mRNA_S-firma_F_contig10585.794.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10585.794.1
Unique NamemRNA_S-firma_F_contig10585.794.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: D7FHU5_ECTSI (Insulysin isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU5_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 3.370e-120
Identity = 172/219 (78.54%), Postives = 193/219 (88.13%), Query Frame = 1
Query:    1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            SGP+RL  YNE+LV R+LDVLRP PV+YS++TP+V+STAKEF GKADK EKWYGTPYQ     +S A + +EWC PP IPAL+LPGPNPF+PRDLSVI PKGR+VKPG++  APAVVLVFPTTAGWKVRHKLDDIFAQPKVV   E+VSPVAYESPR VAALKLFE+SLDE+LNEYAYDAQMAGLGYSLDFTTRG+R+SF GF DKMPDFIEKVA AVA
Sbjct:   15 SGPSRLTSYNESLVYRLLDVLRPDPVEYSSATPLVFSTAKEFEGKADKNEKWYGTPYQV----ESLASYEKEWCSPPAIPALKLPGPNPFIPRDLSVINPKGRIVKPGDKIAAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVCNLEVVSPVAYESPRAVAALKLFELSLDERLNEYAYDAQMAGLGYSLDFTTRGLRMSFAGFSDKMPDFIEKVAQAVA 229          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A6H5JJV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV2_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 2.830e-108
Identity = 174/242 (71.90%), Postives = 190/242 (78.51%), Query Frame = 1
Query:    1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGT--PYQASPKSDSRAL---------------------F*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            SGP+RL  YNE+LV R+LDVLRP PVDYSA+TP+V+STAKEF GKADK E+WYG   P     K D RA                        REWC PP IPAL+LPGPNPF+PRDL VI PKGRVVKPGE+  APAVVLVFPTTAGWKVRHKLDDIFAQPKVV Y E+VSPVAYESPR VAALKLFE+SL+E+LNEYAYDAQMAGLGYSLDFTTRG+R+SF GF DKMPDFIEKVA AVA
Sbjct:  213 SGPSRLTSYNESLVYRLLDVLRPDPVDYSAATPLVFSTAKEFEGKADKNEEWYGRNGPTTRPTKHDYRAFGSALKRTSHANFEALVESLASHEREWCSPPEIPALKLPGPNPFIPRDLGVINPKGRVVKPGEKIAAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVCYLEVVSPVAYESPRAVAALKLFELSLEERLNEYAYDAQMAGLGYSLDFTTRGLRMSFSGFSDKMPDFIEKVAQAVA 454          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: D7FWX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX6_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.080e-64
Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1
Query:    1 SGPARLQLYNETLVRRVLDVLRPSP-VDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            SGP RLQ Y+E+ +  +L+ LR  P    S S P V  TAK+F   A ++EKW+  P+Q     +S   +  EW  PP IP  +LPGPNPF+P D+ V+ P+G++ KPGE    P VV   P    WKVRHKLDDIFAQPK    F+LVSP A+ESPRT AAL LF+  L+E L EY YDA  AGL ++L   TRG+ LSF G+GDKMP+FI+KVA AVA
Sbjct:  456 SGPCRLQRYDESFIHTLLNSLRSDPPAGSSLSRPRVTVTAKDFEEAATEREKWFDVPHQV----ESLEAYTEEWKAPPAIPEFKLPGPNPFIPEDVRVVVPEGKLPKPGEAIDPPTVVENLPNDGVWKVRHKLDDIFAQPKARCKFQLVSPAAFESPRTWAALDLFDSCLNEHLTEYTYDALTAGLSFNLSVNTRGIGLSFQGYGDKMPEFIDKVAEAVA 671          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A836CJH9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 7.550e-48
Identity = 106/221 (47.96%), Postives = 130/221 (58.82%), Query Frame = 1
