mRNA_S-firma_F_contig10571.781.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10571.781.1
Unique NamemRNA_S-firma_F_contig10571.781.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A2R5GHB4_9STRA (Centrosomal protein of 104 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHB4_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.030e-59
Identity = 118/250 (47.20%), Postives = 161/250 (64.40%), Query Frame = 1
Query:   22 KIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPH-----ATLAPVRPGPGRIGMQGSSPRALC--VPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARL 750
            ++KF+VV+ + EDPE+PA ELN HS +T+GWQ   +  +PQEIG+ F  G   + Q+QILSHQ+KIAT+I+++VG G  Y+S  FRRLG++SLD N RS++ ARELKSV++  QG F+K ++H  H N  N YNQ  V+AINV+G  ++ G G P      A  +  R   GR G   + P A    VP      DLAVDM  DP TA  +REV+  KE+AV +E++  AK LK  E  L+ +G  +ARL
Sbjct:   47 QVKFEVVYCSGEDPEFPASELNVHSPQTQGWQSPPFCAYPQEIGLGFLVGEVDLAQLQILSHQSKIATKIDVYVGRGNSYESCNFRRLGHLSLDSNERSNFAARELKSVYIGKQGSFLKLLIHKCHLNSLNIYNQVGVMAINVLGHAIANGNGHPGRDGYLAAESNQRMSEGRGGSDRAYPTAASRQVPPLQ---DLAVDMQFDPVTAKLLREVHDAKERAVEEEEYELAKQLKEAEGRLKHVGVKLARL 293          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A6U4PS30_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4PS30_HEMAN)

HSP 1 Score: 194 bits (494), Expect = 1.650e-57
Identity = 107/251 (42.63%), Postives = 156/251 (62.15%), Query Frame = 1
Query:   13 LGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG-----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARL 750
            +  K+KF++++ +SEDPE+P+ ELN HS  T GWQ  ++ ++PQE+G +F A   ++ Q+QILSHQ KIAT++ELF+G     D   Y  S F+RLGY+SLD N RS ++ARELKSV VDA G F+K +VH  H N  N Y+Q  +IA+NV+G+      GA     APV       G  G++ R       +   D+  D++ D  TA  IRE++  K++AV+ ED+  AK LK     L+++G  +A+L
Sbjct:    1 MPAKLKFKLIYCSSEDPEFPSSELNAHSPHTVGWQSARFCDYPQELGFQFGANV-RLSQLQILSHQFKIATKLELFIGSTAEGDKPSYHKSKFKRLGYLSLDSNERSSWQARELKSVQVDAYGRFIKILVHKNHINKLNMYSQVGIIAVNVIGDAAPAPPGAHPMLGAPVGGPDAHAGADGAAHRPPGKKDVSPLDDITFDLNFDAATAKQIRELHMAKDRAVKAEDYDAAKRLKDAIDRLKQVGARMAKL 250          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S0X385_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X385_9CHLO)

HSP 1 Score: 194 bits (492), Expect = 2.760e-57
Identity = 106/238 (44.54%), Postives = 149/238 (62.61%), Query Frame = 1
Query:   16 GTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSG-----GGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALK 702
            G+K++F V HAT ED +YPAREL+FH+ +TRGWQC ++++FPQE+ +R    A +I QIQ+LSH+ KIAT+IEL+ G         D +  RRLG++S D N+ S ++ARELKSV V+     ++ VVH  H N  N YNQ  ++A+NV+GEP++      GGG       PVRP P  +                  ADLA+D+ +DP TA  IRE++ LKE+AV  ED+ +AK L+
Sbjct:    7 GSKLRFSVAHATGEDSDYPARELHFHTPQTRGWQCARFSKFPQELVLRLDHPA-RIHQIQLLSHEYKIATKIELYTGLLPPGETSLDRAVMRRLGHLSFDANTASGHQARELKSVHVNVDAVILRVVVHKCHVNKLNIYNQVGIVALNVIGEPIASPQDGQGGGMMQPNAGPVRPRPAGV------------------ADLALDLDVDPVTAVKIREIHQLKEEAVAREDYDEAKRLR 225          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S0MHU1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MHU1_9CRYP)

