mRNA_S-firma_F_contig10585.794.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: D7FHU5_ECTSI (Insulysin isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU5_ECTSI) HSP 1 Score: 353 bits (905), Expect = 3.370e-120 Identity = 172/219 (78.54%), Postives = 193/219 (88.13%), Query Frame = 1
Query: 1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
SGP+RL YNE+LV R+LDVLRP PV+YS++TP+V+STAKEF GKADK EKWYGTPYQ +S A + +EWC PP IPAL+LPGPNPF+PRDLSVI PKGR+VKPG++ APAVVLVFPTTAGWKVRHKLDDIFAQPKVV E+VSPVAYESPR VAALKLFE+SLDE+LNEYAYDAQMAGLGYSLDFTTRG+R+SF GF DKMPDFIEKVA AVA
Sbjct: 15 SGPSRLTSYNESLVYRLLDVLRPDPVEYSSATPLVFSTAKEFEGKADKNEKWYGTPYQV----ESLASYEKEWCSPPAIPALKLPGPNPFIPRDLSVINPKGRIVKPGDKIAAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVCNLEVVSPVAYESPRAVAALKLFELSLDERLNEYAYDAQMAGLGYSLDFTTRGLRMSFAGFSDKMPDFIEKVAQAVA 229
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A6H5JJV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV2_9PHAE) HSP 1 Score: 338 bits (866), Expect = 2.830e-108 Identity = 174/242 (71.90%), Postives = 190/242 (78.51%), Query Frame = 1
Query: 1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGT--PYQASPKSDSRAL---------------------F*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
SGP+RL YNE+LV R+LDVLRP PVDYSA+TP+V+STAKEF GKADK E+WYG P K D RA REWC PP IPAL+LPGPNPF+PRDL VI PKGRVVKPGE+ APAVVLVFPTTAGWKVRHKLDDIFAQPKVV Y E+VSPVAYESPR VAALKLFE+SL+E+LNEYAYDAQMAGLGYSLDFTTRG+R+SF GF DKMPDFIEKVA AVA
Sbjct: 213 SGPSRLTSYNESLVYRLLDVLRPDPVDYSAATPLVFSTAKEFEGKADKNEEWYGRNGPTTRPTKHDYRAFGSALKRTSHANFEALVESLASHEREWCSPPEIPALKLPGPNPFIPRDLGVINPKGRVVKPGEKIAAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVCYLEVVSPVAYESPRAVAALKLFELSLEERLNEYAYDAQMAGLGYSLDFTTRGLRMSFSGFSDKMPDFIEKVAQAVA 454
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: D7FWX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX6_ECTSI) HSP 1 Score: 224 bits (572), Expect = 2.080e-64 Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1
Query: 1 SGPARLQLYNETLVRRVLDVLRPSP-VDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
SGP RLQ Y+E+ + +L+ LR P S S P V TAK+F A ++EKW+ P+Q +S + EW PP IP +LPGPNPF+P D+ V+ P+G++ KPGE P VV P WKVRHKLDDIFAQPK F+LVSP A+ESPRT AAL LF+ L+E L EY YDA AGL ++L TRG+ LSF G+GDKMP+FI+KVA AVA
Sbjct: 456 SGPCRLQRYDESFIHTLLNSLRSDPPAGSSLSRPRVTVTAKDFEEAATEREKWFDVPHQV----ESLEAYTEEWKAPPAIPEFKLPGPNPFIPEDVRVVVPEGKLPKPGEAIDPPTVVENLPNDGVWKVRHKLDDIFAQPKARCKFQLVSPAAFESPRTWAALDLFDSCLNEHLTEYTYDALTAGLSFNLSVNTRGIGLSFQGYGDKMPEFIDKVAEAVA 671
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A836CJH9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH9_9STRA) HSP 1 Score: 178 bits (451), Expect = 7.550e-48 Identity = 106/221 (47.96%), Postives = 130/221 (58.82%), Query Frame = 1
Query: 1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKAD--KKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
SGP L ++ LV +L + +TP ++ KA ++E+WYGT YQ + A R W P +PAL LP PNPFVPRDLSV P R +++ AP V + W V ++ DD+F QPK AYFELVS AY S VAALKLF+MSLDE L EY+YDA AGL YSLDFTTRG RL+FGG+ D+MPDFI VA A A
