mRNA_S-firma_F_contig1068.917.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1068.917.1
Unique NamemRNA_S-firma_F_contig1068.917.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A3L7VMA8_9BACT (M48 family peptidase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7VMA8_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 1.900e-20
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 1
Query:    1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLS--TSPPPSLQSLVYMLRSSSPLLSSLV--------DFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV---MGSLPTSA--VEWTSTHPTSPKRARRLQEII 636
            ++ S Q E  MG   ++   +   +  ++    ++ ++G+++   AA    P  E EF V++ E  NA+C P GK+A YTG+    E           EAGL  VM+HE  HAIARH  E+++  T+      +L Y ++        +V         + V LPFSR  E+EAD++G++LM   G DP  A       GS  T    +EW STHP+   R+  L+E++
Sbjct:   28 LITSEQSENAMGLTAYQEVLKSEPLTKNEKTTEIVRRIGQRI---AAVANRPDFEWEFNVIESETQNAFCLPGGKVAVYTGILPVCEN----------EAGLAVVMSHEVAHAIARHGGERMTYETAKNAGKSALSYFMQKQDEQKQKIVLAAYGGGAQYGVILPFSRKHEMEADQIGIMLMAKAGYDPSEAPVFWERFGSAKTGTAPMEWMSTHPSDAHRSAALRELL 243          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: UPI001891E830 (mitochondrial metalloendopeptidase OMA1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891E830)

HSP 1 Score: 92.8 bits (229), Expect = 5.450e-20
Identity = 63/161 (39.13%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  163 EFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSP-LLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV------MGSLPTSAVEWTSTHPTSPKRARRL 624
            E  VV  + +NA CAP GK+  YTG       L+DK    + +A + AV+ HE  HAIARH+AEKL+      + ++  ++   +P L+  L ++L++LPFSR ME+EAD +G++L+   G DPR+A  V      +G   +   E+ STHP S KR + L
Sbjct:   11 EVIVVDNKQVNAMCAPGGKIIVYTG-------LLDKF---NTDAEIAAVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLSLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLGKVGGNSSPLKEYMSTHPCSKKRTQLL 161          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A3L7U8A2_9BACT (M48 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7U8A2_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 7.180e-20
Identity = 69/229 (30.13%), Postives = 117/229 (51.09%), Query Frame = 1
Query:    1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSL--QSLVYMLRSSSPLLSSLV--------DFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTVM-----GSLPTSAVEWTSTHPTSPKRARRLQEII 636
            +L SP+ E  MG   ++   +   +  ++    ++ ++G+++   AA    P  + EF V++ E  NA+C P GK+A YTG+    +           EAGL  VM+HE  HAIARH  E+++     +L   ++ Y+++        +V        D+ V LP+SR  E+EAD++G++LM   G DP  A             T+ +EW STHP+  +R+  L+E++
Sbjct:   47 LLSSPESENAMGLTAYQEVLKSEPLTKNEKATEIVRRIGQRI---AAVANRPDFDWEFNVIESETQNAFCLPGGKVAVYTGILPVCQN----------EAGLAVVMSHEVAHAIARHGGERMTYQSAQNLGKSAVGYVMQKQDEQKQKIVLTAYGAASDYGVILPYSRKHEMEADQIGIMLMAKAGYDPSEAPVFWERFADAKTGTTPMEWMSTHPSDVRRSVALRELM 262          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A2D5JAK0_9PROT (Peptidase M48 family protein n=1 Tax=Arcobacter sp. TaxID=1872629 RepID=A0A2D5JAK0_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 1.130e-19
Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 1
Query:    1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFL--------------VTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV---MGSLPTSAVEWTSTHPTSPKRARRLQEIIA 639
            + +S Q EL +G   +K    K K+  +   AR +  +G K+   AAA   P  + EF +V+  AMNA+C P GK+  YTG+  A +           +A L  VM+HE  HA+ARH AE++STS    +Q  V +L  +  L ++  +F               V LP+ R  E EADE+G+ LMV  G +P  A+     M +   S+ E+ STHP+S  R + ++ +IA
Sbjct:   33 IFMSSQEELALGEQSYKQALSKAKIINNTYDARRVKSIGAKI---AAAANRPDFKWEFTLVENTAMNAFCLPGGKVVVYTGILKAAKN----------DAQLATVMSHEVAHALARHGAERVSTS---KIQQGVQLL-GNVVLATTAPEFTNTFNQAYGVGTQLGVMLPYGRLQESEADEIGIYLMVKAGYNPYEALKFWENMSNGKESSNEFFSTHPSSETRIQDIKNVIA 247          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: W2PY52_PHYPN (Peptidase_M48 domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2PY52_PHYPN)

