mRNA_S-firma_F_contig10828.1109.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A813C532_9DINO (TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C532_9DINO) HSP 1 Score: 290 bits (742), Expect = 1.370e-95 Identity = 151/237 (63.71%), Postives = 187/237 (78.90%), Query Frame = 1
Query: 28 EAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDGRLTFTQYLKAVNVRLPKNQDKGKK 738
E E PKDVT+NE KEL RV+++LC+F+PK+K+ + PKLERKQKIL +KKNP+A+++ D+ G EL+ + +DAEL + E++ ++EA I I + KKV DL +AL LGK+S+KKE+EDMIWEVDENLDGCVDWEEF LMFQRNIKD TG EPFQLFNVVQFMMYD SG V+VDETMHMLYARYGK RLE EMK LFGD L +G+G LTF YLKAV+VR+P++ G+K
Sbjct: 26 EPEAPKDVTANELKELERVFEFLCDFAPKNKLNNLLKPKLERKQKILSYKKNPEAVKLEDDTGRELSDDLIDAELQRLEEEIGDIEAQINTIKSKQDKKVKPKDLQEALAFLGKRSSKKEIEDMIWEVDENLDGCVDWEEFQLMFQRNIKDTTGKEPFQLFNVVQFMMYDVDFSGEVSVDETMHMLYARYGKARLEREMKALFGDKLH-NGNGTLTFLDYLKAVSVRVPRDPRLGRK 261
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A5A8DI08_CAFRO (EF-hand domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DI08_CAFRO) HSP 1 Score: 290 bits (741), Expect = 1.490e-95 Identity = 149/244 (61.07%), Postives = 187/244 (76.64%), Query Frame = 1
Query: 4 AAWVAMSKEAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDGRLTFTQYLKAVNVRLPKNQDKGK 735
AA A S EPKDVT +E K+L RV++YLC+F+ K+K+ K+ PKLERK KIL +KKNP+A++I+DE G EL+PE++D EL I+++ ++ I +I+A KK+ DL++AL LGKK+TKKE+EDMIWEVDENLDGCVDWEEF LMF RNIKD TGLEP QLFNVVQFMMYD+ G V+VDETMHMLY+RYG++ L++EM+ LFGD L A GD RLTF QYL AV +LPK GK
Sbjct: 2 AAVAAASSGKPEPKDVTQDESKQLERVFNYLCDFAAKNKLFKEREPKLERKSKILAYKKNPEAVKIIDETGRELSPEEIDFELRKIDDECADITQRIEKIEAKEEKKIKPRDLLEALGKLGKKATKKEIEDMIWEVDENLDGCVDWEEFQLMFHRNIKDTTGLEPHQLFNVVQFMMYDKDCGGQVSVDETMHMLYSRYGREGLDSEMRNLFGDSLSATGDARLTFEQYLAAVERKLPKRIRGGK 245
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A7R9ZF54_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZF54_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.550e-81 Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 1
Query: 337 DLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDGRLTFTQYLKAVNVRLPKNQDKGKKSGRGRSR 759
DLMDALKALGK+STKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDR+NSGAV+VDETMHMLYARYGKDRLEAEMK LFGDDL+ADGDG LTFTQYL+AVNVRLPK + K K + R R R
Sbjct: 2 DLMDALKALGKRSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRTNSGAVSVDETMHMLYARYGKDRLEAEMKALFGDDLKADGDGCLTFTQYLEAVNVRLPKVEPKKKATSRRRRR 142
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A2R5GQD3_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQD3_9STRA) HSP 1 Score: 241 bits (615), Expect = 1.100e-76 Identity = 116/228 (50.88%), Postives = 169/228 (74.12%), Query Frame = 1
Query: 19 MSKEAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRA-DGDGRLTFTQYLKAV 699
M+ +AE K ++ NEEKEL RVY+ +CN+ PK K+ + P+ R+ +++ +K PD I + ++ G ++ E+++AE + + +++ LE +A +D+DP +++ DL + LK LGK ++KKE+E+MIWEVDE+LDG VDWEEF L +QRN+ D TGLEP QLFNV+QFM+YD+ SG VTVDETMHMLY RYG+DRLE +MK+LFG+DL DGDG L+F++Y A+
Sbjct: 1 MTADAEGSKGISQNEEKELLRVYNTMCNYQPKSKLYARLQPQRARRDRLVAHRKAPDNIVVTNKEGEAMSSEEIEAEYETLRQEIAALEKEVAVLDSDPQRRIRPADLAECLKTLGKPNSKKEIEEMIWEVDESLDGVVDWEEFKLTYQRNLADTTGLEPCQLFNVIQFMIYDKDGSGKVTVDETMHMLYTRYGRDRLEGQMKLLFGEDLSTQDGDGELSFSEYCVAI 228
