mRNA_S-firma_F_contig10815.1091.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A0G4J8X2_PLABS (Ion_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8X2_PLABS) HSP 1 Score: 201 bits (511), Expect = 3.350e-58 Identity = 114/251 (45.42%), Postives = 180/251 (71.71%), Query Frame = 1
Query: 16 LKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISC-SFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
L+ +IW L+DDPSSS +A+A +I ++A I+++ A ++E+ P D +++ IE V+ FT+E +R +SC +G + REP+N VD++AIAP+Y+E + S + S+S RXXXXXXXXXXXX SRY+ W+ VF I+VSA PL M+ ++ + +++FS+ +YY ERGT + I+ G+PSP+ SIPA+ W+ ++T+TT+G+GD+VPI+ G+ IAG+A++ G+L+LAIPI++I+A+F SE
Sbjct: 59 LRQRIWALVDDPSSSTVAQALAISIMALIVLTGVAFILETVPGEASIDPNVWNTIETICVVCFTIELAVRLLSCPDYGAY--IREPMNWVDIIAIAPWYVETFVTSSGASSSSVFRXXXXXXXXXXXXXSRYITWISVFSNAIRVSAHPLAMLLYIMALALVLFSTAMYYAERGTLNAVTNIWERPDGSPSPYYSIPATFWWCIITITTVGYGDVVPITGTGRFIAGLAALCGILVLAIPITIISANFNSE 307
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S1C5H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5H7_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.630e-57 Identity = 119/256 (46.48%), Postives = 172/256 (67.19%), Query Frame = 1
Query: 4 EWVKLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSS--LRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
E + L+ +IW L+DDP SS A+ ++ V+A I +S T V+E+ PQ H S ++ IE F +I FT+EY+ R ++C + F + LN +D+VAIAP+Y+EL L S SS R XXXXXXXXXXISRY++W+K+F + SA PLGM+ F+ I IVFSS ++Y ERGT+ + +++ D G SP+ SIPAS W+ ++TMTT+G+GD P++ GKLIA + S+ G+L+LAIPI+VI+ +F E
Sbjct: 35 EELTLQQRIWALVDDPGSSQWAQIIAVWVMALIGLSCTTFVLETLPQFHRQQSGVWDAIETFCIINFTLEYVTRLVTCP-EKIPFLKGVLNIIDLVAIAPWYIELALSEPGDDSGSSAVFRVVXXXXXXXXXXISRYLSWVKIFASAMYQSAQPLGMLLFIMAIGTIVFSSAIFYAERGTWSDAEEVWLRDDGTASPYQSIPASFWWCIITMTTVGYGDDYPVTVTGKLIAAVTSLCGILVLAIPITVISTNFNEE 289
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S2S5R2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S5R2_9STRA) HSP 1 Score: 184 bits (466), Expect = 4.680e-52 Identity = 112/253 (44.27%), Postives = 170/253 (67.19%), Query Frame = 1
Query: 16 LKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHH---DTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
LK ++W +DDPSSS A+ FS+ ++ I SV +ES P + + D+S++ IE VI+FTVEY+LR ISC + +F + LN +D+ AI PFYLE +++++ R XXXXXXXXXX SRY++W+ +F + SA PL M+ FV I + FSS ++++E+G FDE +Y+ + G SP+ SIPA+ W+ +VTMTT+G+GD+ PI+ GKL+A +AS++G+L+LAIPI++I+ +F E
Sbjct: 74 LKQRMWAFLDDPSSSDGAQIFSLALMMVITFSVVVFCLESLPMFYLDAEDDNSIWAWIETICVIIFTVEYVLRLISCP-NKLKFLKSVLNTIDLAAIVPFYLEKYF----TVNSAVFRVVXXXXXXXXXXXSRYLSWISIFMEAMIQSAQPLTMLLFVMMIGCVFFSSAMFFIEKGEFDEVNEVYMRE-GKESPFQSIPATFWWCLVTMTTVGYGDVYPITPAGKLVASLASLTGILVLAIPITIISTNFSVE 320
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A0H5RRS8_9EUKA (Ion_trans domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RRS8_9EUKA) HSP 1 Score: 181 bits (460), Expect = 4.600e-51 Identity = 113/250 (45.20%), Postives = 165/250 (66.00%), Query Frame = 1
Query: 16 LKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
L+ +I+ L DDP SS A+ SI + I +S A V+E+ P+ D D ++ VIEL SV +F+ E+L+R SC F R+ LN +D ++IAP+YLE + + S++ R XXXXXXXXXXISRY+ W+KVF I+ SA L M+ +V + +IVFS+ ++Y ERG D ++Y D G SP+ SI AS W+ V+TMTT+G+GD VPI+ G+ IA + S+ G+L+LAIPI++I+A+F +E
