mRNA_S-firma_F_contig10571.781.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A2R5GHB4_9STRA (Centrosomal protein of 104 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHB4_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.030e-59 Identity = 118/250 (47.20%), Postives = 161/250 (64.40%), Query Frame = 1
Query: 22 KIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPH-----ATLAPVRPGPGRIGMQGSSPRALC--VPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARL 750
++KF+VV+ + EDPE+PA ELN HS +T+GWQ + +PQEIG+ F G + Q+QILSHQ+KIAT+I+++VG G Y+S FRRLG++SLD N RS++ ARELKSV++ QG F+K ++H H N N YNQ V+AINV+G ++ G G P A + R GR G + P A VP DLAVDM DP TA +REV+ KE+AV +E++ AK LK E L+ +G +ARL
Sbjct: 47 QVKFEVVYCSGEDPEFPASELNVHSPQTQGWQSPPFCAYPQEIGLGFLVGEVDLAQLQILSHQSKIATKIDVYVGRGNSYESCNFRRLGHLSLDSNERSNFAARELKSVYIGKQGSFLKLLIHKCHLNSLNIYNQVGVMAINVLGHAIANGNGHPGRDGYLAAESNQRMSEGRGGSDRAYPTAASRQVPPLQ---DLAVDMQFDPVTAKLLREVHDAKERAVEEEEYELAKQLKEAEGRLKHVGVKLARL 293
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A6U4PS30_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4PS30_HEMAN) HSP 1 Score: 194 bits (494), Expect = 1.650e-57 Identity = 107/251 (42.63%), Postives = 156/251 (62.15%), Query Frame = 1
Query: 13 LGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG-----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARL 750
+ K+KF++++ +SEDPE+P+ ELN HS T GWQ ++ ++PQE+G +F A ++ Q+QILSHQ KIAT++ELF+G D Y S F+RLGY+SLD N RS ++ARELKSV VDA G F+K +VH H N N Y+Q +IA+NV+G+ GA APV G G++ R + D+ D++ D TA IRE++ K++AV+ ED+ AK LK L+++G +A+L
Sbjct: 1 MPAKLKFKLIYCSSEDPEFPSSELNAHSPHTVGWQSARFCDYPQELGFQFGANV-RLSQLQILSHQFKIATKLELFIGSTAEGDKPSYHKSKFKRLGYLSLDSNERSSWQARELKSVQVDAYGRFIKILVHKNHINKLNMYSQVGIIAVNVIGDAAPAPPGAHPMLGAPVGGPDAHAGADGAAHRPPGKKDVSPLDDITFDLNFDAATAKQIRELHMAKDRAVKAEDYDAAKRLKDAIDRLKQVGARMAKL 250
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S0X385_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X385_9CHLO) HSP 1 Score: 194 bits (492), Expect = 2.760e-57 Identity = 106/238 (44.54%), Postives = 149/238 (62.61%), Query Frame = 1
Query: 16 GTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSG-----GGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALK 702
G+K++F V HAT ED +YPAREL+FH+ +TRGWQC ++++FPQE+ +R A +I QIQ+LSH+ KIAT+IEL+ G D + RRLG++S D N+ S ++ARELKSV V+ ++ VVH H N N YNQ ++A+NV+GEP++ GGG PVRP P + ADLA+D+ +DP TA IRE++ LKE+AV ED+ +AK L+
Sbjct: 7 GSKLRFSVAHATGEDSDYPARELHFHTPQTRGWQCARFSKFPQELVLRLDHPA-RIHQIQLLSHEYKIATKIELYTGLLPPGETSLDRAVMRRLGHLSFDANTASGHQARELKSVHVNVDAVILRVVVHKCHVNKLNIYNQVGIVALNVIGEPIASPQDGQGGGMMQPNAGPVRPRPAGV------------------ADLALDLDVDPVTAVKIREIHQLKEEAVAREDYDEAKRLR 225
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S0MHU1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MHU1_9CRYP) HSP 1 Score: 194 bits (493), Expect = 3.200e-57 Identity = 112/250 (44.80%), Postives = 157/250 (62.80%), Query Frame = 1
Query: 13 LGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRD-----YDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVAR 747
+ TK++F++VH +SEDPE+PA ELN HS T GWQ ++ E+PQE+G +F ++ Q+QILSHQ K+AT++ELFVG+ + Y S F+RLGY+SLD N RS+++ARELKSV +DA G F+K VVH H N N Y+QA +IAINV+G+ T+ P G++PR P DL D++ DP TA IRE++ KE+AVR ED+ AK LK L+++G +A+
