLFVEAPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQK---ID--ALFYAHSVDEVKALAPL 458
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: UPI000900D020 (uncharacterized protein LOC109173525 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI000900D020) HSP 1 Score: 217 bits (552), Expect = 8.360e-61 Identity = 126/291 (43.30%), Postives = 169/291 (58.08%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
PK+TVILN F R+ L QLDSL QT H VWV F +P + R+V+ + + S ++FK+YGRFQMAL D V++VDDDMIPG K L + H AGTE +S+LGSIGR+LP +D S SYRK+ S G+Y+PD +D D V VD+L S WFL E ++ +++E P TF TGED H+S+ ++KY N G++V+P ND ET G L++V+ T V +RD W AL G +W M +D AL + DV+AL PL
Sbjct: 184 PKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPNEQTLRRIVESYNDTRISFISSGYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILAHVAGTEKYQNSVLGSIGRILPFRQKDFSFPSYRKFRSKEAGLYLPDPAYDILVDRIVQVDFLSSSWFLSAELIKTLFTETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAM---NPQKID--ALFYAHSMDDVKALAPL 467
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A6N2LP55_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LP55_SALVM) HSP 1 Score: 214 bits (546), Expect = 1.140e-60 Identity = 127/290 (43.79%), Postives = 170/290 (58.62%), Query Frame = 1
Query: 4 KVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
KVTVILN F R+ L EQ+DSL QT H VWV F +P + R+V + V S ++FK+YGRFQMAL D V++VDDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D D V VD+L S WFL E ++ ++ E PMTF TGED H+S+ ++KY N G++V+P ND ET G L++V+ T V +RD W AL AG +W M + +D A+ + +VRAL PL
Sbjct: 16 KVTVILNHFKRKTLCEQIDSLLHQTLPFH--HVWVLSFGSPNELSLKRIVDSYNDSRISFVSSSYDFKYYGRFQMALQTEADLVYVVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIEAPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQIRDDQWWKALSAGYVTQWAVMHPQK---ID--AIFYAHSVDEVRALAPL 298
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A0K9RUQ5_SPIOL (Uncharacterized protein n=3 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RUQ5_SPIOL) HSP 1 Score: 215 bits (548), Expect = 2.770e-60 Identity = 125/291 (42.96%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
PKVTVILN F R+ L QLDSL QT H VWV F +P + R+V+ + V S+++FK+YGRFQMAL D V++VDDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D + V VD+L S WFL E ++ ++ E PMTF TGED H+S+ ++KY N G++V+P D ET G L++V+ T V +RD W AL +G +W M+ + +D AL + +V+AL PL
Sbjct: 172 PKVTVILNHFKRKTLCAQLDSLLQQTLPFH--HVWVLAFGSPNELLLRRIVQSYNDSRISFVSSNYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDILVEKVVQVDFLSSSWFLSAELVKTLFIENPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWRALSSGYVTQWAAMYPQK---ID--ALFYAHSIEEVKALSPL 455
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A6I9U624_SESIN (uncharacterized protein LOC105170283 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U624_SESIN) HSP 1 Score: 214 bits (546), Expect = 5.410e-60 Identity = 124/291 (42.61%), Postives = 169/291 (58.08%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWDQ--DNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
PKVTVILN F R+ L QLDSL QT H VWV F +P + R+V + + S ++FK+YGRFQMAL D V+++DDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D D V VD+L S WFL E ++ ++ E P TF TGED H+S+ ++KY N G++V+P ND ET G L++V+ T V +RD W AL G +W M+ + +D AL + +V+AL PL
Sbjct: 176 PKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLSFGSPNEQSLKRIVDSYNNSRISFISSSYDFKYYGRFQMALQTEADLVYILDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIDRVVQVDFLSSSWFLSAELIKTLFIETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYITQWAAMYPQK---ID--ALFYAHSVEEVKALSPL 459
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Match: A0A803M3J0_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803M3J0_CHEQI) HSP 1 Score: 214 bits (545), Expect = 5.780e-60 Identity = 125/291 (42.96%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 1 PKVTVILNLFMREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQVMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QDNAVPVDYLCSQWFLRPEWLQYMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYKSNDDETKGSKFRGLSFVNAATS--SSDVPLRDQLWMAALKAGSRMRWMDMFTAEEAHVDPTALLVIRTEADVRALLPL 858
PKVTVILN F R+ L QLDSL QT H VWV F +P + R+V+ + V S+++FK+YGRFQMAL D V++VDDDMIPG K L + H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D + V VD+L S WFL E ++ ++ E PMTF TGED H+S+ ++KY N G++V+P D ET G L++V+ T V +RD W AL +G +W M+ + +D AL + +V+AL PL
Sbjct: 177 PKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLAFGSPNELSLRRIVQSYNDSRISFVGSNYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDILVEKVVQVDFLSSSWFLSAELVKTLFIENPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDVVQVRDDQWWRALSSGYVTQWAAMYPQK---ID--ALFYAHSINEVKALAPL 460 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10881.1174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10881.1174.1 >prot_S-firma_F_contig10881.1174.1 ID=prot_S-firma_F_contig10881.1174.1|Name=mRNA_S-firma_F_contig10881.1174.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=277bp MREVLTEQLDSLFAQTTASHISEVWVCVFSAPAQDYALRVVKESKYKNVRback to top mRNA from alignment at S-firma_F_contig10881:2100..4215+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10881.1174.1 ID=mRNA_S-firma_F_contig10881.1174.1|Name=mRNA_S-firma_F_contig10881.1174.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2116bp|location=Sequence derived from alignment at S-firma_F_contig10881:2100..4215+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10881:2100..4215+ >mRNA_S-firma_F_contig10881.1174.1 ID=mRNA_S-firma_F_contig10881.1174.1|Name=mRNA_S-firma_F_contig10881.1174.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1662bp|location=Sequence derived from alignment at S-firma_F_contig10881:2100..4215+ (Sphaerotrichia firma ET2_F female)back to top |