Sbjct: 46 LRQRIFALFDDPGSSIWAQVVSIAMSICICISCAAFVLETVPELADVDEGIWNVIELASVAIFSGEFLIRIASCP-NLLAFVRDTLNFIDFISIAPYYLERLFLDASFSSSAVFRVVXXXXXXXXXXISRYVTWIKVFSDAIRSSAHALAMLLYVMAVALIVFSTAMFYAERGRVDPVTKMYFRDDGVRSPFYSIVASFWWCVITMTTVGYGDDVPITFTGRFIAVITSLCGILVLAIPITIISANFNAE 294
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S1CET9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CET9_9STRA) HSP 1 Score: 185 bits (470), Expect = 7.510e-51 Identity = 111/247 (44.94%), Postives = 167/247 (67.61%), Query Frame = 1
Query: 28 IWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVF-YGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
+W MDDPS S LAR S+ ++ I +S+ A +++S P+ +L IE F ++VFT+E+L+R ++ FAR LN +D+++I PFYLE +LG +S +TS LR XXXXXXX SRY++W+K+ Y IK S APLGM F+ I ++ S +YY+ERGT+D LR+YI D G + + SIP + W+ V+TMTT+G+GD++P++ GKL+A + S+SG+++LAIPISV +A+F +
Sbjct: 121 VWTTMDDPSFSPLARVISLFIMFLIFVSIVAYILDSMPELRSAAGTLDD-IETFCIVVFTIEFLVRLLATP-DLIAFARGVLNWIDLISILPFYLERVLGGNSS-ATSVLRIFRLVXXXXXXXXSRYISWIKLISYAVIK-SLAPLGMAIFITLIATVILGSAMYYIERGTWDPHLRVYITDGGVETDFVSIPEACWWCVITMTTVGYGDVLPVTPLGKLLACITSLSGIVLLAIPISVFSANFAKQ 363
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A5A8CUP7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUP7_CAFRO) HSP 1 Score: 174 bits (440), Expect = 4.730e-48 Identity = 115/260 (44.23%), Postives = 159/260 (61.15%), Query Frame = 1
Query: 4 EWV-----KLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSP-WDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
+WV +++A +W L+DDP+SS ++ S ++A I++SVT VVE+ P H LF IE +I F +E+ LR +SC +F + +N +D VAI PF+LEL + T T+ +R XXXXX +SRY+AWL+VF T+ S APLGMI FV G++VI+ SS Y+ ERG SP +DSIP SMW+ VVTMTTIGFG VP + GKL+ +A+ GV++LAIPISVI +F+ E
Sbjct: 166 QWVIAQVGRVRAAVWELLDDPASSWASQLISWWLMAAIIVSVTTFVVETVPGVHRQHDQLFSNIESVCMIHFVIEFALRLLSCP-NLVKFGTDVMNIIDFVAILPFFLELAMQGDTQ-GTAVIRAVRLVXXXXXVKVSRYLAWLRVFAATVHASVAPLGMILFVIGLLVILLSSAAYFAERGE---------------SPGFDSIPESMWWCVVTMTTIGFGRSVPRTLLGKLVGSIAATCGVVILAIPISVIATNFQLE 408
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A5A8CP70_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP70_CAFRO) HSP 1 Score: 174 bits (440), Expect = 4.100e-47 Identity = 115/260 (44.23%), Postives = 159/260 (61.15%), Query Frame = 1
Query: 4 EWV-----KLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSP-WDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
+WV +++A +W L+DDP+SS ++ S ++A I++SVT VVE+ P H LF IE +I F +E+ LR +SC +F + +N +D VAI PF+LEL + T T+ +R XXXXX +SRY+AWL+VF T+ S APLGMI FV G++VI+ SS Y+ ERG SP +DSIP SMW+ VVTMTTIGFG VP + GKL+ +A+ GV++LAIPISVI +F+ E
Sbjct: 166 QWVIAQVGRVRAAVWELLDDPASSWASQLISWWLMAAIIVSVTTFVVETVPGVHRQHDQLFSNIESVCMIHFVIEFALRLLSCP-NLVKFGTDVMNIIDFVAILPFFLELAMQGDTQ-GTAVIRAVRLVXXXXXVKVSRYLAWLRVFAATVHASVAPLGMILFVIGLLVILLSSAAYFAERGE---------------SPGFDSIPESMWWCVVTMTTIGFGRSVPRTLLGKLVGSIAATCGVVILAIPISVIATNFQLE 408
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A7S4BK27_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BK27_CHRCT) HSP 1 Score: 161 bits (407), Expect = 1.270e-43 Identity = 105/252 (41.67%), Postives = 162/252 (64.29%), Query Frame = 1
Query: 1 TEWVKLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASF 756
+ W KL+ ++++ +++PS S LA S +++ I +S A ++ SYP DS + V+E+ VI+FTVEY LRF R F + N +D++AIAPFY+E++LG ++ LR XXXXXXXXXXX SR M V G V L + FV G ++F+SLL+Y E+G +DE+ +I G+ SP+ IP ++W+ +VTMTT+G+GD+VP+ + G+++A A V+GVL+LA+P+SV+ A+F
