mRNA_S-firma_F_contig1062.845.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1062.845.1
Unique NamemRNA_S-firma_F_contig1062.845.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.470e-61
Identity = 210/407 (51.60%), Postives = 265/407 (65.11%), Query Frame = 3
Query:  297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATD---TPLALTERCL--KARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTKP 1502
            GN  GWT LMLA+  G+  +V ++L++GA V++    XXXXXXXXXXXXXXXXXXXXXXXXX +EATT     XXXXXXXXXXXXXXXXXXXXXXX +N+ R DGA+ L+TAA KG++ A R LL A+A+ LL      +G T++PLD AA+NGH EV  EL+R  GI+GCGG SGGV AL+ AA+ ++L+IM  LT AGV+DTG AL+ AA  G E    +LL+Q R +K          +    AYV +RD   G TPL   I       PR+VRLLV+AGADTTS + +R+  G  D   TPL LT   +  K + V    A+ EQ+ KLEAIRRLLL+V A  AVSWLWPS    ++R  A  G      +ST +      +RRRA    V LA++ R+S+KP
Sbjct:   44 GNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARK----------TMDEAAYVNTRDR-GGVTPLLWGI---QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA-RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.400e-60
Identity = 159/361 (44.04%), Postives = 211/361 (58.45%), Query Frame = 3
Query:  300 NSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXX-LEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGAT---DTPLALTERCLKARNV-NGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSR 1367
            NS G TPLM+A  +G + + K+L+ +GA+V++                               L+A     GS          XXXXXXXXXXXXX  +   PDG++ L  AAE+G +  +RELLR  AN LL +T      T VPLD AA++GH++V REL++  GIEGC   S G +AL  AA  QHLDIM  LT AGV+DTG+AL  AA  G E S  +LL+ + ++ G          G  GAY+ +RD + G TPL +C   C S APR+VR+LVDAGADTTS +++ ++ G     DTPLA T+  L+ + V +GK AT+E + +LEAI RLLL+V A  AVSWLWPS  P + R
Sbjct:  136 NSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGC---------GVEGAYLNARD-VNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGR 486          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.110e-55
Identity = 187/406 (46.06%), Postives = 232/406 (57.14%), Query Frame = 3
Query:  297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATD---TPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGA-GEGARVA-GTMSTPLISTFSASRRRASRHGVSLASMFRHSTK 1499
            GN  GWTPLM+A+  G+  +V++LL++GA V V    XXXXXXXXXXXXXXXXXXXXXXXX  L+A T                             +NT R DGA+ L+TAA  G++ AV  LL A+A+ LL          ++PLD AAQNGH EV  EL+R  GI+GCGG SGG NALR AA    LDIM  LT AGV+DTG AL+ AA  G E    +LL+Q R +K T             AY+ + + + G T L   I  C    PR+V+LLV+AGADTTS + I + PG  D   TPL LT   L  R+   K  T E+  KLE IRRLLL+  A  AVSWLWPS TP ++   A G G   A  T +TP I      RR   R G+ LA++ R+S+K
Sbjct:   44 GNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRA----------AYMNTLNGV-GLTSLLDGIQRCR---PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM-IGRRTRGRKGL-LAALLRYSSK 431          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 8.130e-50