HSP 1 Score: 92.4 bits (228), Expect = 1.520e-18
Identity = 62/161 (38.51%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  193 NAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVA------VTVMGSLPTSA-------VEWTSTHPTSPKRARRLQEII 636
            NA CAP GK+   TG+   ++  V KG   S    L  VMAHE GHA+ARH+AE +S  P   L  L ++L   SPLL  +  F   LPFSR+ E EAD +G++L+     DP  A       T   + P +         +W STHP++ KR R L  ++
Sbjct:  114 NACCAPGGKIIVQTGILDLIDFAVQKGICHSKHDALAVVMAHEIGHALARHTAESMSMLP---LMYLQFILGMESPLLKYIFQFAFNLPFSRSQEAEADHIGIMLLASACYDPSEAPRLWKAFTAFYADPEAGENELDMDFDWVSTHPSNRKRERALDGLV 271          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A2D4BWF0_PYTIN (Neutral zinc metallopeptidase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWF0_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 2.420e-18
Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 1
Query:   16 QIELTMGRMLFKAEKGKVDASDPRARMLTKVGKKL-SVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVT---VMGSLPTSAVE--------------WTSTHPTSPKRARRLQEI 633
            +IEL +     + +  K+  + PR RM   V  +L SV+            + V      NA C P GKM  Y+G+   ++  V+KG + +    L  ++AHE  HA+ARH+AE++S  P   +QS++ +    SPLL  + +F + LPFSR  E+EAD +G++LM     DPR A       GS+  + V+              + STHP++ KR R L+ +
Sbjct:  106 EIELGVKAAAEELKNAKIITTGPRVRMCVDVAARLVSVSEHLFPRQYDWRVWLVDAPSVANACCFPGGKMIIYSGILDVVDAAVEKGLVDNKHDALAVILAHEIAHALARHTAERMSFLPLLYIQSVLGL---QSPLLQYIFEFAMNLPFSRKQEMEADHIGLMLMASACYDPRTASKFWKAFGSVLKTQVDGDSTDDDSDDIDXDFFSTHPSNKKRERVLESL 326          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: H3GCZ4_PHYRM (Peptidase_M48 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCZ4_PHYRM)

HSP 1 Score: 92.0 bits (227), Expect = 3.060e-18
Identity = 62/161 (38.51%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  193 NAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVA------VTVMGSLPTSA-------VEWTSTHPTSPKRARRLQEII 636
            NA CAP GK+   TG+   ++  V KG   S    L  VMAHE GHA+ARH+AE +S  P   L  L ++L   SPLL  +  F   LPFSR+ E EAD +G++L+     DP  A       T   + P +         +W STHP++ KR R L  ++
Sbjct:  160 NACCAPGGKIILQTGILDLIDFAVQKGICHSKHDALAVVMAHEIGHALARHTAESMSMLP---LMYLQFILGMESPLLKYIFQFAFNLPFSRSQEAEADHIGIMLLASACYDPSEAPRLWKAFTAFYADPEAGEDELDMDFDWVSTHPSNRKRERALDGLV 317          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A3L7NBJ1_9BACT (M48 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NBJ1_9BACT)

