mRNA_S-firma_F_contig10815.1091.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10815.1091.1
Unique NamemRNA_S-firma_F_contig10815.1091.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A0G4J8X2_PLABS (Ion_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8X2_PLABS)

HSP 1 Score: 201 bits (511), Expect = 3.350e-58
Identity = 114/251 (45.42%), Postives = 180/251 (71.71%), Query Frame = 1
Query:   16 LKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISC-SFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            L+ +IW L+DDPSSS +A+A +I ++A I+++  A ++E+ P     D +++  IE   V+ FT+E  +R +SC  +G +   REP+N VD++AIAP+Y+E  + S  + S+S  RXXXXXXXXXXXX SRY+ W+ VF   I+VSA PL M+ ++  + +++FS+ +YY ERGT +    I+    G+PSP+ SIPA+ W+ ++T+TT+G+GD+VPI+  G+ IAG+A++ G+L+LAIPI++I+A+F SE
Sbjct:   59 LRQRIWALVDDPSSSTVAQALAISIMALIVLTGVAFILETVPGEASIDPNVWNTIETICVVCFTIELAVRLLSCPDYGAY--IREPMNWVDIIAIAPWYVETFVTSSGASSSSVFRXXXXXXXXXXXXXSRYITWISVFSNAIRVSAHPLAMLLYIMALALVLFSTAMYYAERGTLNAVTNIWERPDGSPSPYYSIPATFWWCIITITTVGYGDVVPITGTGRFIAGLAALCGILVLAIPITIISANFNSE 307          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S1C5H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5H7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.630e-57
Identity = 119/256 (46.48%), Postives = 172/256 (67.19%), Query Frame = 1
Query:    4 EWVKLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSS--LRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            E + L+ +IW L+DDP SS  A+  ++ V+A I +S T  V+E+ PQ H   S ++  IE F +I FT+EY+ R ++C   +  F +  LN +D+VAIAP+Y+EL L      S SS   R  XXXXXXXXXXISRY++W+K+F   +  SA PLGM+ F+  I  IVFSS ++Y ERGT+ +   +++ D G  SP+ SIPAS W+ ++TMTT+G+GD  P++  GKLIA + S+ G+L+LAIPI+VI+ +F  E
Sbjct:   35 EELTLQQRIWALVDDPGSSQWAQIIAVWVMALIGLSCTTFVLETLPQFHRQQSGVWDAIETFCIINFTLEYVTRLVTCP-EKIPFLKGVLNIIDLVAIAPWYIELALSEPGDDSGSSAVFRVVXXXXXXXXXXISRYLSWVKIFASAMYQSAQPLGMLLFIMAIGTIVFSSAIFYAERGTWSDAEEVWLRDDGTASPYQSIPASFWWCIITMTTVGYGDDYPVTVTGKLIAAVTSLCGILVLAIPITVISTNFNEE 289          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S2S5R2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S5R2_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.680e-52
Identity = 112/253 (44.27%), Postives = 170/253 (67.19%), Query Frame = 1
Query:   16 LKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHH---DTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            LK ++W  +DDPSSS  A+ FS+ ++  I  SV    +ES P  +   + D+S++  IE   VI+FTVEY+LR ISC   + +F +  LN +D+ AI PFYLE       +++++  R  XXXXXXXXXX SRY++W+ +F   +  SA PL M+ FV  I  + FSS ++++E+G FDE   +Y+ + G  SP+ SIPA+ W+ +VTMTT+G+GD+ PI+  GKL+A +AS++G+L+LAIPI++I+ +F  E