Identity = 192/419 (45.82%), Postives = 242/419 (57.76%), Query Frame = 3
Query:  297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCA----SNAPRLVRLLVDAGADTTSRIRIRHVPGA---TDTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLISTFSAS----------RRRASRHGVSLASMFRHSTKP 1502
            G    WTPL+ AAS G + V+ +LLS+GA+V++  D        XXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXX        DG + LF A  +G L A RELLRA AN L+ R    T    +PLD+AA+NG+  V REL++  GIEGCGGQS G  AL +A  G+ +  M  LT AGV+DTG+AL  +A  GRE S  YLLQ   +  G             GAYV  RD   G TPL   I  C     S+ PR+ RLLV+AGADTT+ +R  +  G    + TPL LT   L+ + V+G   +++++++LE IRRLLLQV A  A SWLWPS++        G+G R     +    +T +A+          RRRA R GV   ++ RH  KP
Sbjct:   30 GTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPT---LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP------------GAYVNVRDR-NGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSS--------GDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 9.890e-45
Identity = 183/378 (48.41%), Postives = 216/378 (57.14%), Query Frame = 3
Query:  297 GNSEGWTPLMLAASDGFTDVVKVLLSRGADVAVEGDYXXXXXXXXXXXXXXXXXXXXXXXXXXLEATTATMGSXXXXXXXXXXXXXXXXXXXXXXXXMNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGAT---DTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLI 1421
            GN +GWTPLMLA   G + V K LL +GA+V+V GD XXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXX                            + +AN LL      +GAT+VPLD A Q+GHSEV REL    G+ GCGG SGGV +LRLA   Q +DIM  LT  GV+DTG AL+ AAE  RE S  +LLQ Q              +G G  YV +     G TPL   I  C S++PR+ R L+DA ADT S + +      T   DTPL      L+   V  K ATEEQ+  L+AI RLL QV A  AVSWLW S+    S       +R+  T++ PL+
Sbjct:   29 GNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ--------------AGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLL 391          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 4.680e-40
Identity = 118/287 (41.11%), Postives = 161/287 (56.10%), Query Frame = 3
Query:  666 LLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAG-VMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASN--APRLVRLLVDAGADTTSRIRIRHVPG----ATDTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTP--VVSRGGAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTK 1499
            LLRA+AN LL  +    G +YVPL+ AA +G+ +VARE++R  GI GCGG SGGV ALR AA  +HL+ M  L  AG V+DTG ALI AAE GR  +  +LL            R R A     AYV       G TP+   +   A    +P++VRLLVDAGA+TT  + +  +       ++TPLA T R L+   V+G+AAT+EQ+ +L+  R LL +  A  AVSWLW S  P  +    G  +    +  ++TPL +     RR+    GV L ++FR+S K
Sbjct:  164 LLRAKANPLLC-SHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLL------------RRRQADAD--AYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.660e-39
