mRNA_S-firma_F_contig10773.1033.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI) HSP 1 Score: 567 bits (1461), Expect = 1.240e-195 Identity = 297/335 (88.66%), Postives = 307/335 (91.64%), Query Frame = 1
Query: 1 SAHLLLETLPMSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPAP--SKGSGQDARSGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 999
+AHLLLE LPMSF+SLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVP +KG+G+D RSGSASAA AP DPAEH+YKVPEL LGRVFRSA P+ELTESETEYVVRCVKHIMDGYVVLDF+ISNTIEEQ MLR V VEVE SDPDLYEV SV LPELKCGDTGHAYVVLKL EGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILK+ V+
Sbjct: 465 TAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPTGIVAKGAGKDGRSGSASAAEVAPDDPAEHVYKVPELERLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQ--------MLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHAYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKIAVR 791
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA) HSP 1 Score: 331 bits (848), Expect = 2.000e-102 Identity = 194/360 (53.89%), Postives = 236/360 (65.56%), Query Frame = 1
Query: 1 SAHLLLETLPMSFTSLEKAVKAYHQHMPA--TAGQPLVLSSLPVVEEVAVPAP-SKGS---------------GQDARSGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGT------GSVAAGKKEHALHLCGIFVGNVPVLVRAQLNV---DPQAGCILKVRVQ 999
+AHL+L+ LPMSF SLE+AV Y M + QPL+ S+LPVVEE VPAP +KG+ G D+R +A+A A DP +YK+PELA+LGRVFRS AP+ LTESETEYVVRCVKHI D +VVLDFS+ NTI +Q A S+P+LY VV S+PLP LK TGH YVVL A EP F+CEL F+ +D DP +G E DED EGF EEYPLE++ ++T+DFMAKV++GDFRR WEQMG E EVLEKFAL F+RL EAVA V DFLGMQ CDGT G+ A H LHL G+FVG+ PVLVRAQL + + GC+LK+ V+
Sbjct: 596 AAHLMLDGLPMSFASLERAVGLYALSMQSGTAQAQPLLFSTLPVVEEH-VPAPLTKGTSAASKPLAGAGGGFGGGDSRVAPTAASAPATADPTAELYKIPELAALGRVFRSTAPVPLTESETEYVVRCVKHIFDAHVVLDFSVHNTIADQMLTEAS-------------SEPELYSVVGSIPLPTLKYDQTGHCYVVLSRATEVAIEPVTFTCELHFKVVDCDPQSG--EADEDAEGFPEEYPLEEVELSTSDFMAKVNVGDFRRSWEQMGPEGEVLEKFALQFRRLDEAVAGVLDFLGMQPCDGTAAIKPTGTSAGLPPPHTLHLSGVFVGSKPVLVRAQLAITQSNDTIGCVLKIAVR 939
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S2G1B7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1B7_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.280e-91 Identity = 175/345 (50.72%), Postives = 223/345 (64.64%), Query Frame = 1
Query: 4 AHLLLETLPMSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPA---------PSKGSGQDARSGSASAAAEAPQ-DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALG-FKRLQEAVAAVEDFLGMQTCDGTGSVAAGKK--EHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 999
A +LLE LPMSF LEKAVK Y H GQPL + +LPVVEE P PS +G A + S +A+A D A +Y +PEL LGRVFRS AP+ELTESETEYVV+CVKHI+DG+VVL F ++NTI EQ L V ++VE S+P+LY+ + S+ +L G G +VVL A+F+CEL+F+ ++VDP TG +EGDED GFEE YP+E L++ TAD+MAKVSLGDFRR WE + +V EKFAL FK+L++AV V +FLGMQ CDG+ V KK H L+L G FVGNVPVLVRA L +D + IL++ V+