Sbjct: 1 MPTKLRFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCEYPQELGFQFGTTV-RLMQLQILSHQFKVATKLELFVGNPVEGEKPSYHKSKFKRLGYLSLDSNERSNWQARELKSVQLDAYGRFIKIVVHKCHINKLNLYSQAGLIAINVIGDA--------SPTVPPNEQSEVLPPAAGAAPRKDISPM----DDLTFDLNFDPTTAKQIRELHLAKERAVRAEDYDAAKRLKDAVERLKQVGARLAK 237
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: L1IUT7_GUITC (UVR domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IUT7_GUITC) HSP 1 Score: 194 bits (493), Expect = 4.770e-57 Identity = 113/249 (45.38%), Postives = 156/249 (62.65%), Query Frame = 1
Query: 13 LGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHAT-LAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVA 744
+ K+KF++VH +SEDPE+PA ELN HS T GWQ ++ ++PQEIG +FS+ H + Q+Q+LSHQ KIA+++ELFVG D Y F+RLGY+SLD N RS ++ARELKSV +DA G F+K V H H N N Y+Q +IAINV+G+ + G +P A AP +P I AL D+ D++ DP TA+ IRE++ KE+AV+ ED+ AK LK L+++G VA
Sbjct: 1 MPAKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQEIGFQFSSTVH-LMQLQVLSHQFKIASKLELFVGMPEGDKTTYHKCKFKRLGYLSLDANERSSWQARELKSVQLDAYGKFLKIVAHTCHANKMNIYSQVGIIAINVIGDAV---GNSPAAIPSAPTQP----ITQNRKEISAL--------DDVTFDLNFDPTTAAQIRELHIAKERAVKAEDYDAAKRLKDAIERLKQVGSRVA 233
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: K8Z1Q2_NANGC (UVR domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z1Q2_NANGC) HSP 1 Score: 191 bits (484), Expect = 4.020e-56 Identity = 108/242 (44.63%), Postives = 152/242 (62.81%), Query Frame = 1
Query: 19 TKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMS-MDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHV 741
+KI+FQVV+A+ +DPE+PA ELN HS T GWQ ++ ++PQE+G+ + ++QILSHQ+KIAT++ELFVGDG +Y +AF RLGY+SL+ N RS+++ARELKSVFV G F+K V+H H N N +NQ +AIN++GE G P + P P P G G+ + DLA ++S DP+T +R + A KE AVR E++ +AK LKA E L+ G +
Sbjct: 2 SKIRFQVVYASGQDPEHPAEELNVHSPATEGWQSPRFCDYPQELGLFLLDTPCHLSRVQILSHQSKIATKVELFVGDGGNYAEAAFARLGYLSLNSNQRSNFRARELKSVFVSCSGRFLKLVIHRCHVNKFNLFNQVGFVAINLLGE------GGPDPSPEPFLP-PHHAG--GADEEGV--------HDLAYELSPFDPDTTRRLRALLAAKEGAVRAENYDEAKRLKAAEAALREGGQRI 226
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A5A8C9V8_CAFRO (TOG domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9V8_CAFRO) HSP 1 Score: 201 bits (511), Expect = 1.640e-55 Identity = 123/316 (38.92%), Postives = 167/316 (52.85%), Query Frame = 1
Query: 22 KIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATL-------------------------------------------APVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVARLITEXXXXXXXXXXXXXXXXKDEIDALRHTV 840
K++F+V + +DPEYPA ELN HS +TRGW +++EFP E+G++F +++Q+QILSHQ+KIATRIELFVG G DY S+ +RRLGY+SLD N RS +KARELKSV+VDA+G F+K +VH PH N +N NQ ++A+N +G L PH + + G GR G P DLAVDM +D ETA+ R+++A K AV EDF AKA K E ++ +GG +A L+ + K IDA+R V
Sbjct: 9 KLRFEVAFVSGQDPEYPASELNVHSPETRGWASPQFSEFPVELGLKFLRAPVRMQQLQILSHQSKIATRIELFVGRGSDYFSADWRRLGYLSLDSNERSGFKARELKSVYVDAKGHFLKMLVHKPHQNGRNLLNQVGIVAVNALGTAL------PHDAVPTSFKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHRSXXXXGYGRAGG----------PPAPGPDDLAVDMGLDRETAALYRDLHAKKLAAVSREDFAAAKAFKEAEDMVRALGGQLAGLLRDKRAAVEAEDYDRAAAVKARIDAIRGEV 308
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S1CBN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBN9_9STRA) HSP 1 Score: 184 bits (468), Expect = 3.710e-55 Identity = 84/153 (54.90%), Postives = 115/153 (75.16%), Query Frame = 1
Query: 16 GTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGG 474