Identity = 105/250 (42.00%), Postives = 137/250 (54.80%), Query Frame = 3
Query:  750 QNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGAT---DTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTPLISTFSAS-RRRASRHGVSLASMFR 1487
            Q+GHSEV REL++  G+ GCGG S GV +LRLAA  Q++DIM  LT  GV+DTG AL+ AAE  RE S  +LLQ Q              +G G  YV +     G TPL   I  C S++PR+ R L+D GADT S + +      T   DTPL    R L+   V GK ATEEQ+  L+AI RLL Q+ A  AVSWLW S+   +        +R+  T + P +   S   R    + GV L +++R
Sbjct:  189 QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ--------------AGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D8LPY3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY3_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 5.660e-39
Identity = 111/274 (40.51%), Postives = 154/274 (56.20%), Query Frame = 3
Query:  696 FRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHV---PGATDTPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRG---GAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTK 1499
            F   +  G+T V LD AAQ G +EV REL++H GI+ C GQ  GV AL LAA+ Q +D MR L  AGV+DTG++L  AA+CGR+ +   LLQQ+              +  G  YV+SR+     TPLF+ +   A+ AP++VRLL+DAGA+      + +    P   +T L L  R L      G+ ATEE+M +LE +RRLLL+V   RA+SWLW +T+PV +     G   GAR   +     +  + A R   +  G  LA+M R+S K
Sbjct:  130 FPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADCGRDKAVKLLLQQK-------------WATPGAGYVDSRNDYQ-CTPLFVAV---AAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLELANRNLGCEMHKGQCATEEEMNRLEEVRRLLLRVETVRAISWLWGTTSPVYAAPLGTGTNRGARGGASG----LGVYIARRETRAHCGSLLATMLRYSGK 382          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 2.010e-38
Identity = 119/284 (41.90%), Postives = 154/284 (54.23%), Query Frame = 3
Query:  672 RAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPLF--MCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATD---TPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGGAGEGARVAGTMSTP---LISTFSASRRRASRHGVSLASMFRHSTK 1499
            RA+AN LL R +      ++PLDTAAQNG   V  EL++  GI GCGG +GGV AL+LAA   H+D+M  LT AGV+DTG AL+ A   G      +LLQQQ    GT + ++        AYV       G TPL   + +    S +P++VRLLVDAGADTTS +R    PG      TPL+L    L+ +    KA  +E + +LE IRRLLL+V A  A SWLW +  P V     G  A    + ST    L +     RRRA   G   AS+ R++ K
Sbjct:  168 RAKANPLLTRVN--LAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQ---NGTPSEKS--------AYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.180e-37
Identity = 125/312 (40.06%), Postives = 166/312 (53.21%), Query Frame = 3
Query:  588 MNTCRPDGASVLFTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVARELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALINAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGATPL---FMCIAFCASNA-PRLVRLLVDAGADTTSRIRIRHVPGATD-TPLALTERCLKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPST--TPVVSRGGAGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTKP 1502
            +N+ R DGA+ LF AA +G++ AVR LL A+ + LL      +    +PLD AA  GH EV  EL+R  GI GCGG SGGV AL+ AAR +HLD++  LT AGV+DTG A          G  ++       ++G L +    + GAG        +     P    F  IA       PR+VRLLV+AGADTTS + I  +PG  + TP+ LT   L   ++  +  TEEQ+  LEAI RLLL+V A  AVSWLW S       S     +      T  TPL+ T    R R+    V LA++ R+S+KP
Sbjct:   43 LNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLA---------RGRRIW-------RRGPLEV----SVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPGTDNITPMGLT--MLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMR-QRARSKEREVPLAALLRYSSKP 331          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1062.845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE1.470e-6151.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI1.400e-6044.04EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KQV0_9PHAE1.110e-5546.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI8.130e-5045.82EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE9.890e-4548.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1H7_ECTSI4.680e-4041.11EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7G1U9_ECTSI1.660e-3942.00EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LPY3_ECTSI5.660e-3940.51EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVK3_ECTSI2.010e-3841.90EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXY7_ECTSI2.180e-3740.06EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1062contigS-firma_F_contig1062:93..3568 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FT11
PFAMsAnk_2,Ank_4
Max annot lvl2759|Eukaryota
Evalue8.87e-67
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
COG categoryI
Hectar predicted targeting categoryother localisation
Exons2
Model size3174
Cds size1182
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1062.845.1prot_S-firma_F_contig1062.845.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1062 416..1899 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815600.752516-UTR-S-firma_F_contig1062:92..4151622815600.752516-UTR-S-firma_F_contig1062:92..415Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1062 93..415 +
1696949445.298063-UTR-S-firma_F_contig1062:92..4151696949445.298063-UTR-S-firma_F_contig1062:92..415Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1062 93..415 +
1622815600.7854624-UTR-S-firma_F_contig1062:1899..35681622815600.7854624-UTR-S-firma_F_contig1062:1899..3568Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1062 1900..3568 +
