prot_S-firma_F_contig10773.1033.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10773.1033.1
Unique Nameprot_S-firma_F_contig10773.1033.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length324
Homology
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 9.200e-190
Identity = 289/325 (88.92%), Postives = 298/325 (91.69%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPAP--SKGSGQDARSGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            MSF+SLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVP    +KG+G+D RSGSASAA  AP DPAEH+YKVPEL  LGRVFRSA P+ELTESETEYVVRCVKHIMDGYVVLDF+ISNTIEEQ        MLR V VEVE SDPDLYEV  SV LPELKCGDTGHAYVVLKL EGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILK+ V+
Sbjct:  475 MSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPTGIVAKGAGKDGRSGSASAAEVAPDDPAEHVYKVPELERLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQ--------MLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHAYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKIAVR 791          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA)

HSP 1 Score: 318 bits (815), Expect = 9.160e-98
Identity = 188/350 (53.71%), Postives = 227/350 (64.86%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPA--TAGQPLVLSSLPVVEEVAVPAP-SKGS---------------GQDARSGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGT------GSVAAGKKEHALHLCGIFVGNVPVLVRAQLNV---DPQAGCILKVRVQ 323
            MSF SLE+AV  Y   M +     QPL+ S+LPVVEE  VPAP +KG+               G D+R    +A+A A  DP   +YK+PELA+LGRVFRS AP+ LTESETEYVVRCVKHI D +VVLDFS+ NTI +Q    A              S+P+LY VV S+PLP LK   TGH YVVL      A EP  F+CEL F+ +D DP +G  E DED EGF EEYPLE++ ++T+DFMAKV++GDFRR WEQMG E EVLEKFAL F+RL EAVA V DFLGMQ CDGT      G+ A     H LHL G+FVG+ PVLVRAQL +   +   GC+LK+ V+
Sbjct:  606 MSFASLERAVGLYALSMQSGTAQAQPLLFSTLPVVEEH-VPAPLTKGTSAASKPLAGAGGGFGGGDSRVAPTAASAPATADPTAELYKIPELAALGRVFRSTAPVPLTESETEYVVRCVKHIFDAHVVLDFSVHNTIADQMLTEAS-------------SEPELYSVVGSIPLPTLKYDQTGHCYVVLSRATEVAIEPVTFTCELHFKVVDCDPQSG--EADEDAEGFPEEYPLEEVELSTSDFMAKVNVGDFRRSWEQMGPEGEVLEKFALQFRRLDEAVAGVLDFLGMQPCDGTAAIKPTGTSAGLPPPHTLHLSGVFVGSKPVLVRAQLAITQSNDTIGCVLKIAVR 939          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S2G1B7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1B7_9STRA)

HSP 1 Score: 277 bits (708), Expect = 7.490e-88
Identity = 169/336 (50.30%), Postives = 216/336 (64.29%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPA---------PSKGSGQDARSGSASAAAEAPQ-DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALG-FKRLQEAVAAVEDFLGMQTCDGTGSVAAGKK--EHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            MSF  LEKAVK Y  H     GQPL + +LPVVEE   P          PS  +G  A + S   +A+A   D A  +Y +PEL  LGRVFRS AP+ELTESETEYVV+CVKHI+DG+VVL F ++NTI EQ         L  V ++VE S+P+LY+ + S+   +L  G  G  +VVL          A+F+CEL+F+ ++VDP TG +EGDED  GFEE YP+E L++ TAD+MAKVSLGDFRR WE    + +V EKFAL  FK+L++AV  V +FLGMQ CDG+  V   KK   H L+L G FVGNVPVLVRA L +D  +  IL++ V+
