mRNA_S-firma_F_contig105.701.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: UPI000CED48D2 (probable protein phosphatase 2C 8 isoform X1 n=4 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED48D2) HSP 1 Score: 67.8 bits (164), Expect = 5.640e-10 Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 1
Query: 277 VDVMKQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMF----------HNDQDTLGESFTAKTEFHTVSNESEKKRVEAAGGIFTANGRLFGKLQ 585
+ V K+A+LDGFR T E+ A G G+TA+ + G+ V +AN+GD+ A+ HN T H E+ R++ AGGI +ANGRL G+L+
Sbjct: 145 IKVAKRAILDGFRKTDESLLQESAAGGWQDGATAVCVWIVGKTVFVANIGDAKAVVARSSTSEGSQHNPDGATTMKAIVLTREHKAIYPQERARIQKAGGIVSANGRLQGRLE 257
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: A0A0J8BC67_BETVV (PPM-type phosphatase domain-containing protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BC67_BETVV) HSP 1 Score: 61.6 bits (148), Expect = 7.760e-8 Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 1
Query: 259 GLDDLLVDVM--KQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFHNDQDTLGESFT---------AKTEFHTVSNESEKKRVEAAGGIFTANGRLFGKLQ 585
GL L+DV K+A+L+GFR+T EA A G G+TA+ + G+ V +AN+GD+ A+ T+ ++ T H E+ R++ AGG + GRL G+L+
Sbjct: 132 GLPRELLDVKAAKKAILEGFRTTDEALLVESAAGGWQDGATAVCVWILGQTVFVANIGDAKAVVARSNSTIDQNDADDFSPLRAIVLTREHKAIYPQERARIQKAGGSVSTTGRLQGRLE 251
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: UPI000B789632 (probable protein phosphatase 2C 8 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B789632) HSP 1 Score: 61.6 bits (148), Expect = 7.910e-8 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 259 GLDDLLVDVM--KQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMF----HNDQDTLGESFTAK----TEFHTVSNESEKKRVEAAGGIFTANGRLFGKLQ 585
GL L+DV K+A+LDGFR+T EA A G G+TA+ V G+ V +AN+GD+ A+ DQ+ S + T H E+ R++ AGG + GRL G+L+
Sbjct: 140 GLSRELLDVKATKKAILDGFRTTDEALLLDSAAGGWQDGATAVCVWVLGQTVFVANIGDAKAVVARSHSGDQNNSNGSSPLRAIVLTREHKAIYPQERARIQKAGGSVSTTGRLQGRLE 258
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: A0A5C7IHM1_9ROSI (Protein-serine/threonine phosphatase n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7IHM1_9ROSI) HSP 1 Score: 61.6 bits (148), Expect = 9.720e-8 Identity = 57/188 (30.32%), Postives = 89/188 (47.34%), Query Frame = 1
Query: 37 LYGAFDGHGGSSCANFVSRNLPQGVKNSPAWAHLAVRDRDNTTTSDHREDAEEKATT----RPENQRVALGGGARGGGGLDDLLVDVMKQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFHNDQDTLGESFTAKTEFHTVSNESEKKRVEAAGG-IFTANG-RLFGKL 582
++G +DGHGGS AN+ S + + + D + +T + R++ EK T + +++ +GG A G DD D +T EA A GSTA+VA+VC H+++AN GDS A+ ++ + S H + E E R+EA+GG + NG R+FG L
Sbjct: 258 IFGVYDGHGGSQVANYCSERIHFALAEE---IEIIKNDLADGSTKESRQEQWEKTFTSCFLKVDDE---IGGNAGRSVGSDD----------EDASEATFEAVAPETV------GSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSID-----HKPNREDEYARIEASGGKVIQWNGHRVFGVL 418
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: A0A0K9PC33_ZOSMR (Protein-serine/threonine phosphatase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PC33_ZOSMR) HSP 1 Score: 60.1 bits (144), Expect = 2.100e-7 Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 289 KQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFHNDQDTLGESFTAKTEFHTVSNESEKKRVEAAGGI 549
K A++D +R T E KD+GST+ AI+ GR +++AN+GDS A+ D + + A T H + E++R+EAAGG
Sbjct: 95 KSAIVDAYRHTDSELLKIECNQSKDAGSTSSTAILMGRRLLVANVGDSRAVISRDGNAI-----AVTRDHKPNQSDERRRIEAAGGF 176
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: UPI000B8B7D5E (probable protein phosphatase 2C 8 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B7D5E) HSP 1 Score: 57.8 bits (138), Expect = 2.980e-7 Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 1
Query: 277 VDVMKQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFH-----NDQDTLGESFTAK----TEFHTVSNESEKKRVEAAGGIFTANGRLFGKL 582
V K+A+LDGFR+T EA A G G+TA+ V G+ V +AN+GD+ A+ +DQ+ K T H E+ R++ AGG + GRL G+L
Sbjct: 20 VKAAKKAILDGFRTTDEALLLDSAAGGWHDGATAVCLWVLGQTVFVANIGDAKAVVARFTSTSDQNDSNGFIPLKAIVLTREHKAIYPQERARIQKAGGSVSTTGRLQGRL 130