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A7S2UTN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTN0_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.720e-63 Identity = 121/256 (47.27%), Postives = 172/256 (67.19%), Query Frame = 1
Query: 19 MSKEAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKIL---QFKKNPDAIRI---VDEAGVELTPEQLD------AEL------------DIINE---QLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGD--GRLTFTQYLKAV 699
M +E + P+++T EE+EL R Y++LC+F + K+ K+ APK R+Q+++ Q K IR +++ G L +Q+D A+L D IN+ +++ +E+ I + +DP KK+ A DLM+AL+ LGKK TKKEV DMIWEVDENLDGCVDWEE+ LMFQRNI D+TGLEP +L+N+VQFM+YD N G V+VD+TM+MLYARYG+ R+E +++ LFG D+R +G G + F YL+AV
Sbjct: 2 MQEEEDVPQNITPQEERELVRTYNHLCHFLKRSKLEKEAAPKRARRQELIDKVQTSKKIHEIRQQQELEQNGSALAQQQIDELDSSYADLAPMGSVEMAQMQDDINQLTAEINGIESQIEALRSDPDKKIRAPDLMEALRFLGKKVTKKEVADMIWEVDENLDGCVDWEEYRLMFQRNIFDRTGLEPSKLYNMVQFMIYDHDNKGLVSVDQTMNMLYARYGRSRMEQKLRELFGTDMRENGKQGGEIDFLTYLQAV 257
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: K3WSY1_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSY1_GLOUD) HSP 1 Score: 194 bits (492), Expect = 3.500e-58 Identity = 105/222 (47.30%), Postives = 143/222 (64.41%), Query Frame = 1
Query: 34 EEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDGRLTFTQYLKAV 699
+E K + + EE+ELRRV+D++ ++ K KI MA ERKQ++ K NPD +++E G+++ E+LD E+ I LD+ A ++ I + K + DL +A+K LGK +KKE+ DMIWE DENLDG VDW+E MF RN+ DKT LEP LFNVVQFM YD+ N G +T D+TM +L+ARYG+ +LE MK LFGD LTF YL+ V
Sbjct: 6 DEAKPMIAQEERELRRVFDHVASYRQKKKILTAMAASRERKQRLEASKANPDLSPMLNEKGIKMGDEELDDEIKKIEHGLDKAAAELSAIQSSVTKFIKNEDLYEAIKTLGKVCSKKEIADMIWEADENLDGVVDWDELRAMFNRNLLDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGDS------DELTFVNYLERV 221
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A8K1CT54_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT54_PYTOL) HSP 1 Score: 193 bits (491), Expect = 4.960e-58 Identity = 106/241 (43.98%), Postives = 150/241 (62.24%), Query Frame = 1
Query: 19 MSKEAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDGRLTFTQYLKAVNVRLPKNQDKGKKS 741
M +E K + + EE+ELRRV+D+L ++ K +I +A ER+ ++ + NPD +V+E G+++T E++D EL ++ L++ ++ I + K + DL DA+KALGK +KKEV DMIWE DENLDG VDW+E MF RN+ DKT LEP LFNVVQFM YD+ N G +T D+TM +L+ARYG+ +LE MK LFGD L+F YL+ V + N + KS
Sbjct: 1 MMSVTDETKGMIAQEERELRRVFDHLASYRQKKRINASIATSKERRARLEASRANPDVSGLVNEKGIKMTREEIDEELRKVDFNLEKHMTELSAIQSSTNKHIKNEDLYDAIKALGKVCSKKEVSDMIWEADENLDGVVDWDELRSMFNRNLMDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGDS------DELSFVNYLERVGKQRQMNAEARSKS 235
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A2D4BK57_PYTIN (Outer dynein arm-docking complex subunit 3 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK57_PYTIN) HSP 1 Score: 193 bits (491), Expect = 6.330e-58 Identity = 105/237 (44.30%), Postives = 152/237 (64.14%), Query Frame = 1
Query: 31 AEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDGRLTFTQYLKAVNVRLPKNQDKGKKS 741
++E K + + EE+ELRRV+D+L ++ K K+ +A ER+ ++ K NPD +V++ GV++T E+++ EL I+ L++L +A + ++PA+ + DL DA+KALGK +KKE+ DMIWE DENLD VDW E M RN+ DKT LEP LFNVVQFM YD+ N G +T D+TM +L+ARYG+ +LE MK LFGD L+F YL+ V + +N + KS
