mRNA_S-firma_F_contig1068.917.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A3L7VMA8_9BACT (M48 family peptidase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7VMA8_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 1.900e-20 Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 1
Query: 1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLS--TSPPPSLQSLVYMLRSSSPLLSSLV--------DFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV---MGSLPTSA--VEWTSTHPTSPKRARRLQEII 636
++ S Q E MG ++ + + ++ ++ ++G+++ AA P E EF V++ E NA+C P GK+A YTG+ E EAGL VM+HE HAIARH E+++ T+ +L Y ++ +V + V LPFSR E+EAD++G++LM G DP A GS T +EW STHP+ R+ L+E++
Sbjct: 28 LITSEQSENAMGLTAYQEVLKSEPLTKNEKTTEIVRRIGQRI---AAVANRPDFEWEFNVIESETQNAFCLPGGKVAVYTGILPVCEN----------EAGLAVVMSHEVAHAIARHGGERMTYETAKNAGKSALSYFMQKQDEQKQKIVLAAYGGGAQYGVILPFSRKHEMEADQIGIMLMAKAGYDPSEAPVFWERFGSAKTGTAPMEWMSTHPSDAHRSAALRELL 243
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: UPI001891E830 (mitochondrial metalloendopeptidase OMA1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891E830) HSP 1 Score: 92.8 bits (229), Expect = 5.450e-20 Identity = 63/161 (39.13%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 163 EFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSP-LLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV------MGSLPTSAVEWTSTHPTSPKRARRL 624
E VV + +NA CAP GK+ YTG L+DK + +A + AV+ HE HAIARH+AEKL+ + ++ ++ +P L+ L ++L++LPFSR ME+EAD +G++L+ G DPR+A V +G + E+ STHP S KR + L
Sbjct: 11 EVIVVDNKQVNAMCAPGGKIIVYTG-------LLDKF---NTDAEIAAVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLSLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLGKVGGNSSPLKEYMSTHPCSKKRTQLL 161
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A3L7U8A2_9BACT (M48 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7U8A2_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 7.180e-20 Identity = 69/229 (30.13%), Postives = 117/229 (51.09%), Query Frame = 1
Query: 1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSL--QSLVYMLRSSSPLLSSLV--------DFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTVM-----GSLPTSAVEWTSTHPTSPKRARRLQEII 636
+L SP+ E MG ++ + + ++ ++ ++G+++ AA P + EF V++ E NA+C P GK+A YTG+ + EAGL VM+HE HAIARH E+++ +L ++ Y+++ +V D+ V LP+SR E+EAD++G++LM G DP A T+ +EW STHP+ +R+ L+E++
Sbjct: 47 LLSSPESENAMGLTAYQEVLKSEPLTKNEKATEIVRRIGQRI---AAVANRPDFDWEFNVIESETQNAFCLPGGKVAVYTGILPVCQN----------EAGLAVVMSHEVAHAIARHGGERMTYQSAQNLGKSAVGYVMQKQDEQKQKIVLTAYGAASDYGVILPYSRKHEMEADQIGIMLMAKAGYDPSEAPVFWERFADAKTGTTPMEWMSTHPSDVRRSVALRELM 262
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A2D5JAK0_9PROT (Peptidase M48 family protein n=1 Tax=Arcobacter sp. TaxID=1872629 RepID=A0A2D5JAK0_9PROT) HSP 1 Score: 93.6 bits (231), Expect = 1.130e-19 Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 1
Query: 1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFL--------------VTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV---MGSLPTSAVEWTSTHPTSPKRARRLQEIIA 639