Sbjct:   74 LKQRMWAFLDDPSSSDGAQIFSLALMMVITFSVVVFCLESLPMFYLDAEDDNSIWAWIETICVIIFTVEYVLRLISCP-NKLKFLKSVLNTIDLAAIVPFYLEKYF----TVNSAVFRVVXXXXXXXXXXXSRYLSWISIFMEAMIQSAQPLTMLLFVMMIGCVFFSSAMFFIEKGEFDEVNEVYMRE-GKESPFQSIPATFWWCLVTMTTVGYGDVYPITPAGKLVASLASLTGILVLAIPITIISTNFSVE 320          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A0H5RRS8_9EUKA (Ion_trans domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RRS8_9EUKA)

HSP 1 Score: 181 bits (460), Expect = 4.600e-51
Identity = 113/250 (45.20%), Postives = 165/250 (66.00%), Query Frame = 1
Query:   16 LKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            L+ +I+ L DDP SS  A+  SI +   I +S  A V+E+ P+  D D  ++ VIEL SV +F+ E+L+R  SC      F R+ LN +D ++IAP+YLE +    +  S++  R  XXXXXXXXXXISRY+ W+KVF   I+ SA  L M+ +V  + +IVFS+ ++Y ERG  D   ++Y  D G  SP+ SI AS W+ V+TMTT+G+GD VPI+  G+ IA + S+ G+L+LAIPI++I+A+F +E
Sbjct:   46 LRQRIFALFDDPGSSIWAQVVSIAMSICICISCAAFVLETVPELADVDEGIWNVIELASVAIFSGEFLIRIASCP-NLLAFVRDTLNFIDFISIAPYYLERLFLDASFSSSAVFRVVXXXXXXXXXXISRYVTWIKVFSDAIRSSAHALAMLLYVMAVALIVFSTAMFYAERGRVDPVTKMYFRDDGVRSPFYSIVASFWWCVITMTTVGYGDDVPITFTGRFIAVITSLCGILVLAIPITIISANFNAE 294          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S1CET9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CET9_9STRA)

HSP 1 Score: 185 bits (470), Expect = 7.510e-51
Identity = 111/247 (44.94%), Postives = 167/247 (67.61%), Query Frame = 1
Query:   28 IWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVF-YGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            +W  MDDPS S LAR  S+ ++  I +S+ A +++S P+      +L   IE F ++VFT+E+L+R ++       FAR  LN +D+++I PFYLE +LG  +S +TS LR     XXXXXXX SRY++W+K+  Y  IK S APLGM  F+  I  ++  S +YY+ERGT+D  LR+YI D G  + + SIP + W+ V+TMTT+G+GD++P++  GKL+A + S+SG+++LAIPISV +A+F  +
Sbjct:  121 VWTTMDDPSFSPLARVISLFIMFLIFVSIVAYILDSMPELRSAAGTLDD-IETFCIVVFTIEFLVRLLATP-DLIAFARGVLNWIDLISILPFYLERVLGGNSS-ATSVLRIFRLVXXXXXXXXSRYISWIKLISYAVIK-SLAPLGMAIFITLIATVILGSAMYYIERGTWDPHLRVYITDGGVETDFVSIPEACWWCVITMTTVGYGDVLPVTPLGKLLACITSLSGIVLLAIPISVFSANFAKQ 363          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A5A8CUP7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUP7_CAFRO)

HSP 1 Score: 174 bits (440), Expect = 4.730e-48
Identity = 115/260 (44.23%), Postives = 159/260 (61.15%), Query Frame = 1
Query:    4 EWV-----KLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSP-WDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            +WV     +++A +W L+DDP+SS  ++  S  ++A I++SVT  VVE+ P  H     LF  IE   +I F +E+ LR +SC     +F  + +N +D VAI PF+LEL +   T   T+ +R     XXXXX  +SRY+AWL+VF  T+  S APLGMI FV G++VI+ SS  Y+ ERG                SP +DSIP SMW+ VVTMTTIGFG  VP +  GKL+  +A+  GV++LAIPISVI  +F+ E