Query:    1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKAD--KKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            SGP  L   ++ LV  +L  +         +TP      ++   KA   ++E+WYGT YQ      + A   R W  P  +PAL LP PNPFVPRDLSV  P  R     +++ AP    V   +  W V ++ DD+F QPK  AYFELVS  AY S   VAALKLF+MSLDE L EY+YDA  AGL YSLDFTTRG RL+FGG+ D+MPDFI  VA A A
Sbjct:  490 SGPVLLDQPDKQLVASLLAAM--------TNTPRAPPAKQQDFAKAPNLQRERWYGTQYQVERVPAAAA---RAWTAPRTVPALFLPTPNPFVPRDLSVKTPATR-----KRSAAPPPPTVVGDSPAWLVNYRADDVFGQPKAYAYFELVSAGAYASAGAVAALKLFQMSLDEALREYSYDAATAGLSYSLDFTTRGARLAFGGWSDRMPDFIAAVAAATA 694          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A6H5JLX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX7_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 5.650e-42
Identity = 86/186 (46.24%), Postives = 107/186 (57.53%), Query Frame = 1
Query:  190 DSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMA------------------------------GLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            +S   +  +W  PP IP  +LPGPNPF+P D+ VI P G++ KPGE    P VV        WKVRHKLDDIFAQPK    F+LVSP A+ESPRT AAL LF   L+E L EY YDA ++                              GL ++L   +RG+ LSF G+G+KMP+FI+KVA AVA
Sbjct:    7 ESLEAYTEQWKAPPAIPEFKLPGPNPFIPEDVRVIVPDGKLPKPGEAIDPPTVVENLSNDGVWKVRHKLDDIFAQPKARCKFQLVSPAAFESPRTWAALDLFGSCLNEHLTEYTYDALVSRFITSLALVGRYITGCREKLICVHKRNSYVGLSFNLSVNSRGIGLSFRGYGNKMPEFIDKVAEAVA 192          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A0G4H2H6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2H6_VITBC)

HSP 1 Score: 125 bits (315), Expect = 1.390e-29
Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  100 MVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            +V   AK+F G  DK E+WYGTPY+   +   R     EW +    P L  P  NPF+P D+S+     +    G Q   P ++    T   W+V +K D  F  PK    F L +     SP      +L+E+S+++ LNE+AYDA +AGL Y +DF  +G++LSFGG+ DK+ DF+E+V+  +A
Sbjct:  589 LVTCIAKDFEGTTDKTEEWYGTPYR---ERLIRETTLEEWAQQKAPPDLTYPPANPFIPSDVSL--KFSQTPDAGRQPLPPEIIRDDGT---WRVFYKGDRKFGTPKAYGLFSLSTNAPLVSPENQVLSRLYELSVNDDLNEFAYDAGLAGLSYGVDFNAKGLQLSFGGYNDKLQDFVERVSRRIA 766          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A3S5XFM2_TIGJA (Insulin-degrading enzyme n=1 Tax=Tigriopus japonicus TaxID=158387 RepID=A0A3S5XFM2_TIGJA)

HSP 1 Score: 120 bits (302), Expect = 7.190e-28
Identity = 77/214 (35.98%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   16 LQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
            L  +   LV RVL+ L P     S         +++F+  A+  EKWYGT Y + P    +    + W + PV PALRLP PNPF+P D S+         P E+   P  V++  T   ++V  K DD F  PK   YFEL SP+ Y  P      ++F   L + LNE+AYDA++AGL Y ++ T  G+ LS  G+ +K    +EK+   +A
Sbjct:  494 LSEWKPELVDRVLENLVPEKTQVSI-------ISQKFSDIANDTEKWYGTKYHSEPIPQEKL---KRWTDEPVDPALRLPPPNPFIPTDFSLA--------PREEPNLPHPVIIKDTPL-FRVWFKQDDQFLLPKSCIYFELRSPMVYLDPHHDNMTRIFVRLLQDDLNEFAYDAELAGLNYRINNTKVGLNLSIKGYNEKQSVLLEKLMSRMA 688          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A7S4U7R2_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U7R2_GUITH)