+ +S Q EL +G +K K K+ + AR + +G K+ AAA P + EF +V+ AMNA+C P GK+ YTG+ A + +A L VM+HE HA+ARH AE++STS +Q V +L + L ++ +F V LP+ R E EADE+G+ LMV G +P A+ M + S+ E+ STHP+S R + ++ +IA
Sbjct: 33 IFMSSQEELALGEQSYKQALSKAKIINNTYDARRVKSIGAKI---AAAANRPDFKWEFTLVENTAMNAFCLPGGKVVVYTGILKAAKN----------DAQLATVMSHEVAHALARHGAERVSTS---KIQQGVQLL-GNVVLATTAPEFTNTFNQAYGVGTQLGVMLPYGRLQESEADEIGIYLMVKAGYNPYEALKFWENMSNGKESSNEFFSTHPSSETRIQDIKNVIA 247
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: W2PY52_PHYPN (Peptidase_M48 domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2PY52_PHYPN) HSP 1 Score: 92.4 bits (228), Expect = 1.520e-18 Identity = 62/161 (38.51%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 193 NAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVA------VTVMGSLPTSA-------VEWTSTHPTSPKRARRLQEII 636
NA CAP GK+ TG+ ++ V KG S L VMAHE GHA+ARH+AE +S P L L ++L SPLL + F LPFSR+ E EAD +G++L+ DP A T + P + +W STHP++ KR R L ++
Sbjct: 114 NACCAPGGKIIVQTGILDLIDFAVQKGICHSKHDALAVVMAHEIGHALARHTAESMSMLP---LMYLQFILGMESPLLKYIFQFAFNLPFSRSQEAEADHIGIMLLASACYDPSEAPRLWKAFTAFYADPEAGENELDMDFDWVSTHPSNRKRERALDGLV 271
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A2D4BWF0_PYTIN (Neutral zinc metallopeptidase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWF0_PYTIN) HSP 1 Score: 92.4 bits (228), Expect = 2.420e-18 Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 1
Query: 16 QIELTMGRMLFKAEKGKVDASDPRARMLTKVGKKL-SVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVT---VMGSLPTSAVE--------------WTSTHPTSPKRARRLQEI 633
+IEL + + + K+ + PR RM V +L SV+ + V NA C P GKM Y+G+ ++ V+KG + + L ++AHE HA+ARH+AE++S P +QS++ + SPLL + +F + LPFSR E+EAD +G++LM DPR A GS+ + V+ + STHP++ KR R L+ +
Sbjct: 106 EIELGVKAAAEELKNAKIITTGPRVRMCVDVAARLVSVSEHLFPRQYDWRVWLVDAPSVANACCFPGGKMIIYSGILDVVDAAVEKGLVDNKHDALAVILAHEIAHALARHTAERMSFLPLLYIQSVLGL---QSPLLQYIFEFAMNLPFSRKQEMEADHIGLMLMASACYDPRTASKFWKAFGSVLKTQVDGDSTDDDSDDIDXDFFSTHPSNKKRERVLESL 326
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: H3GCZ4_PHYRM (Peptidase_M48 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCZ4_PHYRM) HSP 1 Score: 92.0 bits (227), Expect = 3.060e-18 Identity = 62/161 (38.51%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 193 NAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVA------VTVMGSLPTSA-------VEWTSTHPTSPKRARRLQEII 636
NA CAP GK+ TG+ ++ V KG S L VMAHE GHA+ARH+AE +S P L L ++L SPLL + F LPFSR+ E EAD +G++L+ DP A T + P + +W STHP++ KR R L ++
Sbjct: 160 NACCAPGGKIILQTGILDLIDFAVQKGICHSKHDALAVVMAHEIGHALARHTAESMSMLP---LMYLQFILGMESPLLKYIFQFAFNLPFSRSQEAEADHIGIMLLASACYDPSEAPRLWKAFTAFYADPEAGEDELDMDFDWVSTHPSNRKRERALDGLV 317
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A3L7NBJ1_9BACT (M48 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NBJ1_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 3.760e-18 Identity = 72/225 (32.00%), Postives = 112/225 (49.78%), Query Frame = 1
Query: 16 QIELTMGRMLFKAEKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLS--TSPPPSLQSLVYMLRSSSPLLSSLV--------DFLVTLPFSRNMELEADELGVVLMVLLGQDP--------RVAVTVMGSLPTSAVEWTSTHPTSPKRARRLQEII 636
