mRNA_S-firma_F_contig1062.845.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 226 bits (577), Expect = 1.470e-61 Identity = 210/407 (51.60%), Postives = 265/407 (65.11%), Query Frame = 3
Query: 297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATD---TPLALTERCL--KARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTKP 1502
GN GWT LMLA+ G+ +V ++L++GA V++ XXXXXXXXXXXXXXXXXXXXXXXXX +EATT XXXXXXXXXXXXXXXXXXXXXXX +N+ R DGA+ L+TAA KG++ A R LL A+A+ LL +G T++PLD AA+NGH EV EL+R GI+GCGG SGGV AL+ AA+ ++L+IM LT AGV+DTG AL+ AA G E +LL+Q R +K + AYV +RD G TPL I PR+VRLLV+AGADTTS + +R+ G D TPL LT + K + V A+ EQ+ KLEAIRRLLL+V A AVSWLWPS ++R A G +ST + +RRRA V LA++ R+S+KP
Sbjct: 44 GNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARK----------TMDEAAYVNTRDR-GGVTPLLWGI---QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA-RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.400e-60 Identity = 159/361 (44.04%), Postives = 211/361 (58.45%), Query Frame = 3
Query: 300 NSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXX-LEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGAT---DTPLALTERCLKARNV-NGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSR 1367
NS G TPLM+A +G + + K+L+ +GA+V++ L+A GS XXXXXXXXXXXXX + PDG++ L AAE+G + +RELLR AN LL +T T VPLD AA++GH++V REL++ GIEGC S G +AL AA QHLDIM LT AGV+DTG+AL AA G E S +LL+ + ++ G G GAY+ +RD + G TPL +C C S APR+VR+LVDAGADTTS +++ ++ G DTPLA T+ L+ + V +GK AT+E + +LEAI RLLL+V A AVSWLWPS P + R
Sbjct: 136 NSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGC---------GVEGAYLNARD-VNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGR 486
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.110e-55 Identity = 187/406 (46.06%), Postives = 232/406 (57.14%), Query Frame = 3
Query: 297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATD---TPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGA-GEGARVA-GTMSTPLISTFSASRRRASRHGVSLASMFRHSTK 1499
GN GWTPLM+A+ G+ +V++LL++GA V V XXXXXXXXXXXXXXXXXXXXXXXX L+A T +NT R DGA+ L+TAA G++ AV LL A+A+ LL ++PLD AAQNGH EV EL+R GI+GCGG SGG NALR AA LDIM LT AGV+DTG AL+ AA G E +LL+Q R +K T AY+ + + + G T L I C PR+V+LLV+AGADTTS + I + PG D TPL LT L R+ K T E+ KLE IRRLLL+ A AVSWLWPS TP ++ A G G A T +TP I RR R G+ LA++ R+S+K
Sbjct: 44 GNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRA----------AYMNTLNGV-GLTSLLDGIQRCR---PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM-IGRRTRGRKGL-LAALLRYSSK 431
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 192 bits (489), Expect = 8.130e-50 Identity = 192/419 (45.82%), Postives = 242/419 (57.76%), Query Frame = 3
Query: 297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCA----SNAPRLVRLLVDAGADTTSRIRIRHVPGA---TDTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLISTFSAS----------RRRASRHGVSLASMFRHSTKP 1502
G WTPL+ AAS G + V+ +LLS+GA+V++ D XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX DG + LF A +G L A RELLRA AN L+ R T +PLD+AA+NG+ V REL++ GIEGCGGQS G AL +A G+ + M LT AGV+DTG+AL +A GRE S YLLQ + G GAYV RD G TPL I C S+ PR+ RLLV+AGADTT+ +R + G + TPL LT L+ + V+G +++++++LE IRRLLLQV A A SWLWPS++ G+G R + +T +A+ RRRA R GV ++ RH KP
Sbjct: 30 GTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPT---LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP------------GAYVNVRDR-NGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSS--------GDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 177 bits (450), Expect = 9.890e-45 Identity = 183/378 (48.41%), Postives = 216/378 (57.14%), Query Frame = 3
Query: 297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGAT---DTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLI 1421
GN +GWTPLMLA G + V K LL +GA+V+V GD XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX + +AN LL +GAT+VPLD A Q+GHSEV REL G+ GCGG SGGV +LRLA Q +DIM LT GV+DTG AL+ AAE RE S +LLQ Q +G G YV + G TPL I C S++PR+ R L+DA ADT S + + T DTPL L+ V K ATEEQ+ L+AI RLL QV A AVSWLW S+ S +R+ T++ PL+
Sbjct: 29 GNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ--------------AGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLL 391
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 164 bits (416), Expect = 4.680e-40 Identity = 118/287 (41.11%), Postives = 161/287 (56.10%), Query Frame = 3
Query: 666 LLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAG-VMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASN--APRLVRLLVDAGADTTSRIRIRHVPG----ATDTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTP--VVSRGGAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTK 1499