Sbjct:  166 QWVIAQVGRVRAAVWELLDDPASSWASQLISWWLMAAIIVSVTTFVVETVPGVHRQHDQLFSNIESVCMIHFVIEFALRLLSCP-NLVKFGTDVMNIIDFVAILPFFLELAMQGDTQ-GTAVIRAVRLVXXXXXVKVSRYLAWLRVFAATVHASVAPLGMILFVIGLLVILLSSAAYFAERGE---------------SPGFDSIPESMWWCVVTMTTIGFGRSVPRTLLGKLVGSIAATCGVVILAIPISVIATNFQLE 408          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A5A8CP70_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP70_CAFRO)

HSP 1 Score: 174 bits (440), Expect = 4.100e-47
Identity = 115/260 (44.23%), Postives = 159/260 (61.15%), Query Frame = 1
Query:    4 EWV-----KLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSP-WDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            +WV     +++A +W L+DDP+SS  ++  S  ++A I++SVT  VVE+ P  H     LF  IE   +I F +E+ LR +SC     +F  + +N +D VAI PF+LEL +   T   T+ +R     XXXXX  +SRY+AWL+VF  T+  S APLGMI FV G++VI+ SS  Y+ ERG                SP +DSIP SMW+ VVTMTTIGFG  VP +  GKL+  +A+  GV++LAIPISVI  +F+ E
Sbjct:  166 QWVIAQVGRVRAAVWELLDDPASSWASQLISWWLMAAIIVSVTTFVVETVPGVHRQHDQLFSNIESVCMIHFVIEFALRLLSCP-NLVKFGTDVMNIIDFVAILPFFLELAMQGDTQ-GTAVIRAVRLVXXXXXVKVSRYLAWLRVFAATVHASVAPLGMILFVIGLLVILLSSAAYFAERGE---------------SPGFDSIPESMWWCVVTMTTIGFGRSVPRTLLGKLVGSIAATCGVVILAIPISVIATNFQLE 408          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S4BK27_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BK27_CHRCT)

HSP 1 Score: 161 bits (407), Expect = 1.270e-43
Identity = 105/252 (41.67%), Postives = 162/252 (64.29%), Query Frame = 1
Query:    1 TEWVKLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASF 756
            + W KL+ ++++ +++PS S LA   S +++  I +S  A ++ SYP     DS +  V+E+  VI+FTVEY LRF      R  F  +  N +D++AIAPFY+E++LG   ++    LR XXXXXXXXXXX SR M    V  G   V    L  + FV G   ++F+SLL+Y E+G +DE+   +I   G+ SP+  IP ++W+ +VTMTT+G+GD+VP+ + G+++A  A V+GVL+LA+P+SV+ A+F
Sbjct:   56 SRWGKLRHEVYLTLNEPSYSRLAMVVSNLIMVAIFISTVAFILGSYPDL--ADSHILKVLEVVVVILFTVEYGLRFAVYEGNRCNFVLDAFNLIDLMAIAPFYIEMVLGD--AVGGGVLRVXXXXXXXXXXXHSRDMQMFVVCMGN-SVQGLKLLFVLFVLG--ALIFASLLWYCEKGLYDEQAGAFIRSDGSESPFSDIPTTLWWAIVTMTTVGYGDMVPVETSGRVVATFAMVAGVLVLALPLSVVGANF 300          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A482RH94_9ARCH (Ion transporter (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RH94_9ARCH)

HSP 1 Score: 157 bits (398), Expect = 1.740e-43
Identity = 97/243 (39.92%), Postives = 159/243 (65.43%), Query Frame = 1
Query:   37 LMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
            ++D P+SS +A   +  +VA IL+SV   + +SYP+  + +   F  IELF VIVFT+EY +R + C+     F     N VD+++IAP+Y+EL+ G+          XXXXXXXXXXX I RY+ WL++F  TI+ SA  L M+ F+ G++++ +++L+Y+ ERG +D +  ++  + G+P+ ++SIPA  W ++V+M+ +GFGD+   ++ G+LI G A  SG++MLA+P+ +IT    +E
Sbjct:    3 IVDQPNSSYMATLVAYFLVAVILLSVGVFIADSYPEVAEANDRAFNAIELFCVIVFTIEYGVRCL-CAPEPRRFIFSFFNVVDLLSIAPYYIELMFGASGGSXXXXXXXXXXXXXXXXXKIGRYVTWLQIFGVTIQRSANALCMLFFIVGLLILFWATLVYFAERGAWDVDRGVWQREDGSPTSFESIPAVAWCIIVSMSVVGFGDMAATTAVGRLITGAAIFSGIVMLAVPVPIITGYLHTE 244          