Sbjct: 490 SGPVLLDQPDKQLVASLLAAM--------TNTPRAPPAKQQDFAKAPNLQRERWYGTQYQVERVPAAAA---RAWTAPRTVPALFLPTPNPFVPRDLSVKTPATR-----KRSAAPPPPTVVGDSPAWLVNYRADDVFGQPKAYAYFELVSAGAYASAGAVAALKLFQMSLDEALREYSYDAATAGLSYSLDFTTRGARLAFGGWSDRMPDFIAAVAAATA 694
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A6H5JLX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX7_9PHAE) HSP 1 Score: 158 bits (399), Expect = 5.650e-42 Identity = 86/186 (46.24%), Postives = 107/186 (57.53%), Query Frame = 1
Query: 190 DSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMA------------------------------GLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
+S + +W PP IP +LPGPNPF+P D+ VI P G++ KPGE P VV WKVRHKLDDIFAQPK F+LVSP A+ESPRT AAL LF L+E L EY YDA ++ GL ++L +RG+ LSF G+G+KMP+FI+KVA AVA
Sbjct: 7 ESLEAYTEQWKAPPAIPEFKLPGPNPFIPEDVRVIVPDGKLPKPGEAIDPPTVVENLSNDGVWKVRHKLDDIFAQPKARCKFQLVSPAAFESPRTWAALDLFGSCLNEHLTEYTYDALVSRFITSLALVGRYITGCREKLICVHKRNSYVGLSFNLSVNSRGIGLSFRGYGNKMPEFIDKVAEAVA 192
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A0G4H2H6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2H6_VITBC) HSP 1 Score: 125 bits (315), Expect = 1.390e-29 Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 100 MVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
+V AK+F G DK E+WYGTPY+ + R EW + P L P NPF+P D+S+ + G Q P ++ T W+V +K D F PK F L + SP +L+E+S+++ LNE+AYDA +AGL Y +DF +G++LSFGG+ DK+ DF+E+V+ +A
Sbjct: 589 LVTCIAKDFEGTTDKTEEWYGTPYR---ERLIRETTLEEWAQQKAPPDLTYPPANPFIPSDVSL--KFSQTPDAGRQPLPPEIIRDDGT---WRVFYKGDRKFGTPKAYGLFSLSTNAPLVSPENQVLSRLYELSVNDDLNEFAYDAGLAGLSYGVDFNAKGLQLSFGGYNDKLQDFVERVSRRIA 766
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A3S5XFM2_TIGJA (Insulin-degrading enzyme n=1 Tax=Tigriopus japonicus TaxID=158387 RepID=A0A3S5XFM2_TIGJA) HSP 1 Score: 120 bits (302), Expect = 7.190e-28 Identity = 77/214 (35.98%), Postives = 110/214 (51.40%), Query Frame = 1
Query: 16 LQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGAVA 657
L + LV RVL+ L P S +++F+ A+ EKWYGT Y + P + + W + PV PALRLP PNPF+P D S+ P E+ P V++ T ++V K DD F PK YFEL SP+ Y P ++F L + LNE+AYDA++AGL Y ++ T G+ LS G+ +K +EK+ +A
Sbjct: 494 LSEWKPELVDRVLENLVPEKTQVSI-------ISQKFSDIANDTEKWYGTKYHSEPIPQEKL---KRWTDEPVDPALRLPPPNPFIPTDFSLA--------PREEPNLPHPVIIKDTPL-FRVWFKQDDQFLLPKSCIYFELRSPMVYLDPHHDNMTRIFVRLLQDDLNEFAYDAELAGLNYRINNTKVGLNLSIKGYNEKQSVLLEKLMSRMA 688
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: A0A7S4U7R2_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U7R2_GUITH) HSP 1 Score: 120 bits (300), Expect = 1.350e-27 Identity = 82/220 (37.27%), Postives = 115/220 (52.27%), Query Frame = 1
Query: 1 SGPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADKKEKWYGTPYQASPKSDSRALF*REWCEPPVIPALRLPGPNPFVPRDLSVIKPKGRVVKPGEQAQAPAVVLVFPTTAGWKVRHKLDDIFAQPKVVAYFELVSPV-----AYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVA 645
SGPA + L + +L L P + M+ +KEFA A +E+WYGT Y SR W P+ + +P PNPF+P + + KG +V+ + P +LV +T W++ K D + +PK VAY L+S +PRT A KL SL + L E++YDA +AGL YS DFT RGVRL+FGG+ DK+ DF+ VA