Sbjct:   37 MSFAHLEKAVKLYAAHGGVEDGQPLSIDALPVVEEPVAPVAKGDALSSNPSVAAGGAATTSSGGLSADAEVVDAAAAVYAIPELGELGRVFRSCAPVELTESETEYVVKCVKHILDGHVVLQFDVTNTIAEQ--------QLVDVSMKVENSEPELYDEILSIKCDKLVYGVQGSCFVVLARNPEAPISHASFNCELEFRVVEVDPDTGDIEGDED--GFEENYPVETLDLNTADYMAKVSLGDFRRAWETTPNDCDVEEKFALQQFKKLEDAVENVIEFLGMQPCDGSDKVQHAKKGAPHPLYLSGKFVGNVPVLVRAMLQLD-SSQMILRICVR 361          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.160e-85
Identity = 164/338 (48.52%), Postives = 211/338 (62.43%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPAPS----KGSGQDARSGSASAAAEAP------QDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSV-----AAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            +SF +LE++++AY  H   +AGQPL LS+LPVVEE A PAPS    K       + +A++   AP      +DPA  +Y++PELA LGRVFRS  P+ LTESETEYVV+CVKH+   + VL+F ++NTI +Q         L+ + V+VE  + +LY V  S+P            YVVL            F CEL F  +++DP +G +EGD      E  YPLE L ++ AD MAKVSLGDFRR WE MG  AEV+EKFAL FK+L+EAVA V DFLGMQ CDGT S+      A    H LHL G+FVGN+PVLVR  L +DP AGC+LK+ V+
Sbjct:  601 LSFPALERSLRAYQSHPGGSAGQPLQLSTLPVVEEPAAPAPSAQTHKLGAPAPTTATAASXXAAPGGAPGGEDPAAALYQIPELADLGRVFRSTQPVWLTESETEYVVQCVKHVFQNHTVLEFKVNNTIPDQK--------LQDIKVQVEAQE-ELYSVERSIPAEVALYSQPASCYVVLARQADQEFVGCTFGCELHFNVVEIDPNSGEVEGDPXXXXXE--YPLEALELSVADHMAKVSLGDFRRSWENMGNAAEVMEKFALQFKKLEEAVAGVIDFLGMQACDGTASIKPPAQGAPPTSHQLHLSGVFVGNIPVLVRCLLQMDPSAGCVLKIAVR 927          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S2S5Q9_9STRA (Coatomer subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5Q9_9STRA)

HSP 1 Score: 281 bits (719), Expect = 5.690e-84
Identity = 171/339 (50.44%), Postives = 211/339 (62.24%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPA--PSKGSGQDARSGSASAAAEAPQ------------DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLY--EVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            MSF++L++AVK Y         QP+ L++LPVVE+  VPA   SK   Q     + +  A A              DPA  +Y VPELA LGRVFRS+AP+ELTESETEYVVRCVKHIMD YVVL F ++NTI EQ         L +V V +E ++P+LY  E   SVP   L     G  +V L         PA FSCELKF+ ++VDP+TG +EGDE  EGF E YPLE L I  ADFMAKVSLGDFRR W+QMG E EV EKFAL  K++++AVA   D LGMQ C+ +  VA+ K  H L+L G FVGNVPVL R  L +D  +  IL++ V+
Sbjct:  593 MSFSALDRAVKLYASRGGTGDEQPMTLAALPVVEDTPVPAHASSKPGTQPGAVRTMATPASAASGGAXXXXXXXXXDPAAAVYAVPELAQLGRVFRSSAPVELTESETEYVVRCVKHIMDDYVVLQFDVTNTIAEQR--------LEEVTVGLEGNEPELYGDEEALSVPCATLVYSTPGSCFVALARNTEVPVVPAIFSCELKFRVVEVDPSTGEVEGDE--EGFAENYPLEDLEILPADFMAKVSLGDFRRAWDQMGDEGEVEEKFALAVKKVEDAVANTIDLLGMQPCERSEVVASKKGSHNLYLSGKFVGNVPVLARCMLQMDGSSQLILRINVR 921          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S2UA50_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA50_9STRA)