HSP 1 Score: 90.1 bits (222), Expect = 3.760e-18
Identity = 72/225 (32.00%), Postives = 112/225 (49.78%), Query Frame = 1
Query:   16 QIELTMGRMLFKAEKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLS--TSPPPSLQSLVYMLRSSSPLLSSLV--------DFLVTLPFSRNMELEADELGVVLMVLLGQDP--------RVAVTVMGSLPTSAVEWTSTHPTSPKRARRLQEII 636
            ++ LT  + + K E   V  ++    M+ +VG++++  A     P  + EF V++ E  NA+C P GK+A YTG+    E           EAGL  VM+HE  HAIARH  E+++  T+     Q++ Y  +        ++        ++ V LP+SR  ELEADE+G++LM   G DP        R + +  G+ P   +EW STHP    RA  L+  +
Sbjct:   55 EMGLTAYQEILKEEP--VTKNEKAIEMVRRVGQRIADVA---NQPDFKWEFNVIESETQNAFCLPGGKVAVYTGILPVCES----------EAGLAVVMSHEVAHAIARHGGERMTYQTAQNMGKQAVGYFTQKQEEQKKQIILTAYGAASEYGVILPYSRKHELEADEIGILLMAKAGYDPSEAPVFWERFSGSKQGAAP---MEWMSTHPADATRAAALRSQL 261          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A6A7KM71_9PROT (M48 family metalloprotease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KM71_9PROT)

HSP 1 Score: 89.7 bits (221), Expect = 4.390e-18
Identity = 74/222 (33.33%), Postives = 108/222 (48.65%), Query Frame = 1
Query:    1 VLVSPQIELTMGRMLFKA--EKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTL----PFSRNMELEADELGVVLMVLLGQDPRVAVTV---MGSLPTS-AVEWTSTHPTSPKRARRLQEII 636
            +L+S      MG   ++   ++ K+         + +VG+++   AA  G P    EF V++ +  NA+  P GK+  +TG+F          K+   +  L  VMAHE GHAIARHSAE++S      L      +  S   L+ L     TL    PFSR  E EAD +GV++M   G DPR AVT+    G L    A E+ STHP    R + +Q ++
Sbjct:   48 ILMSDSQATEMGLAAYQQILKESKISPDKAMNERVRRVGQRI---AAVSGRPDLPWEFNVIQDDTPNAFALPGGKVGVHTGLF----------KVAQNDDQLATVMAHEVGHAIARHSAERVSQQMALQLGLAGLGMAGSGAQLAQLAGSAATLGVVLPFSRKQEAEADHIGVIMMAKAGYDPRAAVTLWQNFGKLGGDRAPEFLSTHPAPASRIQEIQALM 256          
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Match: A0A453Q433_AEGTS (Peptidase_M48 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453Q433_AEGTS)