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: UPI0008F9E421 (protein phosphatase 1L-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9E421) HSP 1 Score: 59.3 bits (142), Expect = 5.370e-7 Identity = 55/172 (31.98%), Postives = 82/172 (47.67%), Query Frame = 1
Query: 37 LYGAFDGHGGSSCANFVSRNLPQGVKNSPAWAHLAVRDRDNTTTSDHREDAEEKATTRPENQ-RVALGGGARGGGGLDDLLVDVMKQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDS-GAMFHNDQDTLGESFTAKTEFHTVSNESEKKRVEAAGG 546
Y FDGH AN+ +L +KN A + R N ++S + + + + R + G + G+D K+ L D F ST +A G DSG+TAIVA++ G +++AN+GDS G M +D + SF K E +E EK+R+E AGG
Sbjct: 93 FYAVFDGHVSEYAANYAREHL---IKNIVASYKKQIDLRKNFSSSQASKRYKHQGSQRTSRTLKSTKSFGFQTNEGID------YKKLLNDVFLSTDKALCEELIALGTDSGTTAIVAMIQGTRLIVANVGDSRGVMCDSDGFVVPLSFDHKPE-----SEDEKRRIEEAGG 250
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: A0A5B6ZL25_DAVIN (Protein-serine/threonine phosphatase n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZL25_DAVIN) HSP 1 Score: 59.3 bits (142), Expect = 5.600e-7 Identity = 57/192 (29.69%), Postives = 89/192 (46.35%), Query Frame = 1
Query: 37 LYGAFDGHGGSSCANFVSRNLPQGVKNSPAWAHLAVRD-----RDNTTTSDHREDAE---EKATTRPENQRVALGGGARGGGGLDDLLVDVMKQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFHNDQDTLGESFTAKTEFHTVSNESEKKRVEAAGG-IFTANG-RLFGKL 582
+G +DGHGGS AN+ + HLA+ + RDN RE + EKA T R L +DD + + + + G + + E + + +GSTA+VA++C H+++AN GDS A+ ++ + A + H + E E R+EA+GG I NG R+FG L
Sbjct: 269 FFGVYDGHGGSQVANYCRDRI-----------HLALEEELNIIRDNLVEGSVRETWQVEWEKAFT-----RCFLK--------VDDEVGGTVSKGIAGGNADASNS--SYEPIAPETAGSTAVVALICSSHIIVANCGDSRAVLFRGKEPM-----ALSSDHKPNREDEYARIEASGGKIIQWNGHRVFGVL 429
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: A0A0K9QY57_SPIOL (PPM-type phosphatase domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QY57_SPIOL) HSP 1 Score: 58.5 bits (140), Expect = 9.160e-7 Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 259 GLDDLLVDVM--KQALLDGFRSTQEAFAAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFH-----NDQDTLGESFTAK----TEFHTVSNESEKKRVEAAGGIFTANGRLFGKL 582
GL L+DV K+A+LDGFR+T EA A G G+TA+ V G+ V +AN+GD+ A+ +DQ+ K T H E+ R++ AGG + GRL G+L
Sbjct: 140 GLPRELLDVKAAKKAILDGFRTTDEALLLDSAAGGWHDGATAVCLWVLGQTVFVANIGDAKAVVARFTSTSDQNDSNGFIPLKAIVLTREHKAIYPQERARIQKAGGSVSTTGRLQGRL 258
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Match: A0A811PC72_9POAL (Protein-serine/threonine phosphatase n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811PC72_9POAL) HSP 1 Score: 58.5 bits (140), Expect = 9.570e-7 Identity = 50/185 (27.03%), Postives = 76/185 (41.08%), Query Frame = 1
Query: 37 LYGAFDGHGGSSCANFVSRNLPQGVKNSPAWAHLAVRDRDNTTTSDHREDAEEKATTRPENQRVALGGGARGGGGLDDLLVDVMKQALLDGFRSTQEAF---------------AAREARSGKDSGSTAIVAIVCGRHVVIANLGDSGAMFHNDQDTLGESFTAKTEFHTVSNESEKKRVEAAGG 546
L+G +DGHGGS AN+ + H+ +R+ A +R R G G GG + ++ ++A + F+ + A RE + D GSTA+VA+VC HV++AN GDS + ++ + S H E E R+EAAGG
Sbjct: 97 LFGVYDGHGGSEVANYCGDRI-----------HVVLRE----------------ALSRAAGARGLSGSGELGG------IQELWEKAFCECFQRVDDEVSGEASRFMFADGVSEARREPVAADDVGSTAVVALVCSSHVIVANCGDSRVVLCRGKEPMALSVD-----HKPDREDEHARIEAAGG 243 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig105.701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig105.701.1 >prot_S-firma_F_contig105.701.1 ID=prot_S-firma_F_contig105.701.1|Name=mRNA_S-firma_F_contig105.701.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=195bp MACVSGVVGKVGLYGAFDGHGGSSCANFVSRNLPQGVKNSPAWAHLAVRDback to top mRNA from alignment at S-firma_F_contig105:40683..41755- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig105.701.1 ID=mRNA_S-firma_F_contig105.701.1|Name=mRNA_S-firma_F_contig105.701.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1073bp|location=Sequence derived from alignment at S-firma_F_contig105:40683..41755- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig105:40683..41755- >mRNA_S-firma_F_contig105.701.1 ID=mRNA_S-firma_F_contig105.701.1|Name=mRNA_S-firma_F_contig105.701.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1170bp|location=Sequence derived from alignment at S-firma_F_contig105:40683..41755- (Sphaerotrichia firma ET2_F female)back to top |