HSP 1 Score: 194 bits (493), Expect = 3.200e-57
Identity = 112/250 (44.80%), Postives = 157/250 (62.80%), Query Frame = 1
Query:   13 LGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRD-----YDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVAR 747
            + TK++F++VH +SEDPE+PA ELN HS  T GWQ  ++ E+PQE+G +F     ++ Q+QILSHQ K+AT++ELFVG+  +     Y  S F+RLGY+SLD N RS+++ARELKSV +DA G F+K VVH  H N  N Y+QA +IAINV+G+           T+ P           G++PR    P      DL  D++ DP TA  IRE++  KE+AVR ED+  AK LK     L+++G  +A+
Sbjct:    1 MPTKLRFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCEYPQELGFQFGTTV-RLMQLQILSHQFKVATKLELFVGNPVEGEKPSYHKSKFKRLGYLSLDSNERSNWQARELKSVQLDAYGRFIKIVVHKCHINKLNLYSQAGLIAINVIGDA--------SPTVPPNEQSEVLPPAAGAAPRKDISPM----DDLTFDLNFDPTTAKQIRELHLAKERAVRAEDYDAAKRLKDAVERLKQVGARLAK 237          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: L1IUT7_GUITC (UVR domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IUT7_GUITC)

HSP 1 Score: 194 bits (493), Expect = 4.770e-57
Identity = 113/249 (45.38%), Postives = 156/249 (62.65%), Query Frame = 1
Query:   13 LGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHAT-LAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVA 744
            +  K+KF++VH +SEDPE+PA ELN HS  T GWQ  ++ ++PQEIG +FS+  H + Q+Q+LSHQ KIA+++ELFVG    D   Y    F+RLGY+SLD N RS ++ARELKSV +DA G F+K V H  H N  N Y+Q  +IAINV+G+ +   G +P A   AP +P    I        AL         D+  D++ DP TA+ IRE++  KE+AV+ ED+  AK LK     L+++G  VA
Sbjct:    1 MPAKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQEIGFQFSSTVH-LMQLQVLSHQFKIASKLELFVGMPEGDKTTYHKCKFKRLGYLSLDANERSSWQARELKSVQLDAYGKFLKIVAHTCHANKMNIYSQVGIIAINVIGDAV---GNSPAAIPSAPTQP----ITQNRKEISAL--------DDVTFDLNFDPTTAAQIRELHIAKERAVKAEDYDAAKRLKDAIERLKQVGSRVA 233          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: K8Z1Q2_NANGC (UVR domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z1Q2_NANGC)

HSP 1 Score: 191 bits (484), Expect = 4.020e-56
Identity = 108/242 (44.63%), Postives = 152/242 (62.81%), Query Frame = 1
Query:   19 TKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMS-MDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHV 741
            +KI+FQVV+A+ +DPE+PA ELN HS  T GWQ  ++ ++PQE+G+        + ++QILSHQ+KIAT++ELFVGDG +Y  +AF RLGY+SL+ N RS+++ARELKSVFV   G F+K V+H  H N  N +NQ   +AIN++GE      G P  +  P  P P   G  G+    +         DLA ++S  DP+T   +R + A KE AVR E++ +AK LKA E  L+  G  +
Sbjct:    2 SKIRFQVVYASGQDPEHPAEELNVHSPATEGWQSPRFCDYPQELGLFLLDTPCHLSRVQILSHQSKIATKVELFVGDGGNYAEAAFARLGYLSLNSNQRSNFRARELKSVFVSCSGRFLKLVIHRCHVNKFNLFNQVGFVAINLLGE------GGPDPSPEPFLP-PHHAG--GADEEGV--------HDLAYELSPFDPDTTRRLRALLAAKEGAVRAENYDEAKRLKAAEAALREGGQRI 226          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A5A8C9V8_CAFRO (TOG domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9V8_CAFRO)