HSP 1 Score: 90.1 bits (222), Expect = 4.840e-18
Identity = 62/161 (38.51%), Postives = 92/161 (57.14%), Query Frame = 1
Query:  163 EFAVVKREAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGHAIARHSAEKLSTSPPPSLQSLVYMLRSSSP-LLSSLVDFLVTLPFSRNMELEADELGVVLMVLLGQDPRVAVTV------MGSLPTSAVEWTSTHPTSPKRARRL 624
            E  VV  + +NA CAP GK+  YTG       L+DK    + +A +  V+ HE  HAIARH+AEKL+      + ++  ++   +P L+  L ++L+ LPFSR ME+EAD +G++L+   G DPR+A  V      +G   +   E+ STHP S KR + L
Sbjct:  124 EVIVVDNKQVNAMCAPGGKIIVYTG-------LLDKF---NTDAEIATVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLGLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLGKVGGNSSPLKEYMSTHPCSKKRTQLL 274          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1068.917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L7VMA8_9BACT1.900e-2031.88M48 family peptidase n=2 Tax=Planctomycetes TaxID=... [more]
UPI001891E8305.450e-2039.13mitochondrial metalloendopeptidase OMA1-like n=1 T... [more]
A0A3L7U8A2_9BACT7.180e-2030.13M48 family peptidase n=1 Tax=Planctomycetes bacter... [more]
A0A2D5JAK0_9PROT1.130e-1934.05Peptidase M48 family protein n=1 Tax=Arcobacter sp... [more]
W2PY52_PHYPN1.520e-1838.51Peptidase_M48 domain-containing protein n=20 Tax=P... [more]
A0A2D4BWF0_PYTIN2.420e-1832.14Neutral zinc metallopeptidase n=1 Tax=Pythium insi... [more]
H3GCZ4_PHYRM3.060e-1838.51Peptidase_M48 domain-containing protein n=1 Tax=Ph... [more]
A0A3L7NBJ1_9BACT3.760e-1832.00M48 family peptidase n=1 Tax=Planctomycetes bacter... [more]
A0A6A7KM71_9PROT4.390e-1833.33M48 family metalloprotease n=1 Tax=Alphaproteobact... [more]
A0A453Q433_AEGTS4.840e-1838.51Peptidase_M48 domain-containing protein n=1 Tax=Ae... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1068contigS-firma_F_contig1068:87..774 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog4572.TRIUR3_34226-P1
PFAMsPeptidase_M48
Max annot lvl35493|Streptophyta
Evalue1.6e-19
EggNOG OGsCOG0501@1|root,KOG2661@2759|Eukaryota,37KS4@33090|Viridiplantae,3G796@35493|Streptophyta,3KTVB@4447|Liliopsida,3I63G@38820|Poales
DescriptionMitochondrial metalloendopeptidase OMA1
COG categoryO
Hectar predicted targeting categoryother localisation
Exons2
Model size639
Cds size609
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1068.917.1prot_S-firma_F_contig1068.917.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1068 117..774 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815607.3285441-UTR-S-firma_F_contig1068:86..1161622815607.3285441-UTR-S-firma_F_contig1068:86..116Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1068 87..116 +
1696949450.0823271-UTR-S-firma_F_contig1068:86..1161696949450.0823271-UTR-S-firma_F_contig1068:86..116Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1068 87..116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815607.3410518-CDS-S-firma_F_contig1068:116..4491622815607.3410518-CDS-S-firma_F_contig1068:116..449Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1068 117..449 +
1696949450.0941513-CDS-S-firma_F_contig1068:116..4491696949450.0941513-CDS-S-firma_F_contig1068:116..449Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1068 117..449 +
1622815607.3539732-CDS-S-firma_F_contig1068:498..7741622815607.3539732-CDS-S-firma_F_contig1068:498..774Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1068 499..774 +
1696949450.1070426-CDS-S-firma_F_contig1068:498..7741696949450.1070426-CDS-S-firma_F_contig1068:498..774Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1068 499..774 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1068.917.1

>prot_S-firma_F_contig1068.917.1 ID=prot_S-firma_F_contig1068.917.1|Name=mRNA_S-firma_F_contig1068.917.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=203bp
MGRMLFKAEKGKVDASDPRARMLTKVGKKLSVAAAALGAPLAEPEFAVVK
REAMNAYCAPAGKMAAYTGMFAALEKLVDKGKIPSVEAGLMAVMAHETGH
AIARHSAEKLSTSPPPSLQSLVYMLRSSSPLLSSLVDFLVTLPFSRNMEL
EADELGVVLMVLLGQDPRVAVTVMGSLPTSAVEWTSTHPTSPKRARRLQE
IIA
back to top

mRNA from alignment at S-firma_F_contig1068:87..774+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1068.917.1 ID=mRNA_S-firma_F_contig1068.917.1|Name=mRNA_S-firma_F_contig1068.917.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=688bp|location=Sequence derived from alignment at S-firma_F_contig1068:87..774+ (Sphaerotrichia firma ET2_F female)
GTGCTGGTGTCGCCACAAATAGAGCTGACCATGGGGCGCATGCTGTTCAA AGCTGAGAAAGGGAAAGTGGACGCGTCTGACCCAAGGGCTCGCATGCTGA CCAAGGTGGGGAAGAAGCTTAGTGTTGCCGCCGCCGCGCTGGGGGCGCCC CTCGCGGAACCCGAGTTTGCTGTCGTGAAGCGAGAGGCTATGAACGCGTA CTGTGCCCCGGCCGGGAAAATGGCTGCTTACACAGGCATGTTCGCTGCGC TGGAGAAACTGGTTGACAAGGGCAAAATCCCCAGCGTTGAGGCGGGGTTG ATGGCGGTCATGGCCCACGAAACCGGGCACGCGATTGCCCGCCACTCTGC TGAAAAACTGTCTGTCATGACGGTGCCAATGGTGAGTCCACGCACACCTC CAGCCGCTGAAGACGTCACCCCCTCCCTCCCTCCAGTCCCTGGTGTACAT GTTGAGGAGCAGCTCCCCGCTGCTGTCGTCCCTGGTCGACTTTTTGGTCA CCCTGCCCTTCAGCCGCAACATGGAGCTGGAGGCGGACGAGCTGGGTGTG GTGCTCATGGTGTTGTTGGGGCAGGACCCGCGGGTGGCGGTGACGGTGAT GGGGTCCCTTCCCACCTCCGCCGTGGAGTGGACCAGCACCCACCCCACCT CGCCCAAACGAGCCAGGCGCCTCCAGGAAATCATTGCA
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig1068:87..774+