LLRA+AN LL + G +YVPL+ AA +G+ +VARE++R GI GCGG SGGV ALR AA +HL+ M L AG V+DTG ALI AAE GR + +LL R R A AYV G TP+ + A +P++VRLLVDAGA+TT + + + ++TPLA T R L+ V+G+AAT+EQ+ +L+ R LL + A AVSWLW S P + G + + ++TPL + RR+ GV L ++FR+S K
Sbjct: 164 LLRAKANPLLC-SHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLL------------RRRQADAD--AYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 163 bits (412), Expect = 1.660e-39 Identity = 105/250 (42.00%), Postives = 137/250 (54.80%), Query Frame = 3
Query: 750 QNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGAT---DTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLISTFSAS-RRRASRHGVSLASMFR 1487
Q+GHSEV REL++ G+ GCGG S GV +LRLAA Q++DIM LT GV+DTG AL+ AAE RE S +LLQ Q +G G YV + G TPL I C S++PR+ R L+D GADT S + + T DTPL R L+ V GK ATEEQ+ L+AI RLL Q+ A AVSWLW S+ + +R+ T + P + S R + GV L +++R
Sbjct: 189 QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ--------------AGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D8LPY3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY3_ECTSI) HSP 1 Score: 160 bits (404), Expect = 5.660e-39 Identity = 111/274 (40.51%), Postives = 154/274 (56.20%), Query Frame = 3
Query: 696 FRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHV---PGATDTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRG---GAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTK 1499
F + G+T V LD AAQ G +EV REL++H GI+ C GQ GV AL LAA+ Q +D MR L AGV+DTG++L AA+CGR+ + LLQQ+ + G YV+SR+ TPLF+ + A+ AP++VRLL+DAGA+ + + P +T L L R L G+ ATEE+M +LE +RRLLL+V RA+SWLW +T+PV + G GAR + + + A R + G LA+M R+S K
Sbjct: 130 FPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADCGRDKAVKLLLQQK-------------WATPGAGYVDSRNDYQ-CTPLFVAV---AAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLELANRNLGCEMHKGQCATEEEMNRLEEVRRLLLRVETVRAISWLWGTTSPVYAAPLGTGTNRGARGGASG----LGVYIARRETRAHCGSLLATMLRYSGK 382
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 160 bits (404), Expect = 2.010e-38 Identity = 119/284 (41.90%), Postives = 154/284 (54.23%), Query Frame = 3
Query: 672 RAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLF--MCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATD---TPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTP---LISTFSASRRRASRHGVSLASMFRHSTK 1499
RA+AN LL R + ++PLDTAAQNG V EL++ GI GCGG +GGV AL+LAA H+D+M LT AGV+DTG AL+ A G +LLQQQ GT + ++ AYV G TPL + + S +P++VRLLVDAGADTTS +R PG TPL+L L+ + KA +E + +LE IRRLLL+V A A SWLW + P V G A + ST L + RRRA G AS+ R++ K
Sbjct: 168 RAKANPLLTRVN--LAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQ---NGTPSEKS--------AYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.180e-37 Identity = 125/312 (40.06%), Postives = 166/312 (53.21%), Query Frame = 3
Query: 588 MNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPL---FMCIAFCASNA-PRLVRLLVDAGADTTSRIRIRHVPGATD-TPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPST--TPVVSRGGAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTKP 1502
+N+ R DGA+ LF AA +G++ AVR LL A+ + LL + +PLD AA GH EV EL+R GI GCGG SGGV AL+ AAR +HLD++ LT AGV+DTG A G ++ ++G L + + GAG + P F IA PR+VRLLV+AGADTTS + I +PG + TP+ LT L ++ + TEEQ+ LEAI RLLL+V A AVSWLW S S + T TPL+ T R R+ V LA++ R+S+KP
Sbjct: 43 LNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLA---------RGRRIW-------RRGPLEV----SVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPGTDNITPMGLT--MLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMR-QRARSKEREVPLAALLRYSSKP 331 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1062.845.1 >prot_S-firma_F_contig1062.845.1 ID=prot_S-firma_F_contig1062.845.1|Name=mRNA_S-firma_F_contig1062.845.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=394bp MLAASDGFTDVVKVLLSRGADVAVEGDYGYTALILATSDGYIDVCKMLVEback to top mRNA from alignment at S-firma_F_contig1062:93..3568+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1062.845.1 ID=mRNA_S-firma_F_contig1062.845.1|Name=mRNA_S-firma_F_contig1062.845.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3476bp|location=Sequence derived from alignment at S-firma_F_contig1062:93..3568+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1062:93..3568+ >mRNA_S-firma_F_contig1062.845.1 ID=mRNA_S-firma_F_contig1062.845.1|Name=mRNA_S-firma_F_contig1062.845.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2364bp|location=Sequence derived from alignment at S-firma_F_contig1062:93..3568+ (Sphaerotrichia firma ET2_F female)back to top |