HSP 1 Score: 120 bits (300), Expect = 1.350e-27
Identity = 82/220 (37.27%), Postives = 115/220 (52.27%), Query Frame = 1
Query:    1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPV-----AYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVA 645
            SGPA  +     L + +L  L P        + M+   +KEFA  A  +E+WYGT Y       SR      W   P+   + +P PNPF+P +  +   KG +V+   +   P  +LV  +T  W++  K D  + +PK VAY  L+S          +PRT A  KL   SL + L E++YDA +AGL YS DFT RGVRL+FGG+ DK+ DF+  VA
Sbjct:  570 SGPALARDLQLDLAQELLSALTPQ-------SAMLTYASKEFAKDAKMRERWYGTSYYTEEADKSR------WGRLPLA-GVSVPQPNPFIPSNFDI---KGSIVEDLAKPAIPPSLLVDDST--WRLFFKQDRRYGKPKAVAYV-LISQFDSLLGTGTTPRTSALTKLLTASLADALTEFSYDAAVAGLQYSCDFTQRGVRLNFGGYNDKLADFLLSVA 769          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: K8YRP1_NANGC (Insulysin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRP1_NANGC)

HSP 1 Score: 116 bits (291), Expect = 2.170e-26
Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 GPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADK----KEKWYGTPYQASPKSDSRALF*REWCEPPVI-PALRLPGPNPFVPRDLSVI--KPKGRVVKPGEQAQAPAVVLVFPTTA--------------GWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAG 648
            GP  L  ++E  VR  L +L P  +  +         +K F  +A K    KEKWYGT ++     +++      W  PP I P L LP PN F+P D S+I  +P  + + P +        L+FP++A              G KV HKLD  F  PKV  +  L+S   Y SP +V   +L+ M L ++LNE+AY+A MAGL YS+   T G+ +   G+  K+P  +EKVAG
Sbjct:  614 GPYALD-WDEQAVRDYLSLLTPERMHLTV-------VSKAFEEEAQKEAWAKEKWYGTLHKLEKLPEAKVAA---WSNPPEIHPMLSLPSPNEFLPTDFSLICEQPAYKSLAPDDPVHPFPPSLLFPSSAQALPASLPASSPERGVKVFHKLDTTFKVPKVQFFAHLLSRQIYSSPPSVVLHRLYNMLLRDELNEFAYEAAMAGLSYSVTTRTTGLSVKVSGYSHKLPVLLEKVAG 838          
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: W7U2K9_9STRA (Insulin-degrading enzyme n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2K9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.220e-26
Identity = 82/236 (34.75%), Postives = 119/236 (50.42%), Query Frame = 1
Query:    4 GPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADK----KEKWYGTPYQASPKSDSRALF*REWCEPPVI-PALRLPGPNPFVPRDLSVI--KPKGRVVKPGEQAQAPAVVLVFPTTA--------------GWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAG 648
            GP  L  ++E  VR  L +L P  +  +         +K F  +A K    KEKWYGT ++     +++      W  PP I P L LP PN F+P D S+I  +P  + + P +        L+FP++A              G KV HKLD  F  PKV  +  L+S   Y SP +V   +L+ M L ++LNE+AY+A MAGL YS+   T G+ +   G+  K+P  ++KVAG
Sbjct:  315 GPYALD-WDEQAVRDYLSLLTPERMHLTV-------VSKAFEEEAQKEAWAKEKWYGTLHKLEKLPEAKVAA---WSNPPEIHPMLSLPSPNEFLPTDFSLICEQPAYKSLAPDDPVHPFPPSLLFPSSAQALPASLPASSPERGVKVFHKLDTTFKVPKVQFFAHLLSRQIYSSPPSVVLHRLYNMLLRDELNEFAYEAAMAGLSYSVTTRTTGLSVKVSGYSHKLPVLLKKVAG 539          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHU5_ECTSI3.370e-12078.54Insulysin isoform 1 n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JJV2_9PHAE2.830e-10871.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWX6_ECTSI2.080e-6452.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJH9_9STRA7.550e-4847.96Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A6H5JLX7_9PHAE5.650e-4246.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4H2H6_VITBC1.390e-2937.63Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A3S5XFM2_TIGJA7.190e-2835.98Insulin-degrading enzyme n=1 Tax=Tigriopus japonic... [more]