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A2R5GM09_9STRA (Potassium voltage-gated channel protein Shaker n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM09_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.530e-43
Identity = 98/236 (41.53%), Postives = 154/236 (65.25%), Query Frame = 1
Query:   28 IWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDT----DSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSL-RXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLM 720
            IW  +DDPSSS  A+ +S+ ++  I  SV    VES P+ ++     + +++  IE   V++FT EY+LR  +C   +  F R+ LN VD++AI PFYLE     L     +++ R  XXXXXXXXXXISRY++W+++F   ++ S  PL M+ FV  +  + FSS ++++ERG FD +  +Y+   G+ SP+ SIPA+ W+ +VTMTT+G+GD+ PI+  GKL+A + S++G+L+
Sbjct:   63 IWRFLDDPSSSKAAQCYSVALMGLITFSVVVFCVESLPRFYEESQGDEETIWDRIEFCCVVIFTSEYVLRLFTCP-SKSAFLRDFLNFVDLIAIVPFYLERAASYLLLPGDAAVFRVVXXXXXXXXXXISRYLSWIRIFVVAMQNSTQPLTMLLFVMMVGCVFFSSGMFFLERGDFDLDRGVYLRSDGSESPFQSIPATFWWCLVTMTTVGYGDVYPITPGGKLLATVTSLAGILV 297          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4J8X2_PLABS3.350e-5845.42Ion_trans domain-containing protein n=1 Tax=Plasmo... [more]
A0A7S1C5H7_9STRA1.630e-5746.48Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2S5R2_9STRA4.680e-5244.27Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0H5RRS8_9EUKA4.600e-5145.20Ion_trans domain-containing protein n=1 Tax=Spongo... [more]
A0A7S1CET9_9STRA7.510e-5144.94Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8CUP7_CAFRO4.730e-4844.23Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CP70_CAFRO4.100e-4744.23Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S4BK27_CHRCT1.270e-4341.67Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A482RH94_9ARCH1.740e-4339.92Ion transporter (Fragment) n=1 Tax=archaeon TaxID=... [more]
A0A2R5GM09_9STRA3.530e-4341.53Potassium voltage-gated channel protein Shaker n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10815contigS-firma_F_contig10815:2482..3468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog529818.AMSG_01858T0
PFAMsIon_trans
Max annot lvl2759|Eukaryota
KEGG koko:K04874
KEGG TC1.A.1.2.12,1.A.1.2.6
Evalue1.04e-39
EggNOG OGsCOG2126@1|root,KOG1545@2759|Eukaryota
Descriptionvoltage-gated potassium channel activity
COG categoryJ
BRITEko00000,ko04040
Hectar predicted targeting categorysignal anchor
Exons5
Model size765
Cds size765
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10815.1091.1prot_S-firma_F_contig10815.1091.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10815 2482..3468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815624.4619038-CDS-S-firma_F_contig10815:2481..25741622815624.4619038-CDS-S-firma_F_contig10815:2481..2574Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 2482..2574 +