Sbjct: 28 AAMLLEPLPMSFAHLEKAVKLYAAHGGVEDGQPLSIDALPVVEEPVAPVAKGDALSSNPSVAAGGAATTSSGGLSADAEVVDAAAAVYAIPELGELGRVFRSCAPVELTESETEYVVKCVKHILDGHVVLQFDVTNTIAEQ--------QLVDVSMKVENSEPELYDEILSIKCDKLVYGVQGSCFVVLARNPEAPISHASFNCELEFRVVEVDPDTGDIEGDED--GFEENYPVETLDLNTADYMAKVSLGDFRRAWETTPNDCDVEEKFALQQFKKLEDAVENVIEFLGMQPCDGSDKVQHAKKGAPHPLYLSGKFVGNVPVLVRAMLQLD-SSQMILRICVR 361
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA) HSP 1 Score: 296 bits (759), Expect = 1.470e-89 Identity = 170/346 (49.13%), Postives = 218/346 (63.01%), Query Frame = 1
Query: 7 HLLLETLPMSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPAPS----KGSGQDARSGSASAAAEAP------QDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSV-----AAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 999
+LLLE LP+SF +LE++++AY H +AGQPL LS+LPVVEE A PAPS K + +A++ AP +DPA +Y++PELA LGRVFRS P+ LTESETEYVV+CVKH+ + VL+F ++NTI +Q L+ + V+VE + +LY V S+P YVVL F CEL F +++DP +G +EGD E YPLE L ++ AD MAKVSLGDFRR WE MG AEV+EKFAL FK+L+EAVA V DFLGMQ CDGT S+ A H LHL G+FVGN+PVLVR L +DP AGC+LK+ V+
Sbjct: 593 YLLLEPLPLSFPALERSLRAYQSHPGGSAGQPLQLSTLPVVEEPAAPAPSAQTHKLGAPAPTTATAASXXAAPGGAPGGEDPAAALYQIPELADLGRVFRSTQPVWLTESETEYVVQCVKHVFQNHTVLEFKVNNTIPDQK--------LQDIKVQVEAQE-ELYSVERSIPAEVALYSQPASCYVVLARQADQEFVGCTFGCELHFNVVEIDPNSGEVEGDPXXXXXE--YPLEALELSVADHMAKVSLGDFRRSWENMGNAAEVMEKFALQFKKLEEAVAGVIDFLGMQACDGTASIKPPAQGAPPTSHQLHLSGVFVGNIPVLVRCLLQMDPSAGCVLKIAVR 927
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S2S5Q9_9STRA (Coatomer subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5Q9_9STRA) HSP 1 Score: 290 bits (742), Expect = 3.870e-87 Identity = 176/348 (50.57%), Postives = 218/348 (62.64%), Query Frame = 1
Query: 4 AHLLLETLPMSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPA--PSKGSGQDARSGSASAAAEAPQ------------DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLY--EVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 999
A +L+E LPMSF++L++AVK Y QP+ L++LPVVE+ VPA SK Q + + A A DPA +Y VPELA LGRVFRS+AP+ELTESETEYVVRCVKHIMD YVVL F ++NTI EQ L +V V +E ++P+LY E SVP L G +V L PA FSCELKF+ ++VDP+TG +EGDE EGF E YPLE L I ADFMAKVSLGDFRR W+QMG E EV EKFAL K++++AVA D LGMQ C+ + VA+ K H L+L G FVGNVPVL R L +D + IL++ V+
Sbjct: 584 ASVLVEPLPMSFSALDRAVKLYASRGGTGDEQPMTLAALPVVEDTPVPAHASSKPGTQPGAVRTMATPASAASGGAXXXXXXXXXDPAAAVYAVPELAQLGRVFRSSAPVELTESETEYVVRCVKHIMDDYVVLQFDVTNTIAEQR--------LEEVTVGLEGNEPELYGDEEALSVPCATLVYSTPGSCFVALARNTEVPVVPAIFSCELKFRVVEVDPSTGEVEGDE--EGFAENYPLEDLEILPADFMAKVSLGDFRRAWDQMGDEGEVEEKFALAVKKVEDAVANTIDLLGMQPCERSEVVASKKGSHNLYLSGKFVGNVPVLARCMLQMDGSSQLILRINVR 921
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S2UA50_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA50_9STRA) HSP 1 Score: 275 bits (703), Expect = 5.160e-87 Identity = 164/345 (47.54%), Postives = 220/345 (63.77%), Query Frame = 1
Query: 1 SAHLLLETLPMSFTSLEKAVKAYHQHMPATAG-QPLVLSSLPVVEEVA--VPAPSKGSGQDARSGSASA-AAEAPQ-----DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSV---AAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 999