HSP 1 Score: 262 bits (669), Expect = 4.810e-82
Identity = 158/335 (47.16%), Postives = 210/335 (62.69%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPATAG-QPLVLSSLPVVEEVA--VPAPSKGSGQDARSGSASA-AAEAPQ-----DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSV---AAGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            M+F  LE++++AY +   A    +PL LS+LP+VE+    + A +   G D    + +A    AP+     DPA  IY++PELASLGRVFRS+AP+ LTE+ETEYVV+C+KHI   +VVL F++ NTI++Q         L  V V V+ +D +L+EV   +   ++  G+T + + VL      +  P +F+CEL F  + VDPATG  EGD     FEEEYPLE L IATADFM KV++GDFR+ WE MG   EVLEKFAL FK L +AVAAV DFLGMQ CDGT SV       K H LH+ G+FVG   VL RAQ+ +      +LK+ V+
Sbjct:   35 MTFDKLERSIQAYMKAPYAMESPEPLTLSTLPIVEDTVEDLKAAASAVGDDMEEDTVAALTGAAPEVKPKADPAAVIYEIPELASLGRVFRSSAPVPLTENETEYVVQCIKHIFAEHVVLQFTVQNTIDDQR--------LENVTVAVDGNDSELFEVSGEIAAEKIPYGETVNCFTVLDRNAEASLGPNSFACELHFTVVQVDPATGEDEGD----SFEEEYPLEDLEIATADFMGKVAVGDFRKAWENMGNANEVLEKFALQFKSLNDAVAAVIDFLGMQPCDGTASVNPNVVDGKPHMLHMSGVFVGGCSVLARAQVALQ-SGSVVLKIAVR 356          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S3Y275_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y275_HETAK)

HSP 1 Score: 257 bits (656), Expect = 2.660e-81
Identity = 139/266 (52.26%), Postives = 178/266 (66.92%), Query Frame = 0
Query:   62 QDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAE--AEVLEKFALG-FKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKE-HALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            +DPA  +Y+ P LA+LGRVFRSA P ELTESETEYVVRCV+H+++ +VVL+F + NTI++Q        +L++V V VEL D +LY VV  VP P ++ G TG  +V L+       E A   CEL+F  ++VDPATG  +G  D+EGF EEYPLE+L +A   ++A+VSLGDFRR WEQMG    AEV E FAL  F  L +AVA V + LG+Q  DGTG VAA   E H LHL G+F  NVPVL R    V PQ G +L++ V+
Sbjct:    7 EDPAARVYEQPALAALGRVFRSAPPTELTESETEYVVRCVRHVLEEHVVLEFRVQNTIDDQ--------LLKQVQVAVELEDEELYRVVAEVPCPRVRYGQTGSCFVALRRDPAREIELATLGCELRFNVVEVDPATGEPDGGPDDEGFPEEYPLEKLVLAARHYVARVSLGDFRRSWEQMGESGAAEVTENFALTKFATLGQAVAGVTEALGLQPADGTGRVAAADAEAHQLHLQGVFAPNVPVLARCLFKVHPQQGLLLQIAVR 264          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S1GPQ2_CYCTE (Coatomer subunit gamma n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPQ2_CYCTE)

HSP 1 Score: 266 bits (680), Expect = 8.160e-80
Identity = 159/334 (47.60%), Postives = 212/334 (63.47%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPAT--AGQPLVLSSLPVVEEVAVPAPSKGSGQDARS------GSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVA--AGKKEHALHLCGIFVGNVPVLVRAQLNVDPQ-AGCILKVRVQ 323
            MSF  LE+++KAY    P T  + +P+ + SLPVVE+ A       SG DA        GS     +AP D A  +Y +PELASLGR FRS+ P++LTESETEYVV+CVKHI   +VVL F + NTIEEQ         L  V V ++ S+ +++ V   + +  +  G+T + + VL+        P+ F+CEL+F  + VDPATG  EGD     FEEEYPLE L ++T+DFMAKVS+ DFR+ WE +G  +EVLEKFAL FK++++AVAAV DFLGMQ CDGTG+V   AG K H LHL G+FV    VL RAQ+ +  +  G +LK+ V+