1696949461.7755427-CDS-S-firma_F_contig10815:2481..25741696949461.7755427-CDS-S-firma_F_contig10815:2481..2574Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 2482..2574 +
1622815624.4720566-CDS-S-firma_F_contig10815:2628..28501622815624.4720566-CDS-S-firma_F_contig10815:2628..2850Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 2629..2850 +
1696949461.7884185-CDS-S-firma_F_contig10815:2628..28501696949461.7884185-CDS-S-firma_F_contig10815:2628..2850Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 2629..2850 +
1622815624.4830685-CDS-S-firma_F_contig10815:2905..31441622815624.4830685-CDS-S-firma_F_contig10815:2905..3144Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 2906..3144 +
1696949461.7995286-CDS-S-firma_F_contig10815:2905..31441696949461.7995286-CDS-S-firma_F_contig10815:2905..3144Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 2906..3144 +
1622815624.4917336-CDS-S-firma_F_contig10815:3194..33571622815624.4917336-CDS-S-firma_F_contig10815:3194..3357Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 3195..3357 +
1696949461.8111134-CDS-S-firma_F_contig10815:3194..33571696949461.8111134-CDS-S-firma_F_contig10815:3194..3357Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 3195..3357 +
1622815624.503925-CDS-S-firma_F_contig10815:3420..34681622815624.503925-CDS-S-firma_F_contig10815:3420..3468Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 3421..3468 +
1696949461.8197105-CDS-S-firma_F_contig10815:3420..34681696949461.8197105-CDS-S-firma_F_contig10815:3420..3468Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10815 3421..3468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10815.1091.1

>prot_S-firma_F_contig10815.1091.1 ID=prot_S-firma_F_contig10815.1091.1|Name=mRNA_S-firma_F_contig10815.1091.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=255bp
TEWVKLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHH
DTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIA
PFYLELILGSLTSISTSSLRVVRLVRVFRMFKISRYMAWLKVFYGTIKVS
AAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSI
PASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITA
SFESE
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mRNA from alignment at S-firma_F_contig10815:2482..3468+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10815.1091.1 ID=mRNA_S-firma_F_contig10815.1091.1|Name=mRNA_S-firma_F_contig10815.1091.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=987bp|location=Sequence derived from alignment at S-firma_F_contig10815:2482..3468+ (Sphaerotrichia firma ET2_F female)