+A+++LETLPM+F LE++++AY + A +PL LS+LP+VE+ + A + G D + +A AP+ DPA IY++PELASLGRVFRS+AP+ LTE+ETEYVV+C+KHI +VVL F++ NTI++Q L V V V+ +D +L+EV + ++ G+T + + VL + P +F+CEL F + VDPATG EGD FEEEYPLE L IATADFM KV++GDFR+ WE MG EVLEKFAL FK L +AVAAV DFLGMQ CDGT SV K H LH+ G+FVG VL RAQ+ + +LK+ V+
Sbjct: 25 AAYVMLETLPMTFDKLERSIQAYMKAPYAMESPEPLTLSTLPIVEDTVEDLKAAASAVGDDMEEDTVAALTGAAPEVKPKADPAAVIYEIPELASLGRVFRSSAPVPLTENETEYVVQCIKHIFAEHVVLQFTVQNTIDDQR--------LENVTVAVDGNDSELFEVSGEIAAEKIPYGETVNCFTVLDRNAEASLGPNSFACELHFTVVQVDPATGEDEGD----SFEEEYPLEDLEIATADFMGKVAVGDFRKAWENMGNANEVLEKFALQFKSLNDAVAAVIDFLGMQPCDGTASVNPNVVDGKPHMLHMSGVFVGGCSVLARAQVALQ-SGSVVLKIAVR 356
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S1GPQ2_CYCTE (Coatomer subunit gamma n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPQ2_CYCTE) HSP 1 Score: 277 bits (709), Expect = 6.390e-84 Identity = 164/344 (47.67%), Postives = 221/344 (64.24%), Query Frame = 1
Query: 1 SAHLLLETLPMSFTSLEKAVKAYHQHMPAT--AGQPLVLSSLPVVEEVAVPAPSKGSGQDARS------GSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVA--AGKKEHALHLCGIFVGNVPVLVRAQLNVDPQ-AGCILKVRVQ 999
+A++LL+ LPMSF LE+++KAY P T + +P+ + SLPVVE+ A SG DA GS +AP D A +Y +PELASLGR FRS+ P++LTESETEYVV+CVKHI +VVL F + NTIEEQ L V V ++ S+ +++ V + + + G+T + + VL+ P+ F+CEL+F + VDPATG EGD FEEEYPLE L ++T+DFMAKVS+ DFR+ WE +G +EVLEKFAL FK++++AVAAV DFLGMQ CDGTG+V AG K H LHL G+FV VL RAQ+ + + G +LK+ V+
Sbjct: 385 AAYILLDALPMSFDKLERSLKAYVA-TPTTMSSSEPVTVDSLPVVEDTADEIARAMSGGDALELDTAPLGSVLEEKKAPVDAAAVVYDIPELASLGRAFRSSVPVQLTESETEYVVQCVKHIFANHVVLQFIVQNTIEEQR--------LDNVTVVIDDSESEVFNVSGEIAVDGITYGETKNCFTVLERNGEAPLSPSTFTCELRFLVVQVDPATGEEEGD----SFEEEYPLEDLEVSTSDFMAKVSVPDFRKSWETVGNSSEVLEKFALQFKKMEDAVAAVIDFLGMQPCDGTGAVKPNAGGKPHMLHLSGVFVTGQNVLARAQIAMQGENGGVVLKIAVR 715
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S3Y275_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y275_HETAK) HSP 1 Score: 257 bits (656), Expect = 3.730e-81 Identity = 139/266 (52.26%), Postives = 178/266 (66.92%), Query Frame = 1
Query: 214 QDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAE--AEVLEKFALG-FKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKE-HALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 999
+DPA +Y+ P LA+LGRVFRSA P ELTESETEYVVRCV+H+++ +VVL+F + NTI++Q +L++V V VEL D +LY VV VP P ++ G TG +V L+ E A CEL+F ++VDPATG +G D+EGF EEYPLE+L +A ++A+VSLGDFRR WEQMG AEV E FAL F L +AVA V + LG+Q DGTG VAA E H LHL G+F NVPVL R V PQ G +L++ V+
Sbjct: 7 EDPAARVYEQPALAALGRVFRSAPPTELTESETEYVVRCVRHVLEEHVVLEFRVQNTIDDQ--------LLKQVQVAVELEDEELYRVVAEVPCPRVRYGQTGSCFVALRRDPAREIELATLGCELRFNVVEVDPATGEPDGGPDDEGFPEEYPLEKLVLAARHYVARVSLGDFRRSWEQMGESGAAEVTENFALTKFATLGQAVAGVTEALGLQPADGTGRVAAADAEAHQLHLQGVFAPNVPVLARCLFKVHPQQGLLLQIAVR 264
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: B8CB37_THAPS (Coatomer subunit gamma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB37_THAPS) HSP 1 Score: 270 bits (691), Expect = 5.800e-80 Identity = 157/338 (46.45%), Postives = 213/338 (63.02%), Query Frame = 1