Sbjct:  395 MSFDKLERSLKAYVA-TPTTMSSSEPVTVDSLPVVEDTADEIARAMSGGDALELDTAPLGSVLEEKKAPVDAAAVVYDIPELASLGRAFRSSVPVQLTESETEYVVQCVKHIFANHVVLQFIVQNTIEEQR--------LDNVTVVIDDSESEVFNVSGEIAVDGITYGETKNCFTVLERNGEAPLSPSTFTCELRFLVVQVDPATGEEEGD----SFEEEYPLEDLEVSTSDFMAKVSVPDFRKSWETVGNSSEVLEKFALQFKKMEDAVAAVIDFLGMQPCDGTGAVKPNAGGKPHMLHLSGVFVTGQNVLARAQIAMQGENGGVVLKIAVR 715          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: A0A7S1E5C3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5C3_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.620e-77
Identity = 130/263 (49.43%), Postives = 175/263 (66.54%), Query Frame = 0
Query:   63 DPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVA--AGKKEHALHLCGIFVGNVPVLVRAQLNVDPQAGCILKVRVQ 323
            DPA  +Y++PELA+LGR FRS+ P+ LTE+ETEYVV+CVKHI   +VVL F + NTIEEQ         L  V V  + +D + +++   +P+  +  GDT + + VL+        P+  SCEL+F  + VDPATG  EGD     FEEEYPLE L ++TADFMAKVS+ DFR+ WE +G + EVLEKFAL F+RL++AV AV DFLGMQ CDGT ++    G+K H LHL G+FV    V+ RAQ+ +  + G +LK+ V+
Sbjct:    6 DPAAVVYEIPELAALGRAFRSSKPVMLTENETEYVVQCVKHIFPNHVVLQFIVQNTIEEQR--------LDNVTVVFDDADTESFKISGEIPVDGIAYGDTKNCFTVLERDADAPLTPSTMSCELRFTVVQVDPATGEEEGDT----FEEEYPLEDLELSTADFMAKVSVPDFRKSWETVGNDNEVLEKFALQFRRLEDAVTAVIDFLGMQACDGTAALKPNTGEKPHMLHLSGVFVSGEKVMARAQIAMQGETGVVLKIAVR 256          
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Match: B8CB37_THAPS (Coatomer subunit gamma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB37_THAPS)

HSP 1 Score: 261 bits (668), Expect = 8.290e-77
Identity = 152/328 (46.34%), Postives = 205/328 (62.50%), Query Frame = 0
Query:    1 MSFTSLEKAVKAYHQHMPAT-AGQPLVLSSLPVVEEVAVPAPSKGSGQDARSGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRCVKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVVDSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLEKFALGFKRLQEAVAAVEDFLGMQTCDGTGSVA---AGKKEHALHLCGIFVGNVPVLVRAQLNVDPQA-GCILKVRVQ 323
            MSF  L+++++AY +   A  + + L LS+LPVVEE A P PS     D +        +   DPA  +Y +PELASLGRVFRS+ P EL+E ETEYVVRC+KH+M  +++L F I NT+E+Q      R +   V +E    D + +EV   +    +K G+T +A+ V+         P  F C L+F  + VDP +G  E D     F+EEYPLE+L +AT+DFMAKVS+ DFR+GWE++G   EVLEKFAL FK+ ++AVAAV DFLGMQ CDGTG +     GKK H LHL G+FVG + VL RAQ+     A G +LK+ V+
Sbjct:  587 MSFDRLDRSIRAYIRAPAAMESAEQLTLSALPVVEESAEPEPSADEIDDEK--------KEVVDPAAAVYAIPELASLGRVFRSSNPTELSEEETEYVVRCIKHVMPEHIILQFLIQNTVEDQ------RLVNCSVTIE---GDSECFEVAGEIAAESIKYGETANAFTVINRNTEAPLAPCNFECVLRFGVIQVDPKSGEDESDP----FDEEYPLEELELATSDFMAKVSVPDFRKGWEEVGNANEVLEKFALQFKKQEDAVAAVIDFLGMQPCDGTGHIKPGEGGKKPHMLHLSGVFVGGMNVLARAQVAASGDAAGVLLKIAVR 893          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10773.1033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHC8_ECTSI9.200e-19088.92Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CC02_9STRA9.160e-9853.71Coatomer subunit gamma n=1 Tax=Tribonema minus Tax... [more]