Sbjct: 56 SRWGKLRHEVYLTLNEPSYSRLAMVVSNLIMVAIFISTVAFILGSYPDL--ADSHILKVLEVVVVILFTVEYGLRFAVYEGNRCNFVLDAFNLIDLMAIAPFYIEMVLGD--AVGGGVLRVXXXXXXXXXXXHSRDMQMFVVCMGN-SVQGLKLLFVLFVLG--ALIFASLLWYCEKGLYDEQAGAFIRSDGSESPFSDIPTTLWWAIVTMTTVGYGDMVPVETSGRVVATFAMVAGVLVLALPLSVVGANF 300
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A482RH94_9ARCH (Ion transporter (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RH94_9ARCH) HSP 1 Score: 157 bits (398), Expect = 1.740e-43 Identity = 97/243 (39.92%), Postives = 159/243 (65.43%), Query Frame = 1
Query: 37 LMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDTDSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSLRXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLMLAIPISVITASFESE 765
++D P+SS +A + +VA IL+SV + +SYP+ + + F IELF VIVFT+EY +R + C+ F N VD+++IAP+Y+EL+ G+ XXXXXXXXXXX I RY+ WL++F TI+ SA L M+ F+ G++++ +++L+Y+ ERG +D + ++ + G+P+ ++SIPA W ++V+M+ +GFGD+ ++ G+LI G A SG++MLA+P+ +IT +E
Sbjct: 3 IVDQPNSSYMATLVAYFLVAVILLSVGVFIADSYPEVAEANDRAFNAIELFCVIVFTIEYGVRCL-CAPEPRRFIFSFFNVVDLLSIAPYYIELMFGASGGSXXXXXXXXXXXXXXXXXKIGRYVTWLQIFGVTIQRSANALCMLFFIVGLLILFWATLVYFAERGAWDVDRGVWQREDGSPTSFESIPAVAWCIIVSMSVVGFGDMAATTAVGRLITGAAIFSGIVMLAVPVPIITGYLHTE 244
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Match: A0A2R5GM09_9STRA (Potassium voltage-gated channel protein Shaker n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM09_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.530e-43 Identity = 98/236 (41.53%), Postives = 154/236 (65.25%), Query Frame = 1
Query: 28 IWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHDT----DSSLFFVIELFSVIVFTVEYLLRFISCSFGRWEFAREPLNAVDVVAIAPFYLELILGSLTSISTSSL-RXXXXXXXXXXXXISRYMAWLKVFYGTIKVSAAPLGMITFVFGIVVIVFSSLLYYVERGTFDEELRIYIDDSGNPSPWDSIPASMWFVVVTMTTIGFGDIVPISSFGKLIAGMASVSGVLM 720
IW +DDPSSS A+ +S+ ++ I SV VES P+ ++ + +++ IE V++FT EY+LR +C + F R+ LN VD++AI PFYLE L +++ R XXXXXXXXXXISRY++W+++F ++ S PL M+ FV + + FSS ++++ERG FD + +Y+ G+ SP+ SIPA+ W+ +VTMTT+G+GD+ PI+ GKL+A + S++G+L+
Sbjct: 63 IWRFLDDPSSSKAAQCYSVALMGLITFSVVVFCVESLPRFYEESQGDEETIWDRIEFCCVVIFTSEYVLRLFTCP-SKSAFLRDFLNFVDLIAIVPFYLERAASYLLLPGDAAVFRVVXXXXXXXXXXISRYLSWIRIFVVAMQNSTQPLTMLLFVMMVGCVFFSSGMFFLERGDFDLDRGVYLRSDGSESPFQSIPATFWWCLVTMTTVGYGDVYPITPGGKLLATVTSLAGILV 297 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10815.1091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10815.1091.1 >prot_S-firma_F_contig10815.1091.1 ID=prot_S-firma_F_contig10815.1091.1|Name=mRNA_S-firma_F_contig10815.1091.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=255bp TEWVKLKAKIWVLMDDPSSSALARAFSIVVVATILMSVTALVVESYPQHHback to top mRNA from alignment at S-firma_F_contig10815:2482..3468+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10815.1091.1 ID=mRNA_S-firma_F_contig10815.1091.1|Name=mRNA_S-firma_F_contig10815.1091.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=987bp|location=Sequence derived from alignment at S-firma_F_contig10815:2482..3468+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10815:2482..3468+ >mRNA_S-firma_F_contig10815.1091.1 ID=mRNA_S-firma_F_contig10815.1091.1|Name=mRNA_S-firma_F_contig10815.1091.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1530bp|location=Sequence derived from alignment at S-firma_F_contig10815:2482..3468+ (Sphaerotrichia firma ET2_F female)back to top |