HSP 1 Score: 201 bits (511), Expect = 1.640e-55
Identity = 123/316 (38.92%), Postives = 167/316 (52.85%), Query Frame = 1
Query:   22 KIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATL-------------------------------------------APVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARLITEXXXXXXXXXXXXXXXXKDEIDALRHTV 840
            K++F+V   + +DPEYPA ELN HS +TRGW   +++EFP E+G++F     +++Q+QILSHQ+KIATRIELFVG G DY S+ +RRLGY+SLD N RS +KARELKSV+VDA+G F+K +VH PH N +N  NQ  ++A+N +G  L      PH  +                                           +    G GR G           P      DLAVDM +D ETA+  R+++A K  AV  EDF  AKA K  E  ++ +GG +A L+ +                K  IDA+R  V
Sbjct:    9 KLRFEVAFVSGQDPEYPASELNVHSPETRGWASPQFSEFPVELGLKFLRAPVRMQQLQILSHQSKIATRIELFVGRGSDYFSADWRRLGYLSLDSNERSGFKARELKSVYVDAKGHFLKMLVHKPHQNGRNLLNQVGIVAVNALGTAL------PHDAVPTSFKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHRSXXXXGYGRAGG----------PPAPGPDDLAVDMGLDRETAALYRDLHAKKLAAVSREDFAAAKAFKEAEDMVRALGGQLAGLLRDKRAAVEAEDYDRAAAVKARIDAIRGEV 308          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S1CBN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBN9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.710e-55
Identity = 84/153 (54.90%), Postives = 115/153 (75.16%), Query Frame = 1
Query:   16 GTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGG 474
            G K+KF+V + TSEDPE+PA  LN H   +RGWQ ++++ FPQE+G++ + GA ++ Q+Q+LSHQ K+AT++ELF+G G  Y  ++F+RLGY++LD N RS Y+ARELKSV+VDA+  F++ VVH PH N  N YNQ   IAINVVG PL  G
Sbjct:   14 GRKLKFRVCYCTSEDPEHPASALNHHGPSSRGWQTNRFSTFPQEVGLQLADGAARLVQLQLLSHQFKVATKVELFLGKGDAYRHASFKRLGYLTLDSNERSGYRARELKSVYVDAEASFLRLVVHKPHTNAHNLYNQVGFIAINVVGAPLPPG 166          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S0EV58_9CRYP (Hypothetical protein (Fragment) n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0EV58_9CRYP)

HSP 1 Score: 197 bits (501), Expect = 2.000e-54
Identity = 112/249 (44.98%), Postives = 156/249 (62.65%), Query Frame = 1
Query:   10 ELGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVA 744
            ++  K+KF++VH +SEDPE+PA ELN HS  T GWQ  ++ ++PQE+G +FS+  H + Q+Q+LSHQ KIA+++ELFVG    D   Y    F+RLGY+SLD N RS ++ARELKSV +DA G F+K V H  H N  N Y+Q  VIAINV+G+ +  G GA   + AP  P    +        AL         D+  D++ DP TA+ IRE++  KE+AV+ ED+  AK LK     L+++G  VA
Sbjct:    6 DMPAKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQELGFQFSSTVH-LMQLQVLSHQFKIASKLELFVGTPEGDKTTYHKCKFKRLGYLSLDSNERSSWQARELKSVQLDAYGRFLKIVAHPCHANKMNIYSQVGVIAINVIGDAV--GAGAAAVSSAPAPP----VTQSRKEISAL--------DDVTFDLNFDPTTAAQIRELHIAKERAVKAEDYDAAKRLKDAIERLKQVGSRVA 239          
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A5A8C7I5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C7I5_CAFRO)

HSP 1 Score: 184 bits (467), Expect = 1.200e-53
Identity = 109/271 (40.22%), Postives = 149/271 (54.98%), Query Frame = 1
Query:   22 KIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATL--------------------------------------------APVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALK 702
            K++F+V   + +DPEYPA ELN HS +TRGW   +++EFP E+G++F     +++Q+QILSHQ+KIATRIELFVG G DY S+ +RRLGY+SLD N RS +KARELKSV+VDA+G F+K +VH PH N +N  NQ  ++A+N +G  L      PH  +                                            +    G GR G           P      DLAVDM +D ETA+  R+++A K  AV  EDF  A+ ++
Sbjct:    9 KLRFEVAFVSGQDPEYPASELNVHSPETRGWASPQFSEFPVELGLKFLRAPVRMQQLQILSHQSKIATRIELFVGRGSDYFSADWRRLGYLSLDSNERSGFKARELKSVYVDAKGHFLKMLVHKPHQNGRNLLNQVGIVAVNALGTAL------PHDAVPTSFKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHRSXXXSGYGRAGG----------PPAPGPDDLAVDMGLDRETAALYRDLHAKKLAAVSREDFAAAQGVQ 263          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5GHB4_9STRA1.030e-5947.20Centrosomal protein of 104 kDa n=1 Tax=Hondaea fer... [more]
A0A6U4PS30_HEMAN1.650e-5742.63Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0X385_9CHLO2.760e-5744.54Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A7S0MHU1_9CRYP3.200e-5744.80Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
L1IUT7_GUITC4.770e-5745.38UVR domain-containing protein n=1 Tax=Guillardia t... [more]
K8Z1Q2_NANGC4.020e-5644.63UVR domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A5A8C9V8_CAFRO1.640e-5538.92TOG domain-containing protein n=2 Tax=Cafeteria ro... [more]
A0A7S1CBN9_9STRA3.710e-5554.90Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0EV58_9CRYP2.000e-5444.98Hypothetical protein (Fragment) n=3 Tax=Geminigera... [more]
A0A5A8C7I5_CAFRO1.200e-5340.22Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10571contigS-firma_F_contig10571:561..1577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog55529.EKX39659
PFAMsAnk_2,TPR_10,TPR_12,UVR
Max annot lvl2759|Eukaryota
KEGG koko:K06316,ko:K16458
KEGG TC2.A.66.3
Evalue7.83e-58
EggNOG OGsKOG4825@1|root,KOG4825@2759|Eukaryota
Descriptionthienylcyclohexylpiperidine binding
COG categoryM
BRITEko00000,ko02000,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size840
Cds size840
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10571.781.1prot_S-firma_F_contig10571.781.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10571 561..1577 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.513017-CDS-S-firma_F_contig10571:560..6061622815593.513017-CDS-S-firma_F_contig10571:560..606Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 561..606 -
1696949440.44077-CDS-S-firma_F_contig10571:560..6061696949440.44077-CDS-S-firma_F_contig10571:560..606Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 561..606 -
1622815593.5247972-CDS-S-firma_F_contig10571:664..11311622815593.5247972-CDS-S-firma_F_contig10571:664..1131Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 665..1131 -
1696949440.45341-CDS-S-firma_F_contig10571:664..11311696949440.45341-CDS-S-firma_F_contig10571:664..1131Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 665..1131 -
1622815593.5355513-CDS-S-firma_F_contig10571:1196..13981622815593.5355513-CDS-S-firma_F_contig10571:1196..1398Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 1197..1398 -
1696949440.4693356-CDS-S-firma_F_contig10571:1196..13981696949440.4693356-CDS-S-firma_F_contig10571:1196..1398Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 1197..1398 -
1622815593.5495405-CDS-S-firma_F_contig10571:1452..15771622815593.5495405-CDS-S-firma_F_contig10571:1452..1577Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 1453..1577 -
1696949440.480853-CDS-S-firma_F_contig10571:1452..15771696949440.480853-CDS-S-firma_F_contig10571:1452..1577Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10571 1453..1577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10571.781.1