Query: 1 SAHLLLETLPMSFTSLEKAVKAYHQHMPAT-AGQPLVLSSLPVVEEVAVPAPSKGSGQDARSGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVA---AGKKEHALHLCGIFVGNVPVLVRAQLNVDPQA-GCILKVRVQ 999
+A +LL+ LPMSF L+++++AY + A + + L LS+LPVVEE A P PS D + + DPA +Y +PELASLGRVFRS+ P EL+E ETEYVVRC+KH+M +++L F I NT+E+Q R + V +E D + +EV + +K G+T +A+ V+ P F C L+F + VDP +G E D F+EEYPLE+L +AT+DFMAKVS+ DFR+GWE++G EVLEKFAL FK+ ++AVAAV DFLGMQ CDGTG + GKK H LHL G+FVG + VL RAQ+ A G +LK+ V+
Sbjct: 577 TAFVLLQGLPMSFDRLDRSIRAYIRAPAAMESAEQLTLSALPVVEESAEPEPSADEIDDEK--------KEVVDPAAAVYAIPELASLGRVFRSSNPTELSEEETEYVVRCIKHVMPEHIILQFLIQNTVEDQ------RLVNCSVTIE---GDSECFEVAGEIAAESIKYGETANAFTVINRNTEAPLAPCNFECVLRFGVIQVDPKSGEDESDP----FDEEYPLEELELATSDFMAKVSVPDFRKGWEEVGNANEVLEKFALQFKKQEDAVAAVIDFLGMQPCDGTGHIKPGEGGKKPHMLHLSGVFVGGMNVLARAQVAASGDAAGVLLKIAVR 893
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S1C1K4_9STRA (Coatomer subunit gamma n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1K4_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.730e-79 Identity = 160/341 (46.92%), Postives = 215/341 (63.05%), Query Frame = 1
Query: 1 SAHLLLETLPMSFTSLEKAVKAYHQHMPATAG-QPLVLSSLPVVEEVAVP---APSKGSGQDAR-SGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGK--KEHALHLCGIFVGNVPVLVRAQLNVDPQA-GCILKVRVQ 999
+++LLLE LPMSF L ++K+Y A + +P+ LS+LP+VE V P + + G+G A G + A P DPA +Y VP+L +LGRVFRS + LTESETEYVV CVKHI + Y+VL F + NTI++Q E CM E+ +PD++EV +P + G+T + +V+L+ A P F+CEL F VDPA+G EGD + EEY LE L I T+DFMAKV++G FR WE++G+ EVLEKFAL FK ++EA+ AV FLGMQ CDGTG+V A K H LHL G+FVGN+ V+VRAQ+ DP+ G LK+ V+
Sbjct: 596 ASYLLLEPLPMSFDQLSLSIKSYMAAPHALSSPEPMTLSALPIVETVQDPLVDSKTTGAGPSAPLDGENAKNAAEPADPAAAVYAVPDLNALGRVFRSTKTVALTESETEYVVSCVKHIYEEYIVLQFKVQNTIDDQRLENVTVCM--------EVDNPDVFEVTGEIPAESIGYGETKNCFVLLQRKPNAALCPLNFNCELHFTVQQVDPASGESEGDT----YPEEYVLECLEILTSDFMAKVNVGGFRGSWEKIGSGNEVLEKFALQFKSVEEALTAVISFLGMQPCDGTGTVKATNNGKPHMLHLSGVFVGNISVMVRAQVAEDPKGNGVTLKIAVR 924 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10773.1033.1 >prot_S-firma_F_contig10773.1033.1 ID=prot_S-firma_F_contig10773.1033.1|Name=mRNA_S-firma_F_contig10773.1033.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=324bp MSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPAPSKGSGQDARback to top mRNA from alignment at S-firma_F_contig10773:123..4155+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10773.1033.1 ID=mRNA_S-firma_F_contig10773.1033.1|Name=mRNA_S-firma_F_contig10773.1033.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4033bp|location=Sequence derived from alignment at S-firma_F_contig10773:123..4155+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10773:123..4155+ >mRNA_S-firma_F_contig10773.1033.1 ID=mRNA_S-firma_F_contig10773.1033.1|Name=mRNA_S-firma_F_contig10773.1033.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1944bp|location=Sequence derived from alignment at S-firma_F_contig10773:123..4155+ (Sphaerotrichia firma ET2_F female)back to top |