ACGGAGTGGGTCAAACTCAAGGCCAAGATTTGGGTGCTGATGGACGACCC CTCCAGCTCAGCGCTGGCCCGTGCGTTTTCCATCGTGGTTGTGGTGCGTG CCCAGTGTGCCGGGATGTGCTATGTTCTCCCCCTTGACCGCCTGCAGGCC ACAATTTTGATGTCGGTGACCGCCCTCGTCGTGGAGAGCTACCCGCAGCA CCACGACACGGACAGCTCCTTGTTCTTTGTGATTGAGCTCTTCTCCGTGA TTGTGTTCACTGTGGAGTACCTTTTGCGCTTCATTTCGTGCAGCTTTGGC CGCTGGGAGTTTGCAAGAGAACCCCTCAACGCTGTCGACGTAGTTGCCAT CGCACCGTTTTACCTGGAGGTGGGTGGCTTTTTCTGCACACTGTGTATGG TTTCCTTCACCCCCCCCCCCCCAGCTTATCCTGGGCTCCCTGACGTCCAT TTCAACGTCTTCCCTCCGTGTCGTCCGCCTCGTCCGCGTGTTCCGCATGT TCAAAATCTCACGGTACATGGCCTGGCTCAAGGTATTCTACGGGACCATC AAGGTGTCGGCGGCGCCCCTGGGCATGATCACCTTTGTGTTTGGCATCGT GGTGATTGTATTTTCCAGCCTGCTGTACTACGTGGAGCGCGGCACGTTTG ACGAGGAGCTGAGGTGGGTATTGATTGCTTGCGCCTTGGTCCTCAACTCA AACCCCGCCGCAGAATATACATAGACGACAGCGGCAACCCGTCACCATGG GATTCCATTCCGGCGTCCATGTGGTTCGTTGTGGTGACCATGACGACGAT TGGGTTTGGGGACATTGTGCCGATTTCTAGCTTTGGCAAGCTCATTGCCG GCATGGCGTCTGTCTCGGGGGTGTTGGTGCGTGCAGCGTGTTTGTGGAGG TCGCTGCGTGGCGTGTGGTCACCCTGCCCCCCCGGCCAGATGCTTGCCAT CCCAATTAGTGTCATCACGGCGTCCTTTGAGTCCGAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10815:2482..3468+

>mRNA_S-firma_F_contig10815.1091.1 ID=mRNA_S-firma_F_contig10815.1091.1|Name=mRNA_S-firma_F_contig10815.1091.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1530bp|location=Sequence derived from alignment at S-firma_F_contig10815:2482..3468+ (Sphaerotrichia firma ET2_F female)
ACGGAGTGGGTCAAACTCAAGGCCAAGATTTGGGTGCTGATGGACGACCC
CTCCAGCTCAGCGCTGGCCCGTGCGTTTTCCATCGTGGTTGTGACGGAGT
GGGTCAAACTCAAGGCCAAGATTTGGGTGCTGATGGACGACCCCTCCAGC
TCAGCGCTGGCCCGTGCGTTTTCCATCGTGGTTGTGGCCACAATTTTGAT
GTCGGTGACCGCCCTCGTCGTGGAGAGCTACCCGCAGCACCACGACACGG
ACAGCTCCTTGTTCTTTGTGATTGAGCTCTTCTCCGTGATTGTGTTCACT
GTGGAGTACCTTTTGCGCTTCATTTCGTGCAGCTTTGGCCGCTGGGAGTT
TGCAAGAGAACCCCTCAACGCTGTCGACGTAGTTGCCATCGCACCGTTTT
ACCTGGAGGCCACAATTTTGATGTCGGTGACCGCCCTCGTCGTGGAGAGC
TACCCGCAGCACCACGACACGGACAGCTCCTTGTTCTTTGTGATTGAGCT
CTTCTCCGTGATTGTGTTCACTGTGGAGTACCTTTTGCGCTTCATTTCGT
GCAGCTTTGGCCGCTGGGAGTTTGCAAGAGAACCCCTCAACGCTGTCGAC
GTAGTTGCCATCGCACCGTTTTACCTGGAGCTTATCCTGGGCTCCCTGAC
GTCCATTTCAACGTCTTCCCTCCGTGTCGTCCGCCTCGTCCGCGTGTTCC
GCATGTTCAAAATCTCACGGTACATGGCCTGGCTCAAGGTATTCTACGGG
ACCATCAAGGTGTCGGCGGCGCCCCTGGGCATGATCACCTTTGTGTTTGG
CATCGTGGTGATTGTATTTTCCAGCCTGCTGTACTACGTGGAGCGCGGCA
CGTTTGACGAGGAGCTGAGCTTATCCTGGGCTCCCTGACGTCCATTTCAA
CGTCTTCCCTCCGTGTCGTCCGCCTCGTCCGCGTGTTCCGCATGTTCAAA
ATCTCACGGTACATGGCCTGGCTCAAGGTATTCTACGGGACCATCAAGGT
GTCGGCGGCGCCCCTGGGCATGATCACCTTTGTGTTTGGCATCGTGGTGA
TTGTATTTTCCAGCCTGCTGTACTACGTGGAGCGCGGCACGTTTGACGAG
GAGCTGAGAATATACATAGACGACAGCGGCAACCCGTCACCATGGGATTC
CATTCCGGCGTCCATGTGGTTCGTTGTGGTGACCATGACGACGATTGGGT
TTGGGGACATTGTGCCGATTTCTAGCTTTGGCAAGCTCATTGCCGGCATG
GCGTCTGTCTCGGGGGTGTTGAATATACATAGACGACAGCGGCAACCCGT
CACCATGGGATTCCATTCCGGCGTCCATGTGGTTCGTTGTGGTGACCATG
ACGACGATTGGGTTTGGGGACATTGTGCCGATTTCTAGCTTTGGCAAGCT
CATTGCCGGCATGGCGTCTGTCTCGGGGGTGTTGATGCTTGCCATCCCAA
TTAGTGTCATCACGGCGTCCTTTGAGTCCGAGATGCTTGCCATCCCAATT
AGTGTCATCACGGCGTCCTTTGAGTCCGAG
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