1696949445.340561-UTR-S-firma_F_contig1062:1899..35681696949445.340561-UTR-S-firma_F_contig1062:1899..3568Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1062 1900..3568 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815600.7641008-CDS-S-firma_F_contig1062:415..15781622815600.7641008-CDS-S-firma_F_contig1062:415..1578Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1062 416..1578 +
1696949445.3135736-CDS-S-firma_F_contig1062:415..15781696949445.3135736-CDS-S-firma_F_contig1062:415..1578Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1062 416..1578 +
1622815600.7748837-CDS-S-firma_F_contig1062:1880..18991622815600.7748837-CDS-S-firma_F_contig1062:1880..1899Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1062 1881..1899 +
1696949445.3285673-CDS-S-firma_F_contig1062:1880..18991696949445.3285673-CDS-S-firma_F_contig1062:1880..1899Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1062 1881..1899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1062.845.1

>prot_S-firma_F_contig1062.845.1 ID=prot_S-firma_F_contig1062.845.1|Name=mRNA_S-firma_F_contig1062.845.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=394bp
MLAASDGFTDVVKVLLSRGADVAVEGDYGYTALILATSDGYIDVCKMLVE
AGSDLEATTATMGSTPLHLAGEGGNLELMRVFMEAGADMNTCRPDGASVL
FTAAEKGHLGAVRELLRAEANALLFRTDRQTGATYVPLDTAAQNGHSEVA
RELVRHAGIEGCGGQSGGVNALRLAARGQHLDIMRELTGAGVMDTGEALI
NAAECGREGSALYLLQQQRQQKGTLALRNRNASGAGGAYVESRDSLTGAT
PLFMCIAFCASNAPRLVRLLVDAGADTTSRIRIRHVPGATDTPLALTERC
LKARNVNGKAATEEQMFKLEAIRRLLLQVPAARAVSWLWPSTTPVVSRGG
AGEGARVAGTMSTPLISTFSASRRRASRHGVSLASMFRHSTKP*
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mRNA from alignment at S-firma_F_contig1062:93..3568+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1062.845.1 ID=mRNA_S-firma_F_contig1062.845.1|Name=mRNA_S-firma_F_contig1062.845.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3476bp|location=Sequence derived from alignment at S-firma_F_contig1062:93..3568+ (Sphaerotrichia firma ET2_F female)
GGGTGCGGTGCTATCCTTTGTAATCCCTACTTGATCACAATTGATTTCAA GAGAGTTTTACGTTCGGCCCCTCGTGTTAGCTAAAAAAAAAACACCACCG GGTGCTGCGTTGTGTGTGGTGTGTGCGGTCTTGTGTCGTACACGGCGTGA AGGTATGTTGCTGCTGTCATCGTAGTCTTGGCCTCAAAACAAGAAGGTGC TGCTGGCGTTGCGGCTGGCATTCTACAACACGGCTCTTTCTTCTAGACCA AAAAAATCCTGTTTGTGCACCCCCAACGGCCGTGGCATCGCCCACAGGCA ACTCCGAAGGCTGGACGCCCCTAATGCTAGCGGCCTCGGACGGGTTCACC GATGTCGTCAAGGTCCTCCTTTCCCGGGGTGCCGACGTGGCCGTGGAGGG CGACTACGGCTACACCGCCCTGATCCTGGCAACGTCGGACGGCTACATCG ACGTCTGCAAGATGCTGGTAGAAGCCGGCTCGGACCTAGAGGCCACCACC GCCACCATGGGCTCGACCCCGCTCCACCTGGCCGGGGAGGGCGGCAACCT GGAGCTCATGCGGGTGTTCATGGAGGCGGGCGCGGACATGAACACGTGCA GGCCCGACGGAGCGTCCGTGCTGTTCACCGCCGCCGAGAAGGGGCACCTG GGCGCGGTCAGGGAGCTCCTGCGCGCGGAGGCGAACGCGCTGCTTTTCAG GACAGACCGGCAAACGGGCGCCACGTACGTCCCGCTCGACACGGCGGCGC AGAACGGCCACTCGGAGGTGGCGCGGGAGCTGGTCCGGCACGCCGGGATC GAGGGCTGCGGCGGGCAGAGCGGCGGGGTGAACGCTCTCCGGCTGGCCGC