mRNA_S-firma_F_contig10686.926.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: D8LHJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHJ5_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 3.340e-130 Identity = 238/379 (62.80%), Postives = 270/379 (71.24%), Query Frame = 1
Query: 1 LYLTHWTFALQTVYFFLALGSAAHLWSNSGRKRRGG-LWSSREIAGGGRELGSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGAGRFSPVS---GVGGLETGKGXXXXXXXXXXXXXXXXXXXXX-------VTLERWRKLQWGLLIVCADSSIIVSGVYWTFLYNGWTDQLNLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRY-DSKVIYFFLDWGGTPGRAVTITLFLLLVGLPLSHGVHVLMAAGRDRLRRMRPDWGWQGTDEEELERAMEVSGLRDAEVWAPLTGEGFDSEEEEMGGSSVLRDHGYVGGSRSVSANGATKTGVSAAAV 1101
LYLTHWTFALQT+Y+FLALGSA HLW NSGRKRR G LWSSREI GGGREL +G G GR + + G GL K XXXX XXXXXXXXXXXXXX + LERWRKLQWGLLIVCADS+IIV+GVYWTFLYNGWTDQLNLQIHLFNA+FMAANVF+GG+PF+WEH+GIAYIYGFLYL FDI+YY+FGS+F Y DS+VIYFFLDWGG PGR+VT++LFLL VGLPLSHG+HV +A GRD +RRMRP WGWQGTDEE+ ER ME+SGLRD +VWAPLTGEGFDSEEEEMGG+SV D+ + +R S NG K G ++ AV
Sbjct: 11 LYLTHWTFALQTLYYFLALGSAIHLWLNSGRKRRAGWLWSSREIGGGGRELEGVGGGPAIKGRGVGRAGNDSARDRSKEKRE-------------------------GLGRSAAAAVDAGKEGLPLPKPAGXXXXVXXXXXXXXXXXXXXXXXNGEHIALERWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVIYFFLDWGGAPGRSVTVSLFLLSVGLPLSHGLHVAVAWGRDWVRRMRPGWGWQGTDEEDFERVMEMSGLRDTDVWAPLTGEGFDSEEEEMGGASVFHDYHHAA-ARVPSGNG--KRGGASRAV 361
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: UPI001458C99F (protein rolling stone-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458C99F) HSP 1 Score: 72.8 bits (177), Expect = 2.790e-10 Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 460 KLQWGLLIVCADSSIIVSGVYWTFLYNGWT--DQLNLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTITLFLLLVGLPLSHGVHVLMAAGRDRLRRM 870
K W + V SI VS +YW LY+ +N++ H NAV++ N+F+ G P + H+ + +Y +Y+ F + Y + G D +Y LDW G+ G + I++ + V +PL H + G RLRR+
Sbjct: 127 KFNWVVFNVANTCSITVSILYWGLLYSSSEVMTAVNIETHALNAVYVIMNLFVTGMPVRILHLWHSMVYALVYVLFSLFYTLGGGTNHVDKNYVYSVLDWKGSTGFTLGISIAVTFVAMPLVH----CLCYGMYRLRRV 261
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: UPI0009E39AD2 (protein rolling stone-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E39AD2) HSP 1 Score: 72.4 bits (176), Expect = 3.010e-10 Identity = 39/130 (30.00%), Postives = 68/130 (52.31%), Query Frame = 1
Query: 439 VTLERWRKLQWGLLIVCADSSIIVSGVYWTFLYNGWTDQLNLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTITLFLLLVGLPLSHGV 828
V++ + K W + + A+SSI+++ +YWT ++ G T L++ HL N VFM ++ L P + HV A I G Y+ ++++ IY ++D+ TPG + + + + VG PLS V
Sbjct: 126 VSMSWYHKGLWVIFNMAANSSILITLLYWTLIFGGKTSGLDVTTHLLNCVFMIGDLMLSTTPVRILHVLYALILGVCYILLTVIFWAADGTNARGEPYIYSYVDYNETPGFSSGLIIGFVFVGQPLSQAV 255
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: A0A7S2Y4E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4E7_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.100e-7 Identity = 35/120 (29.17%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 463 LQWGLLIVCADSSIIVSGVYWTFLYNGWTDQLNLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTITLFLLLVGLPLSH 822
+QW + D +IV+ VYW F+Y G +H N++ M + + P H +A +YG +YL ++Y+ S IY +DW +PG A + L+ +G+PL H
Sbjct: 135 VQWIAYYITLDCCVIVTIVYWLFVYEGKFGANTFVLHTINSLVMVFDQLIVAMPCGKMHFWVAQVYGVIYLVQTLIYWGADK----TSFPIYDIIDWSNSPGGAALWAIILICIGIPLMH 250
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: A0A210QNM9_MIZYE (Protein rolling stone n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QNM9_MIZYE) HSP 1 Score: 60.8 bits (146), Expect = 2.150e-7 Identity = 34/104 (32.69%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 556 LNLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTITLFLLLVGLPLSHGVHVLMAAGRDRLRR 867
+N++ H NAV++ N+F+ G P + H + +Y F+Y+ F + Y + G + +Y LDW G+ G V I++ ++ V +PL H V G RLRR
Sbjct: 4 VNIETHALNAVYVILNLFVTGLPVRILHFWHSMVYAFVYVLFSLFYTLGGGTNEANKNYVYSVLDWKGSTGFTVGISIAVIFVAMPLVHCV----CYGIYRLRR 103