>prot_S-firma_F_contig10571.781.1 ID=prot_S-firma_F_contig10571.781.1|Name=mRNA_S-firma_F_contig10571.781.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=280bp
MSSELGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEI
GIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISL
DDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINV
VGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVD
MSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARL
ITEKEQAVLDEDYDRAKILKDEIDALRHTV
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mRNA from alignment at S-firma_F_contig10571:561..1577-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10571.781.1 ID=mRNA_S-firma_F_contig10571.781.1|Name=mRNA_S-firma_F_contig10571.781.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1017bp|location=Sequence derived from alignment at S-firma_F_contig10571:561..1577- (Sphaerotrichia firma ET2_F female)
ATGTCAAGTGAGCTTGGCACCAAGATCAAGTTCCAGGTGGTGCACGCCAC CAGCGAAGACCCAGAGTACCCCGCCCGGGAGCTCAACTTTCACTCCCGGA AAACCCGTGGCTGGCAGTGCGACAAGTACGCCCCCCCCCTGGAACCTCCA TTCCCCCACTAACTCCTTCCCGTGTGCAGGTGGGCAGAGTTCCCCCAGGA AATCGGTATCCGGTTCTCTGCTGGTGCGCACCAAATCAAGCAAATCCAAA TCCTGTCCCACCAAACCAAGATTGCGACCCGGATTGAGCTGTTTGTGGGA GACGGCCGGGACTACGACTCGTCGGCGTTCAGGCGGCTGGGGTACATTTC CCTGGACGACAACTCCCGCAGTGACTACAAGGTTTGTGTGCGTGTGTTTG CGTGTGCGCGCGTGTGTGTGTGTGTGTGTGACCCCCGCCCTCCCAGGCCC GGGAGCTCAAGTCCGTGTTTGTGGATGCCCAGGGCTGCTTCATGAAGTTC GTGGTGCACGTCCCCCACCCCAACCCCCAAAACTTTTACAACCAGGCCTG CGTGATTGCCATCAACGTGGTGGGGGAGCCGCTGTCCGGCGGCGGCGGCG CCCCCCACGCCACCCTGGCGCCTGTCCGCCCCGGCCCCGGCCGCATCGGG ATGCAGGGTTCGTCCCCACGAGCGCTTTGTGTGCCCACCTGTAACACCCG CGCAGACCTGGCGGTGGACATGTCCATGGACCCGGAGACGGCATCCACCA TCCGTGAGGTGAACGCCCTGAAGGAGCAAGCCGTCCGTGATGAGGACTTT TTGAAGGCAAAGGCCCTGAAGGCGGTGGAAGTGGAGCTGCAGCGCATGGG GGGCCACGTGGCTCGCCTCATTACTGAAAAGGAGCAAGCCGTGCTGGACG AGGACTACGACCGGTGGGTGGCTGTGTGTCCAGGCCAGGTGGTGGGCGAG TCACGACCCACCCCACCCCAGCGCCAAAATCCTGAAGGACGAAATTGACG CCCTACGCCACACCGTG
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Coding sequence (CDS) from alignment at S-firma_F_contig10571:561..1577-