A0A7S4U7R2_GUITH1.350e-2737.27Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
K8YRP1_NANGC2.170e-2635.17Insulysin n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
W7U2K9_9STRA6.220e-2634.75Insulin-degrading enzyme n=1 Tax=Nannochloropsis g... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10585contigS-firma_F_contig10585:3..4217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FHU5
PFAMsPeptidase_M16,Peptidase_M16_C,Peptidase_M16_M
Max annot lvl2759|Eukaryota
KEGG koko:K01408
KEGG Pathwayko05010,map05010
Evalue5.64e-23
EggNOG OGsCOG1025@1|root,KOG0959@2759|Eukaryota
EC3.4.24.56
Descriptionmetalloendopeptidase activity
COG categoryO
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryno signal peptide or anchor
Exons4
Model size657
Cds size159
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10585.794.1prot_S-firma_F_contig10585.794.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10585 3..2325 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815595.336886-CDS-S-firma_F_contig10585:2..1161622815595.336886-CDS-S-firma_F_contig10585:2..116Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10585 3..116 -
1696949441.4635923-CDS-S-firma_F_contig10585:2..1161696949441.4635923-CDS-S-firma_F_contig10585:2..116Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10585 3..116 -
1622815595.3528051-CDS-S-firma_F_contig10585:2280..23251622815595.3528051-CDS-S-firma_F_contig10585:2280..2325Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10585 2281..2325 -
1696949441.4865673-CDS-S-firma_F_contig10585:2280..23251696949441.4865673-CDS-S-firma_F_contig10585:2280..2325Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10585 2281..2325 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815595.3678956-UTR-S-firma_F_contig10585:2325..24421622815595.3678956-UTR-S-firma_F_contig10585:2325..2442Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10585 2326..2442 -
1696949441.495571-UTR-S-firma_F_contig10585:2325..24421696949441.495571-UTR-S-firma_F_contig10585:2325..2442Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10585 2326..2442 -
1622815595.3846471-UTR-S-firma_F_contig10585:3226..33991622815595.3846471-UTR-S-firma_F_contig10585:3226..3399Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10585 3227..3399 -
1696949441.5041804-UTR-S-firma_F_contig10585:3226..33991696949441.5041804-UTR-S-firma_F_contig10585:3226..3399Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10585 3227..3399 -
1622815595.3973238-UTR-S-firma_F_contig10585:4009..42171622815595.3973238-UTR-S-firma_F_contig10585:4009..4217Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10585 4010..4217 -