Sbjct: 570 SGPALARDLQLDLAQELLSALTPQ-------SAMLTYASKEFAKDAKMRERWYGTSYYTEEADKSR------WGRLPLA-GVSVPQPNPFIPSNFDI---KGSIVEDLAKPAIPPSLLVDDST--WRLFFKQDRRYGKPKAVAYV-LISQFDSLLGTGTTPRTSALTKLLTASLADALTEFSYDAAVAGLQYSCDFTQRGVRLNFGGYNDKLADFLLSVA 769
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: K8YRP1_NANGC (Insulysin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRP1_NANGC) HSP 1 Score: 116 bits (291), Expect = 2.170e-26 Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 1
Query: 4 GPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADK----KEKWYGTPYQASPKSDSRALF*REWCEPPVI-PALRLPGPNPFVPRDLSVI--KPKGRVVKPGEQAQAPAVVLVFPTTA--------------GWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAG 648
GP L ++E VR L +L P + + +K F +A K KEKWYGT ++ +++ W PP I P L LP PN F+P D S+I +P + + P + L+FP++A G KV HKLD F PKV + L+S Y SP +V +L+ M L ++LNE+AY+A MAGL YS+ T G+ + G+ K+P +EKVAG
Sbjct: 614 GPYALD-WDEQAVRDYLSLLTPERMHLTV-------VSKAFEEEAQKEAWAKEKWYGTLHKLEKLPEAKVAA---WSNPPEIHPMLSLPSPNEFLPTDFSLICEQPAYKSLAPDDPVHPFPPSLLFPSSAQALPASLPASSPERGVKVFHKLDTTFKVPKVQFFAHLLSRQIYSSPPSVVLHRLYNMLLRDELNEFAYEAAMAGLSYSVTTRTTGLSVKVSGYSHKLPVLLEKVAG 838
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Match: W7U2K9_9STRA (Insulin-degrading enzyme n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2K9_9STRA) HSP 1 Score: 115 bits (287), Expect = 6.220e-26 Identity = 82/236 (34.75%), Postives = 119/236 (50.42%), Query Frame = 1
Query: 4 GPARLQLYNETLVRRVLDVLRPSPVDYSASTPMVWSTAKEFAGKADK----KEKWYGTPYQASPKSDSRALF*REWCEPPVI-PALRLPGPNPFVPRDLSVI--KPKGRVVKPGEQAQAPAVVLVFPTTA--------------GWKVRHKLDDIFAQPKVVAYFELVSPVAYESPRTVAALKLFEMSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAG 648
GP L ++E VR L +L P + + +K F +A K KEKWYGT ++ +++ W PP I P L LP PN F+P D S+I +P + + P + L+FP++A G KV HKLD F PKV + L+S Y SP +V +L+ M L ++LNE+AY+A MAGL YS+ T G+ + G+ K+P ++KVAG
Sbjct: 315 GPYALD-WDEQAVRDYLSLLTPERMHLTV-------VSKAFEEEAQKEAWAKEKWYGTLHKLEKLPEAKVAA---WSNPPEIHPMLSLPSPNEFLPTDFSLICEQPAYKSLAPDDPVHPFPPSLLFPSSAQALPASLPASSPERGVKVFHKLDTTFKVPKVQFFAHLLSRQIYSSPPSVVLHRLYNMLLRDELNEFAYEAAMAGLSYSVTTRTTGLSVKVSGYSHKLPVLLKKVAG 539 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10585.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10585.794.1 >prot_S-firma_F_contig10585.794.1 ID=prot_S-firma_F_contig10585.794.1|Name=mRNA_S-firma_F_contig10585.794.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=53bp MSLDEKLNEYAYDAQMAGLGYSLDFTTRGVRLSFGGFGDKMPDFIEKVAGback to top mRNA from alignment at S-firma_F_contig10585:3..4217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10585.794.1 ID=mRNA_S-firma_F_contig10585.794.1|Name=mRNA_S-firma_F_contig10585.794.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4215bp|location=Sequence derived from alignment at S-firma_F_contig10585:3..4217- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10585:3..4217- >mRNA_S-firma_F_contig10585.794.1 ID=mRNA_S-firma_F_contig10585.794.1|Name=mRNA_S-firma_F_contig10585.794.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=318bp|location=Sequence derived from alignment at S-firma_F_contig10585:3..4217- (Sphaerotrichia firma ET2_F female)back to top |