>mRNA_S-firma_F_contig10571.781.1 ID=mRNA_S-firma_F_contig10571.781.1|Name=mRNA_S-firma_F_contig10571.781.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1680bp|location=Sequence derived from alignment at S-firma_F_contig10571:561..1577- (Sphaerotrichia firma ET2_F female)
ATGTCAAGTGAGCTTGGCACCAAGATCAAGTTCCAGGTGGTGCACGCCAC
CAGCGAAGACCCAGAGTACCCCGCCCGGGAGCTCAACTTTCACTCCCGGA
AAACCCGTGGCTGGCAGTGCGACAAATGTCAAGTGAGCTTGGCACCAAGA
TCAAGTTCCAGGTGGTGCACGCCACCAGCGAAGACCCAGAGTACCCCGCC
CGGGAGCTCAACTTTCACTCCCGGAAAACCCGTGGCTGGCAGTGCGACAA
GTGGGCAGAGTTCCCCCAGGAAATCGGTATCCGGTTCTCTGCTGGTGCGC
ACCAAATCAAGCAAATCCAAATCCTGTCCCACCAAACCAAGATTGCGACC
CGGATTGAGCTGTTTGTGGGAGACGGCCGGGACTACGACTCGTCGGCGTT
CAGGCGGCTGGGGTACATTTCCCTGGACGACAACTCCCGCAGTGACTACA
AGGTGGGCAGAGTTCCCCCAGGAAATCGGTATCCGGTTCTCTGCTGGTGC
GCACCAAATCAAGCAAATCCAAATCCTGTCCCACCAAACCAAGATTGCGA
CCCGGATTGAGCTGTTTGTGGGAGACGGCCGGGACTACGACTCGTCGGCG
TTCAGGCGGCTGGGGTACATTTCCCTGGACGACAACTCCCGCAGTGACTA
CAAGGCCCGGGAGCTCAAGTCCGTGTTTGTGGATGCCCAGGGCTGCTTCA
TGAAGTTCGTGGTGCACGTCCCCCACCCCAACCCCCAAAACTTTTACAAC
CAGGCCTGCGTGATTGCCATCAACGTGGTGGGGGAGCCGCTGTCCGGCGG
CGGCGGCGCCCCCCACGCCACCCTGGCGCCTGTCCGCCCCGGCCCCGGCC
GCATCGGGATGCAGGGTTCGTCCCCACGAGCGCTTTGTGTGCCCACCTGT
AACACCCGCGCAGACCTGGCGGTGGACATGTCCATGGACCCGGAGACGGC
ATCCACCATCCGTGAGGTGAACGCCCTGAAGGAGCAAGCCGTCCGTGATG
AGGACTTTTTGAAGGCAAAGGCCCTGAAGGCGGTGGAAGTGGAGCTGCAG
CGCATGGGGGGCCACGTGGCTCGCCTCATTACTGAAAAGGAGCAAGCCGT
GCTGGACGAGGACTACGACCGGCCCGGGAGCTCAAGTCCGTGTTTGTGGA
TGCCCAGGGCTGCTTCATGAAGTTCGTGGTGCACGTCCCCCACCCCAACC
CCCAAAACTTTTACAACCAGGCCTGCGTGATTGCCATCAACGTGGTGGGG
GAGCCGCTGTCCGGCGGCGGCGGCGCCCCCCACGCCACCCTGGCGCCTGT
CCGCCCCGGCCCCGGCCGCATCGGGATGCAGGGTTCGTCCCCACGAGCGC
TTTGTGTGCCCACCTGTAACACCCGCGCAGACCTGGCGGTGGACATGTCC
ATGGACCCGGAGACGGCATCCACCATCCGTGAGGTGAACGCCCTGAAGGA
GCAAGCCGTCCGTGATGAGGACTTTTTGAAGGCAAAGGCCCTGAAGGCGG
TGGAAGTGGAGCTGCAGCGCATGGGGGGCCACGTGGCTCGCCTCATTACT
GAAAAGGAGCAAGCCGTGCTGGACGAGGACTACGACCGCGCCAAAATCCT
GAAGGACGAAATTGACGCCCTACGCCACACCGTGCGCCAAAATCCTGAAG
GACGAAATTGACGCCCTACGCCACACCGTG
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