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: A0A835Z121_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z121_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.950e-7 Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = 1
Query: 469 WGLLIVCADSSIIVSGVYWTFLYNGWTDQLNLQIHLFNAVFMAANVFLGGAP-FQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTITLFLLLVGLPLSHGVHVLM 840
W L + + IVS VYW+ ++ TD ++ Q H N V + L +P + H + ++YG +Y+A+D+++Y + IY LDW P RA TL +L V +PL+H + L+
Sbjct: 595 WVLQDLTYAGTFIVSLVYWSVIFRLSTDAISAQSHAANFVIALLDCLLAASPPVRILHAWVPFVYGTVYIAWDLIHYYTNIRNGEGDRYIYTILDWSD-PARAAAATLIMLFVVVPLTHTIMSLV 718
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: T1IT61_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IT61_STRMM) HSP 1 Score: 60.1 bits (144), Expect = 2.190e-6 Identity = 33/115 (28.70%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 460 KLQWGLLIVCADSSIIVSGVYWTFLYNGWTDQL---NLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTITLFL 795
K+ W + +SI+++ VYW FLY T L N+QIH N+V + ++ + PF+ H ++G YL F+++Y++ ++VIY LDW ++ + + L
Sbjct: 62 KISWVFTNLSTSTSILITAVYWIFLYPDGTSTLDYGNIQIHAINSVVIVLDLIIISIPFRLFHFYQPLLFGLSYLIFNLIYWII------TNEVIYSILDWQKVTKSSIFVIVML 170
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: A0A1J1HKH2_9DIPT (CLUMA_CG001695, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1HKH2_9DIPT) HSP 1 Score: 59.7 bits (143), Expect = 8.130e-6 Identity = 34/108 (31.48%), Postives = 53/108 (49.07%), Query Frame = 1
Query: 460 KLQWGLLIVCADSSIIVSGVYWTFLYNGWTDQLNLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDWGGTPGRAVTI 783
K W V S+++++ VYWT L++G TD L++ IH N+ M ++ + P H G LYL F ++YY G + ++ IY LDW T + I
Sbjct: 108 KFLWFWSNVAVTSALVITIVYWTLLFDGRTDALDILIHGGNSAAMIIDLLIACHPMYIIHFIWPVGLGILYLIFTVIYYFAGGVDAQGNRYIYDVLDWSRTDALDILI 215
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: UPI0014254F38 (protein rolling stone-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014254F38) HSP 1 Score: 58.9 bits (141), Expect = 9.440e-6 Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 460 KLQWGLLIVCADSSIIVSGVYWTFLYNGWTDQLN-------LQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFFLDW 753
KLQW L + A++SI+V+ VYWT LY+ T LN L +H + L PF++ HV YG +YL F I+Y+V G Y IY +D+
Sbjct: 120 KLQWFLYYLSANTSIMVTVVYWTALYS--TGNLNFVDLFIDLNVHTLTSFVGIIETMLSATPFRFIHVVYPLWYGAVYLFFTIIYWVAGGTDPYGHSYIYPIIDY 222
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Match: A0A1B0FKF6_GLOMM (Uncharacterized protein n=1 Tax=Glossina morsitans morsitans TaxID=37546 RepID=A0A1B0FKF6_GLOMM) HSP 1 Score: 55.5 bits (132), Expect = 7.080e-5 Identity = 29/91 (31.87%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 463 LQWGLLIVCADSSIIVSGVYWTFLYNGWTDQL---NLQIHLFNAVFMAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDS 726
+ W + ++ SSI+V+ +YW FLY D L N+ H+ N V M +++ + P + H+ + YG +Y F I+Y G RY+S
Sbjct: 124 IYWAMHVLSLVSSILVTVIYWCFLYEANEDSLSAANILTHILNCVSMLSDLLIVAHPLRLLHIFLPIAYGLIYAFFSIIYQFSGGHNRYNS 214 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10686.926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10686.926.1 >prot_S-firma_F_contig10686.926.1 ID=prot_S-firma_F_contig10686.926.1|Name=mRNA_S-firma_F_contig10686.926.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=172bp MAANVFLGGAPFQWEHVGIAYIYGFLYLAFDIVYYVFGSIFRYDSKVIYFback to top mRNA from alignment at S-firma_F_contig10686:121..4708- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10686.926.1 ID=mRNA_S-firma_F_contig10686.926.1|Name=mRNA_S-firma_F_contig10686.926.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4588bp|location=Sequence derived from alignment at S-firma_F_contig10686:121..4708- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10686:121..4708- >mRNA_S-firma_F_contig10686.926.1 ID=mRNA_S-firma_F_contig10686.926.1|Name=mRNA_S-firma_F_contig10686.926.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1032bp|location=Sequence derived from alignment at S-firma_F_contig10686:121..4708- (Sphaerotrichia firma ET2_F female)back to top |