++ LT + + K E V ++ M+ +VG++++ A P + EF V++ E NA+C P GK+A YTG+ E EAGL VM+HE HAIARH E+++ T+ Q++ Y + ++ ++ V LP+SR ELEADE+G++LM G DP R + + G+ P +EW STHP RA L+ +
Sbjct: 55 EMGLTAYQEILKEEP--VTKNEKAIEMVRRVGQRIADVA---NQPDFKWEFNVIESETQNAFCLPGGKVAVYTGILPVCES----------EAGLAVVMSHEVAHAIARHGGERMTYQTAQNMGKQAVGYFTQKQEEQKKQIILTAYGAASEYGVILPYSRKHELEADEIGILLMAKAGYDPSEAPVFWERFSGSKQGAAP---MEWMSTHPADATRAAALRSQL 261
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A6A7KM71_9PROT (M48 family metalloprotease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KM71_9PROT) HSP 1 Score: 89.7 bits (221), Expect = 4.390e-18 Identity = 74/222 (33.33%), Postives = 108/222 (48.65%), Query Frame = 1
Query: 1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTL----PFSRNMELEADELGVVLMVLLGQDPRVAVTV---MGSLPTS-AVEWTSTHPTSPKRARRLQEII 636
+L+S MG ++ ++ K+ + +VG+++ AA G P EF V++ + NA+ P GK+ +TG+F K+ + L VMAHE GHAIARHSAE++S L + S L+ L TL PFSR E EAD +GV++M G DPR AVT+ G L A E+ STHP R + +Q ++
Sbjct: 48 ILMSDSQATEMGLAAYQQILKESKISPDKAMNERVRRVGQRI---AAVSGRPDLPWEFNVIQDDTPNAFALPGGKVGVHTGLF----------KVAQNDDQLATVMAHEVGHAIARHSAERVSQQMALQLGLAGLGMAGSGAQLAQLAGSAATLGVVLPFSRKQEAEADHIGVIMMAKAGYDPRAAVTLWQNFGKLGGDRAPEFLSTHPAPASRIQEIQALM 256
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A453Q433_AEGTS (Peptidase_M48 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453Q433_AEGTS) HSP 1 Score: 90.1 bits (222), Expect = 4.840e-18 Identity = 62/161 (38.51%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 163 EFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSP-LLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV------MGSLPTSAVEWTSTHPTSPKRARRL 624
E VV + +NA CAP GK+ YTG L+DK + +A + V+ HE HAIARH+AEKL+ + ++ ++ +P L+ L ++L+ LPFSR ME+EAD +G++L+ G DPR+A V +G + E+ STHP S KR + L
Sbjct: 124 EVIVVDNKQVNAMCAPGGKIIVYTG-------LLDKF---NTDAEIATVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLGLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLGKVGGNSSPLKEYMSTHPCSKKRTQLL 274 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1068.917.1 >prot_S-firma_F_contig1068.917.1 ID=prot_S-firma_F_contig1068.917.1|Name=mRNA_S-firma_F_contig1068.917.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=203bp MGRMLFKAEKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKback to top mRNA from alignment at S-firma_F_contig1068:87..774+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1068.917.1 ID=mRNA_S-firma_F_contig1068.917.1|Name=mRNA_S-firma_F_contig1068.917.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=688bp|location=Sequence derived from alignment at S-firma_F_contig1068:87..774+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1068:87..774+ >mRNA_S-firma_F_contig1068.917.1 ID=mRNA_S-firma_F_contig1068.917.1|Name=mRNA_S-firma_F_contig1068.917.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1218bp|location=Sequence derived from alignment at S-firma_F_contig1068:87..774+ (Sphaerotrichia firma ET2_F female)back to top |