Sbjct: 13 SDENKGMIAQEERELRRVFDHLASYRQKRKLNATIAAAKERRARLEAGKANPDVSALVNDKGVKMTREEIEEELRKIDYNLEKLSNELAVVQSNPARHIKNEDLYDAIKALGKVCSKKEISDMIWEADENLDSVVDWXELRAMXNRNLMDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGDS------DELSFVNYLERVGRQRRQNAEARGKS 243
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A6S9HP31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HP31_HETAK) HSP 1 Score: 188 bits (478), Expect = 1.880e-55 Identity = 111/256 (43.36%), Postives = 168/256 (65.62%), Query Frame = 1
Query: 19 MSKEAEEP-KDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLER----KQKILQFKK-NPDAIRIVDEAGVELTPEQLD-----------------AELDIINEQLDELEAAIAEIDADPA----KKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGD--GRLTFTQYLKAV 699
M + EEP +T EE+ELRRV++ LC+F K ++ + + P++ER K+K +++ P+ + ++E TPEQL+ AE ++ ++++ A +A ++ PA +K+ DL++A + LG+ +T+K+V+D+IWEVDENLDG VDWEEF LMF+RN+ D+TGLEP QL+++ QFMMYD N+G VTVD+TM MLYARYGK ++EA++K+LFG D++ G G +TF QYL AV
Sbjct: 2 MDTQEEEPIVPMTQQEERELRRVFERLCDFHKKMRLAQAIEPRVERMDELKKKYTVYEEPEPEDVWKMEEK----TPEQLEREREARGRLEIPEGPERAEWATLSAEVEQHRAELAALERPPAGAPEQKIRPADLLEAARFLGRPATRKDVQDVIWEVDENLDGAVDWEEFRLMFERNVGDRTGLEPAQLYHMAQFMMYDARNTGRVTVDQTMSMLYARYGKAKMEAKLKILFGRDMKESGTEGGAITFQQYLMAV 253
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Match: A0A8J2X371_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X371_9STRA) HSP 1 Score: 182 bits (463), Expect = 3.080e-53 Identity = 99/226 (43.81%), Postives = 144/226 (63.72%), Query Frame = 1
Query: 28 EAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILQFKKNPDAIRIVDEAGVELTPEQLDAELDIINEQLDELEAAIAEIDADPAKKVHAMDLMDALKALGKKSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRSNSGAVTVDETMHMLYARYGKDRLEAEMKMLFGDDLRADGDG--RLTFTQYLKAV 699
E E ++T EE +LRRV+ LC++ K K+ K + PK ++ +K+ Q + A +V +E+ + +++L + EI+ V +DL++ALK LG+K+ KK+ E MIWEVDE+LDGCV W+E LMFQRNI+D TGLEP QLFNVV F+++D G V+VDETM +LYARYG+ ++E +KMLFGDD++ +G G + F YL+AV
Sbjct: 5 EGNEAAEITPQEENQLRRVHRLLCDYGAKKKVLKLLRPKQDQLEKLRQSADDEQADILVA------------SEIQSLETDVEKLRQDLQEIEKKSDGLVSCVDLLEALKTLGRKAQKKDAEAMIWEVDEDLDGCVSWDEMRLMFQRNIRDTTGLEPSQLFNVVMFLIFDLDEDGMVSVDETMELLYARYGRHKMEDRLKMLFGDDMKEEGKGGGEIDFVTYLRAV 218 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10828.1109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10828.1109.1 >prot_S-firma_F_contig10828.1109.1 ID=prot_S-firma_F_contig10828.1109.1|Name=mRNA_S-firma_F_contig10828.1109.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=250bp MSKEAEEPKDVTSNEEKELRRVYDYLCNFSPKHKIRKDMAPKLERKQKILback to top mRNA from alignment at S-firma_F_contig10828:2040..2984+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10828.1109.1 ID=mRNA_S-firma_F_contig10828.1109.1|Name=mRNA_S-firma_F_contig10828.1109.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=945bp|location=Sequence derived from alignment at S-firma_F_contig10828:2040..2984+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10828:2040..2984+ >mRNA_S-firma_F_contig10828.1109.1 ID=mRNA_S-firma_F_contig10828.1109.1|Name=mRNA_S-firma_F_contig10828.1109.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1500bp|location=Sequence derived from alignment at S-firma_F_contig10828:2040..2984+ (Sphaerotrichia firma ET2_F female)back to top |