1696949441.5127537-UTR-S-firma_F_contig10585:4009..42171696949441.5127537-UTR-S-firma_F_contig10585:4009..4217Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10585 4010..4217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10585.794.1

>prot_S-firma_F_contig10585.794.1 ID=prot_S-firma_F_contig10585.794.1|Name=mRNA_S-firma_F_contig10585.794.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=53bp
MSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAG
AVA
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mRNA from alignment at S-firma_F_contig10585:3..4217-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10585.794.1 ID=mRNA_S-firma_F_contig10585.794.1|Name=mRNA_S-firma_F_contig10585.794.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4215bp|location=Sequence derived from alignment at S-firma_F_contig10585:3..4217- (Sphaerotrichia firma ET2_F female)
AGCGGGCCCGCCAGGCTGCAGCTGTACAACGAGACCCTGGTGAGGCGCGT GCTGGACGTGCTCAGGCCGTCCCCGGTCGACTACTCGGCGTCCACGCCGA TGGTGTGGTCGACGGCCAAGGAGTTCGCGGGGAAGGCCGACAAGAAGGAG AAGTGGTACGGGACCCCCTACCAGGCAAGCCCAAAGAGTGATAGTCGAGC GCTTTTCTGTCTGTGTGTGTGTCTGTGTGTGTGTGTGTTTGTGTGTGTGC GTGTGTGTGTTGTTGTTGGGACCTTGTTTTGTTGCTTTGTTTGTCGGTGG CGAGCGAGCTCTCCGTAGAAGTTCCGAACGTGATGTGTTGGCGGTATGGG CTTTCCCCTAGTGTGTGGCCTGACTGGCGCGCGTGTGAAGAGGTGAGGAC CGTGCTGAGATGTCATGCTTTCGTGATGTCATGCATTTGTGCACGAAGAC GTACATCGTGGTGTGCGTTGAAACCGGGCCGAATTTTTCACGAGGCACGC GTCGCATGGTTGAGGCGCACAACTCCCAGACAAAATTTCTTTTTCCCACT ATATTACCTGCCTCGTGCATACATGTTTGGTACTTCAATTGGTTCACTCC GACAAAAAAGAACATTTTTTTTTTCCTCTCCCTTCAGTGCTTCTGTCGAC TGCCCCACTGGCCCCCATCCTCCACCACGACCAGCTAGACGACCCACCCG GGGGTCACACAGGAGGGGGGGGGGGGTTGGACCCCCTCCTACGGTTCCCG CCTACGAAATTTTCATTCATTGTTTCATTCACCCCGATCAATATAGGTCG AAAACTTGGCGTCCCAAGAGAGGGAGTGGTGCGAGCCGCCCGTCATCCCT GCCCTCAGGCTGCCGGGACCGAACCCGTTCGTTCCTCGGGACCTGAGCGT CATCAAGCCGAAGGGTAGGGTCGTCAAGCCCGGAGAACAGGCCCAGGCGC CCGCGGTGGTGCTGGTCTTCCCCACCACCGCCGGCTGGAAGGTGCGTGCG TGCTTGGGTTGGGTTGTGGGTCCCTGTTGCCGTTGTGCGGTTGCGGTTGT GGTTGTGGTCATCGGTGTTGCGGCGTGGGGGAAGGACTGCCGTGGAGCAA GGGGAGCCTGAATAGCTGGCGTGTGTGTTGCCGTACCTAGGGAACAGGCG GAGTGCTGGGTAGGATGTGGTTTTGAGAGAATATCATGGAATCCAAGGCA GAGTCTCCCCGCTTCGGAGACGGGACTCCGTGGGCTCGGAACGGTGTTCC GTGCAGTGATGTCATATTGGGGGCGGTTTTCGCGGGGACCATTTCTGAGT GAAATGAAGTTCACTTTACGTGGATTGAAGTGGATGGGATGGGCGTGTTT CAAATCGAACGGAAGGAAGACGAGTGAAAGATGTACCCGGCAGGGATCAA TGGATTGGGCGTATTTCGCATGTGTGTTGCTTTTATCATATGACTTTTGC TTTACGACTGAGACGGGCGACCTTCCTTCCCACGTGGGACCAGTGCGTCA TTTTCTTGGCTTGAGTCAACTCGATCGAACCGACATGGGGCCAAACAGGT ACCACATGTATGATGAATCGAAACGAGTCAAGCTCAACGAATTCTTCTCA CATTCTTGTTGTGCATTCTATCATACACATGAACTTGCTTTGCTCAAGTA ACGGGACTTGTTGTGCGTTCTATCGTACACATGAAGTTGCTGTGCTTCAA GTAACGGGACTTCGAGCGAAAACCCTATTAAACGCGCTCCACGGCACCCG CGAAACCTCTCGAACGACAACGCAGGTGAGGCACAAGCTCGACGACATCT TCGCCCAGCCCAAGGTCGTGGCCTACTTCGAGCTCGTGAGCCCCGTCGCC TACGAGAGCCCCCGCACCGTGGCCGCCCTTAAGCTGTTCGAGATGTCCCT CGACGAAAAGCTCAACGAGTACGCGTACGATGCCCAGGTACGTACGTACG TACGTCACTTTTGTTTTCTCGCCCCGTCTCCCCTTGCCGTGTGTGCATGC CCACCTGCGACTGCTGTGGTCTTTATCTGGTCGGTTGCCCCGGAGAAAGT