G K+KF+V + TSEDPE+PA LN H +RGWQ ++++ FPQE+G++ + GA ++ Q+Q+LSHQ K+AT++ELF+G G Y ++F+RLGY++LD N RS Y+ARELKSV+VDA+ F++ VVH PH N N YNQ IAINVVG PL G
Sbjct: 14 GRKLKFRVCYCTSEDPEHPASALNHHGPSSRGWQTNRFSTFPQEVGLQLADGAARLVQLQLLSHQFKVATKVELFLGKGDAYRHASFKRLGYLTLDSNERSGYRARELKSVYVDAEASFLRLVVHKPHTNAHNLYNQVGFIAINVVGAPLPPG 166
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A7S0EV58_9CRYP (Hypothetical protein (Fragment) n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0EV58_9CRYP) HSP 1 Score: 197 bits (501), Expect = 2.000e-54 Identity = 112/249 (44.98%), Postives = 156/249 (62.65%), Query Frame = 1
Query: 10 ELGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVG----DGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATLAPVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALKAVEVELQRMGGHVA 744
++ K+KF++VH +SEDPE+PA ELN HS T GWQ ++ ++PQE+G +FS+ H + Q+Q+LSHQ KIA+++ELFVG D Y F+RLGY+SLD N RS ++ARELKSV +DA G F+K V H H N N Y+Q VIAINV+G+ + G GA + AP P + AL D+ D++ DP TA+ IRE++ KE+AV+ ED+ AK LK L+++G VA
Sbjct: 6 DMPAKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQELGFQFSSTVH-LMQLQVLSHQFKIASKLELFVGTPEGDKTTYHKCKFKRLGYLSLDSNERSSWQARELKSVQLDAYGRFLKIVAHPCHANKMNIYSQVGVIAINVIGDAV--GAGAAAVSSAPAPP----VTQSRKEISAL--------DDVTFDLNFDPTTAAQIRELHIAKERAVKAEDYDAAKRLKDAIERLKQVGSRVA 239
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Match: A0A5A8C7I5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C7I5_CAFRO) HSP 1 Score: 184 bits (467), Expect = 1.200e-53 Identity = 109/271 (40.22%), Postives = 149/271 (54.98%), Query Frame = 1
Query: 22 KIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIGIRFSAGAHQIKQIQILSHQTKIATRIELFVGDGRDYDSSAFRRLGYISLDDNSRSDYKARELKSVFVDAQGCFMKFVVHVPHPNPQNFYNQACVIAINVVGEPLSGGGGAPHATL--------------------------------------------APVRPGPGRIGMQGSSPRALCVPTCNTRADLAVDMSMDPETASTIREVNALKEQAVRDEDFLKAKALK 702
K++F+V + +DPEYPA ELN HS +TRGW +++EFP E+G++F +++Q+QILSHQ+KIATRIELFVG G DY S+ +RRLGY+SLD N RS +KARELKSV+VDA+G F+K +VH PH N +N NQ ++A+N +G L PH + + G GR G P DLAVDM +D ETA+ R+++A K AV EDF A+ ++
Sbjct: 9 KLRFEVAFVSGQDPEYPASELNVHSPETRGWASPQFSEFPVELGLKFLRAPVRMQQLQILSHQSKIATRIELFVGRGSDYFSADWRRLGYLSLDSNERSGFKARELKSVYVDAKGHFLKMLVHKPHQNGRNLLNQVGIVAVNALGTAL------PHDAVPTSFKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHRSXXXSGYGRAGG----------PPAPGPDDLAVDMGLDRETAALYRDLHAKKLAAVSREDFAAAQGVQ 263 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10571.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10571.781.1 >prot_S-firma_F_contig10571.781.1 ID=prot_S-firma_F_contig10571.781.1|Name=mRNA_S-firma_F_contig10571.781.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=280bp MSSELGTKIKFQVVHATSEDPEYPARELNFHSRKTRGWQCDKWAEFPQEIback to top mRNA from alignment at S-firma_F_contig10571:561..1577- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10571.781.1 ID=mRNA_S-firma_F_contig10571.781.1|Name=mRNA_S-firma_F_contig10571.781.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1017bp|location=Sequence derived from alignment at S-firma_F_contig10571:561..1577- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10571:561..1577- >mRNA_S-firma_F_contig10571.781.1 ID=mRNA_S-firma_F_contig10571.781.1|Name=mRNA_S-firma_F_contig10571.781.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1680bp|location=Sequence derived from alignment at S-firma_F_contig10571:561..1577- (Sphaerotrichia firma ET2_F female)back to top |