GCGCGGGCAGCACCTGGACATCATGAGGGAGTTGACCGGGGCCGGGGTTA TGGACACGGGGGAGGCCCTCATAAACGCCGCCGAATGCGGCCGCGAGGGG TCCGCGCTGTACCTCTTGCAGCAGCAGCGGCAGCAGAAGGGGACCCTGGC CTTGCGAAATAGAAACGCCTCCGGCGCGGGAGGGGCGTACGTGGAGAGCC GCGACTCCCTCACGGGCGCTACGCCCTTGTTCATGTGCATCGCGTTTTGC GCCTCCAACGCACCCAGGTTGGTGCGGTTGCTCGTCGACGCCGGGGCGGA CACGACCTCGAGAATTCGGATAAGGCACGTGCCCGGCGCCACCGACACGC CGCTGGCCCTCACGGAGCGGTGCCTCAAGGCGCGGAACGTCAACGGTAAG GCCGCCACCGAGGAGCAAATGTTCAAGCTGGAGGCCATCCGCCGGCTGCT CTTGCAGGTCCCCGCGGCTCGCGCCGTGTCCTGGCTGTGGCCCAGCACCA CCCCCGTCGTGTCTCGGGGCGGTGCGGGGGAAGGTGCGAGAGTCGCAGGG ACGATGTCGACACCGCTGATATCGACGTTTTCGGCCTCGAGGCGGAGGGC TAGCAGGCACGGAGTGAGCTTGGCGTCGATGTTCAGGTGAGCGAGTCCCT TCCTGTCCGTATTTTTTGTGAGGTTGGCGGTCTGGCTTGGCAACGGGTTG TGCGTGTTGTTTCTGGTGGTGGATATGTACCTGCTTGCTTGGAAGATCGC GCAGGCCAAGGCAATGGCATACGCTTGAGGCTTAACCACGCGATTTTTTC TAGTATGTGAGGGCTTGCGTTTCCAGACCGTACCCAGTCGCAGCCCTCGA GCTCCCCACACTGTTGTTGCGTGTCTCATATCTCGTGCGTTGTACTTCGC CGCTTGCTGTTTCTTCTGCACCCGCTTGGTTGCTGCAGGCATTCTACGAA GCCTTGACGTTTCGAGATTGGGCCACCCACGTGCATAAGAAGAGTGATTT CGTCGCCCCTTTGCTTGGATGAGTAGCATGAGGGCACGGCAGGCTCGGCA CTGGTTGTTGTGGTGGTGGTGGCGGCGGCGGCGGCGTGCCGCACACTGCC GCGGGGTGTGCTGTTATTTTTTCTAAGTGCTGTGCTTGTTCTCGATTTGT TTTGGTCTGTACAAGAATGGGGTCTGTACAATATGGGATGTAAAACATCT GCATGTTTTTTAAGCGGTGTTGTGTGCACGGCAACAGCCTTTCGCTTGGT GGTATTTCGCTTGTCAGGAATCGTAGGTGTCTTCGGCGCGCAACTACGTC CAAACGCCATGTTGTGGGCGGATACTATGGGCGGATGGTGTGTGCTGATA AACATGTGTGGAGAGAGTTTGCGAGTCGTTGCATGCCATACGCGTCTTGC CTGTGTTGCTTTCTTTCTTTCTTATTGGTTGGTCGCTGTAAATTAGCCCT CTTCTCTCTGCTTGCCCTTCTTTTTTGGTCGTGGGTTGAAGCCACGGTTC TCTTTAGAAGGCCCGCATCTCTCAGCCAAGGCAAAGTTTCCTAGTACTGA GTGTGGATGCTACTGATCAGGCGTTACGCAGGCCGTCTGTTCGCTGGAGA CAGTAGTCGTGGAGGTCCAGTTGGTGCAGCGACGCCGGACACGCAATCCC CTTGCGGTGGCTGGTCGACAGTTTACCTTCGCCACGTGTATTGAGGATTA ACGCAGTAAAAACTCGAGCGTTAATCCCCACAGTACAAAAGGCATGATAA ACTCTCGATCGGCCAGCGCGACGCGGATGATGTTCGACCTCGATTGCACC TTTCCGTCCTCTTCGACTTTGTCTGAACCCAGCACCACCCGACATCAAAT CACGAGCCAGGAGGTGCTTGCGATATTCGGGGGTGTTTGTTACGCAGTGC TATGCAGTGAGCTGTCAGGATATTTCTGTACGAGTCTCGGTGTGCATAGG GTCGGTATTACAGCTGAGCGTAGATTCATCGAAAGTGGAGAGATTCGCTG TAGCTGAATGCCAATATTCAGGTCTGCTGCTGCTGTAGTAGAAGTTACCT TGCAGACGATTCGTAAACATTCTACGTAGGACCGACGGATATAGAGCGTT GTCAGGCCGCTCTACTATGTTACTGTTTCCAGCTGAACATGAGAAGTCCT TGAACTTTTGCTGAAACAGTCTGGGGCTTCCTCATGCTTCTGCTGGATCA AGCACGAGAGCGGCGTTACGTTCTCTTTCTCGTGGTGTTTTGCGAATTGT TTTATTAAGAAGGAAAGGGCCCGGAACGCGGCTGCAAGTTTTTTATGCGC GTGTGCGTGATCACAAATCATCGTCTTGGCCTTGATGGTTTCGCAACGTA CACACATGACGCACGCCGCAGAGACGCCTCAGCGCAGAGGTCTGCCGCGG GTTGGCTTGTAAATTACCTCACCAAATAGGTGGAGGTGCCGAAAGAGCGG ATCTCTGCTTCCTGAAGCAATAAATGGAGTATCGTGTTTTCTCTGAGTTC GTGCGTGCATGTCAGTTGGGAAACAGACTGTACACTGGTCCACAGCAGTA GTAGCCACCTACATAGAAGGAGGTCGCTGTTGTGAGGAGATCGAACGTTC CGTGGAACGGTTATCTTGCAGAGCCT
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Coding sequence (CDS) from alignment at S-firma_F_contig1062:93..3568+