>mRNA_S-firma_F_contig1068.917.1 ID=mRNA_S-firma_F_contig1068.917.1|Name=mRNA_S-firma_F_contig1068.917.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1218bp|location=Sequence derived from alignment at S-firma_F_contig1068:87..774+ (Sphaerotrichia firma ET2_F female)
ATGGGGCGCATGCTGTTCAAAGCTGAGAAAGGGAAAGTGGACGCGTCTGA
CCCAAGGGCTCGCATGCTGACCAAGGTGGGGAAGAAGCTTAGTGTTGCCG
CCGCCGCGCTGGGGGCGCCCCTCGCGGAACCCGAGTTTGCTGTCGTGAAG
CGAGAGGCTATGAACGCGTACTGTGCCCCGGCCGGGAAAATGGCTGCTTA
CACAGGCATGTTCGCTGCGCTGGAGAAACTGGTTGACAAGGGCAAAATCC
CCAGCGTTGAGGCGGGGTTGATGGCGGTCATGGCCCACGAAACCGGGCAC
GCGATTGCCCGCCACTCTGCTGAAAAACTGTCTATGGGGCGCATGCTGTT
CAAAGCTGAGAAAGGGAAAGTGGACGCGTCTGACCCAAGGGCTCGCATGC
TGACCAAGGTGGGGAAGAAGCTTAGTGTTGCCGCCGCCGCGCTGGGGGCG
CCCCTCGCGGAACCCGAGTTTGCTGTCGTGAAGCGAGAGGCTATGAACGC
GTACTGTGCCCCGGCCGGGAAAATGGCTGCTTACACAGGCATGTTCGCTG
CGCTGGAGAAACTGGTTGACAAGGGCAAAATCCCCAGCGTTGAGGCGGGG
TTGATGGCGGTCATGGCCCACGAAACCGGGCACGCGATTGCCCGCCACTC
TGCTGAAAAACTGTCTACGTCACCCCCTCCCTCCCTCCAGTCCCTGGTGT
ACATGTTGAGGAGCAGCTCCCCGCTGCTGTCGTCCCTGGTCGACTTTTTG
GTCACCCTGCCCTTCAGCCGCAACATGGAGCTGGAGGCGGACGAGCTGGG
TGTGGTGCTCATGGTGTTGTTGGGGCAGGACCCGCGGGTGGCGGTGACGG
TGATGGGGTCCCTTCCCACCTCCGCCGTGGAGTGGACCAGCACCCACCCC
ACCTCGCCCAAACGAGCCAGGCGCCTCCAGGAAATCATTGCAACGTCACC
CCCTCCCTCCCTCCAGTCCCTGGTGTACATGTTGAGGAGCAGCTCCCCGC
TGCTGTCGTCCCTGGTCGACTTTTTGGTCACCCTGCCCTTCAGCCGCAAC
ATGGAGCTGGAGGCGGACGAGCTGGGTGTGGTGCTCATGGTGTTGTTGGG
GCAGGACCCGCGGGTGGCGGTGACGGTGATGGGGTCCCTTCCCACCTCCG
CCGTGGAGTGGACCAGCACCCACCCCACCTCGCCCAAACGAGCCAGGCGC
CTCCAGGAAATCATTGCA
back to top