TTGTTTCTCGGCGCTAAAATCGTAGGGCCGTCCTGGGAAATAGGGGTCTT CCTCCACCACCCCGGGGCGAGTAGACGTTGAACGTCGATGTCGATGTCCC CCCTCCGCCCCTCGAGAGAAGCCGCGCTGAGCATTCGATCGAGAGAGGTA TGAGCTTTTCTCGGCCTTTTCCTCAACGAAGAGCTCAGCGAGTACGCCTA CGATGCCCAGGCATGAGCTTTTTTCAGCCCATTCCACGACGAAAAGCTCA GCGAATACGCCAACGATGCTCGGGTGCGACTTGCCCACTCTTCCTATCAT ACTATTGAGGGTCTGCTCGTGTGGGTTCCTCTAAACAACGGTCTCAATTG GCTTGTTTTTTTCCGGTACTGGATTCTGTCATCTACCTCACTGACCTCTG CCCTCCACTATGACTAGCTAGACGACCCAACCGGGGTCACACGGGAGGGG GGGATGGACCCCCTCCTGTGGTGAGTATGCCTAAATGGCTCAAGGTGAAA TATTTGCTCGCGCTTTCTGCAATTTAAGTTATGTTGTTGCGGGTTGTTCG ATTTATGCCTTTGTCGATTGGCAAGGTATTCCATAGCTCACTTGATGCCT TGGCTGCTGGTGCTTTTGTTGTCGCTGCTGAAGTCCTGACGTATCCTTTG TTTCGCCTCTACCAGCATCCTACTCTTTCAGCGTGTTGTGCGGAGGGTTT GGGTACTGACCTTTTCGTTTCTTCGACAGAGAACGTTCTAGAGAATGTTC TTTTTTTTCGGTCTGTCGGTGGTCTCTTTGGATTGTTGATCTGCTGCTAA AATTTGCGCTGATGATGAGTTTTGTACCAATAAAACAAAACCTAAGATCA AAGTTTCTACAAACCACAGATACTACCGATCGACATAACAATTCGTCCAA CTCTCTCTCACGCTTTTATACATGCGAAAACCCTTGGTTCACTCATGTAT TGTGTTGTGTCGTGGATGTGCTCACAGTGCTCGATTGGAGCCGTTTGCGG CTCCCTCCTCTCCTCCTTCCCACATTCCTCGTCGATGCACCACACACACC GCCGCTCTCCAGCGTCGGGCAACGGCACTCGTCCCTGTGTCTTGACGTCG TCGTGCGGCCTTGTTCCGCCAGCCCCTCGTGTGCATAATGATGGATTCAT TCAGTCGTTCACGATCCCTCCAAGTCCTTCCCTCGAGTATTCACTGTTTC ATCAGTCCATGCATGAGTTATATTCGTTCGTGTGCGTCACGCACCTGCTC ACCCATCTGTTCATCCATCCCCCGATTCATTCACACCCGTGTTTCACTCG GGCACACATCACTCAACACGCATCACTCACCCATCTGTACTCCTTCACAC CCGTGTTATCACTTACCTATCTGTACTCCTTCACACCCGTGTTTTCACTG ATCCATTCATCCATGCTTTACTTACTTACTCACTCACTCATCTGTTTATC CACCCCCACTCATTCACACCCGTGTTTTCACTCATGCATGCCTCACGCAC TCACTCACTCATTTCTTTCCATCCCCTCGTCCATCCGCACCCGTGTTTCA CTCGGGCACACATCAGCACTCACTCATCTGTTCGTCCATCCACCCGCTTA TTCACACCCGTGCTTCACTCGGGCACACATCATTGAACACGCATCACTCA CCCATCTGTACTCCTTCACACCCGTGTTATCATGTACTCCTTCACACCCG TGTTTTCACTCATTCACTCACGCACTCATCCATTCATCCATGCTTTACTC ACTTACTCACTCATCTGTTCATCCACCCCCACTCATTCACACCCGTGTTG TCACTCATGCATGCCTCACGCACTCACTCACTCATTTATTTCCATCCCCC CGTCCATTCGCACCCGTGCTTCACTCGGGCACACATCAGCCACTCACTCA TCTGTTCGTCCATCCACCCGCTTATTCACACCCGTGTTTCACTCACGCAT GCATCACTTACTCCCTCACTCACTCATCTGTTCATCCACCCCCCCACTCC TTCACGCCCGTGTTTTCACTCATCCATCCCCCACTCACTCATTTCTCTCA GATGGCGGGCCTCGGCTACAGCCTGGACTTCACCACCCGGGGGGTGCGCC TCTCCTTCGGCGGCTTCGGCGACAAGATGCCCGACTTCATCGAGAAGGTC GCCGGCGCCGTCGCC
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Coding sequence (CDS) from alignment at S-firma_F_contig10585:3..4217-

>mRNA_S-firma_F_contig10585.794.1 ID=mRNA_S-firma_F_contig10585.794.1|Name=mRNA_S-firma_F_contig10585.794.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=318bp|location=Sequence derived from alignment at S-firma_F_contig10585:3..4217- (Sphaerotrichia firma ET2_F female)
ATGTCCCTCGACGAAAAGCTCAACGAGTACGCGTACGATGCCCAGATGTC
CCTCGACGAAAAGCTCAACGAGTACGCGTACGATGCCCAGATGGCGGGCC
TCGGCTACAGCCTGGACTTCACCACCCGGGGGGTGCGCCTCTCCTTCGGC
GGCTTCGGCGACAAGATGCCCGACTTCATCGAGAAGGTCGCCGGCGCCGT
CGCCATGGCGGGCCTCGGCTACAGCCTGGACTTCACCACCCGGGGGGTGC
GCCTCTCCTTCGGCGGCTTCGGCGACAAGATGCCCGACTTCATCGAGAAG
GTCGCCGGCGCCGTCGCC
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