>mRNA_S-firma_F_contig1062.845.1 ID=mRNA_S-firma_F_contig1062.845.1|Name=mRNA_S-firma_F_contig1062.845.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2364bp|location=Sequence derived from alignment at S-firma_F_contig1062:93..3568+ (Sphaerotrichia firma ET2_F female)
ATGCTAGCGGCCTCGGACGGGTTCACCGATGTCGTCAAGGTCCTCCTTTC
CCGGGGTGCCGACGTGGCCGTGGAGGGCGACTACGGCTACACCGCCCTGA
TCCTGGCAACGTCGGACGGCTACATCGACGTCTGCAAGATGCTGGTAGAA
GCCGGCTCGGACCTAGAGGCCACCACCGCCACCATGGGCTCGACCCCGCT
CCACCTGGCCGGGGAGGGCGGCAACCTGGAGCTCATGCGGGTGTTCATGG
AGGCGGGCGCGGACATGAACACGTGCAGGCCCGACGGAGCGTCCGTGCTG
TTCACCGCCGCCGAGAAGGGGCACCTGGGCGCGGTCAGGGAGCTCCTGCG
CGCGGAGGCGAACGCGCTGCTTTTCAGGACAGACCGGCAAACGGGCGCCA
CGTACGTCCCGCTCGACACGGCGGCGCAGAACGGCCACTCGGAGGTGGCG
CGGGAGCTGGTCCGGCACGCCGGGATCGAGGGCTGCGGCGGGCAGAGCGG
CGGGGTGAACGCTCTCCGGCTGGCCGCGCGCGGGCAGCACCTGGACATCA
TGAGGGAGTTGACCGGGGCCGGGGTTATGGACACGGGGGAGGCCCTCATA
AACGCCGCCGAATGCGGCCGCGAGGGGTCCGCGCTGTACCTCTTGCAGCA
GCAGCGGCAGCAGAAGGGGACCCTGGCCTTGCGAAATAGAAACGCCTCCG
GCGCGGGAGGGGCGTACGTGGAGAGCCGCGACTCCCTCACGGGCGCTACG
CCCTTGTTCATGTGCATCGCGTTTTGCGCCTCCAACGCACCCAGGTTGGT
GCGGTTGCTCGTCGACGCCGGGGCGGACACGACCTCGAGAATTCGGATAA
GGCACGTGCCCGGCGCCACCGACACGCCGCTGGCCCTCACGGAGCGGTGC
CTCAAGGCGCGGAACGTCAACGGTAAGGCCGCCACCGAGGAGCAAATGTT
CAAGCTGGAGGCCATCCGCCGGCTGCTCTTGCAGGTCCCCGCGGCTCGCG
CCGTGTCCTGGCTGTGGCCCAGCACCACCCCCGTCGTGTCTCGGGGCGGT
GCGGGGGAAGGTGCGAGAGTCGCAGGGACGATGTCGACACCGCTGATATC
GACGTTTTCGGCCTCGAGGCGGAGGGCTAGCAGGCACGGAGTGAGCTTGG
CGTCGATGTTCAGATGCTAGCGGCCTCGGACGGGTTCACCGATGTCGTCA
AGGTCCTCCTTTCCCGGGGTGCCGACGTGGCCGTGGAGGGCGACTACGGC
TACACCGCCCTGATCCTGGCAACGTCGGACGGCTACATCGACGTCTGCAA
GATGCTGGTAGAAGCCGGCTCGGACCTAGAGGCCACCACCGCCACCATGG
GCTCGACCCCGCTCCACCTGGCCGGGGAGGGCGGCAACCTGGAGCTCATG
CGGGTGTTCATGGAGGCGGGCGCGGACATGAACACGTGCAGGCCCGACGG
AGCGTCCGTGCTGTTCACCGCCGCCGAGAAGGGGCACCTGGGCGCGGTCA
GGGAGCTCCTGCGCGCGGAGGCGAACGCGCTGCTTTTCAGGACAGACCGG
CAAACGGGCGCCACGTACGTCCCGCTCGACACGGCGGCGCAGAACGGCCA
CTCGGAGGTGGCGCGGGAGCTGGTCCGGCACGCCGGGATCGAGGGCTGCG
GCGGGCAGAGCGGCGGGGTGAACGCTCTCCGGCTGGCCGCGCGCGGGCAG
CACCTGGACATCATGAGGGAGTTGACCGGGGCCGGGGTTATGGACACGGG
GGAGGCCCTCATAAACGCCGCCGAATGCGGCCGCGAGGGGTCCGCGCTGT
ACCTCTTGCAGCAGCAGCGGCAGCAGAAGGGGACCCTGGCCTTGCGAAAT
AGAAACGCCTCCGGCGCGGGAGGGGCGTACGTGGAGAGCCGCGACTCCCT
CACGGGCGCTACGCCCTTGTTCATGTGCATCGCGTTTTGCGCCTCCAACG
CACCCAGGTTGGTGCGGTTGCTCGTCGACGCCGGGGCGGACACGACCTCG
AGAATTCGGATAAGGCACGTGCCCGGCGCCACCGACACGCCGCTGGCCCT
CACGGAGCGGTGCCTCAAGGCGCGGAACGTCAACGGTAAGGCCGCCACCG
AGGAGCAAATGTTCAAGCTGGAGGCCATCCGCCGGCTGCTCTTGCAGGTC
CCCGCGGCTCGCGCCGTGTCCTGGCTGTGGCCCAGCACCACCCCCGTCGT
GTCTCGGGGCGGTGCGGGGGAAGGTGCGAGAGTCGCAGGGACGATGTCGA
CACCGCTGATATCGACGTTTTCGGCCTCGAGGCGGAGGGCTAGCAGGCAC
GGAGTGAGCTTGGCGTCGATGTTCAGGCATTCTACGAAGCCTTGAGCATT
CTACGAAGCCTTGA
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