A0A7S2G1B7_9STRA7.490e-8850.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6U1MSQ3_9STRA1.160e-8548.52Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica... [more]
A0A7S2S5Q9_9STRA5.690e-8450.44Coatomer subunit gamma n=1 Tax=Rhizochromulina mar... [more]
A0A7S2UA50_9STRA4.810e-8247.16Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3Y275_HETAK2.660e-8152.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1GPQ2_CYCTE8.160e-8047.60Coatomer subunit gamma n=1 Tax=Cyclophora tenuis T... [more]
A0A7S1E5C3_9STRA1.620e-7749.43Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
B8CB37_THAPS8.290e-7746.34Coatomer subunit gamma n=1 Tax=Thalassiosira pseud... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013040Coatomer, gamma subunit, appendage, Ig-like subdomainPFAMPF08752COP-gamma_platfcoord: 65..221
e-value: 4.2E-41
score: 140.6
IPR032154Coatomer subunit gamma, C-terminalPFAMPF16381Coatomer_g_Cplacoord: 224..322
e-value: 9.4E-27
score: 93.4
IPR037067Coatomer, gamma subunit, appendage domain superfamilyGENE3D2.60.40.1480coord: 56..222
e-value: 3.8E-40
score: 139.5
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 223..323
e-value: 6.1E-27
score: 95.8
IPR017106Coatomer gamma subunitPANTHERPTHR10261COATOMER SUBUNIT GAMMAcoord: 2..322
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilySUPERFAMILY49348Clathrin adaptor appendage domaincoord: 60..225
IPR009028Coatomer/calthrin adaptor appendage, C-terminal subdomainSUPERFAMILY55711Subdomain of clathrin and coatomer appendage domaincoord: 226..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10773contigS-firma_F_contig10773:153..4155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10773.1033.1mRNA_S-firma_F_contig10773.1033.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10773 123..4155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10773.1033.1 ID=prot_S-firma_F_contig10773.1033.1|Name=mRNA_S-firma_F_contig10773.1033.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=324bp
MSFTSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPAPSKGSGQDAR
SGSASAAAEAPQDPAEHIYKVPELASLGRVFRSAAPLELTESETEYVVRC
VKHIMDGYVVLDFSISNTIEEQASEAALRCMLRKVVVEVELSDPDLYEVV
DSVPLPELKCGDTGHAYVVLKLLEGNAAEPAAFSCELKFQALDVDPATGL
LEGDEDEEGFEEEYPLEQLNIATADFMAKVSLGDFRRGWEQMGAEAEVLE
KFALGFKRLQEAVAAVEDFLGMQTCDGTGSVAAGKKEHALHLCGIFVGNV
PVLVRAQLNVDPQAGCILKVRVQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009028Coatomer/calthrin_app_sub_C
IPR013041Clathrin_app_Ig-like_sf
IPR017106Coatomer_gsu
IPR012295TBP_dom_sf
IPR037067Coatomer_gsu_app_sf
IPR032154Coatomer_g_Cpla
IPR013040Coatomer_gsu_app_Ig-like_dom