mRNA_S-firma_F_contig105.694.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A6H5J8Z2_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8Z2_9PHAE) HSP 1 Score: 333 bits (855), Expect = 8.300e-104 Identity = 160/292 (54.79%), Postives = 208/292 (71.23%), Query Frame = 3
Query: 78 FDESVAREIVQLTEAAYCSAELAGWNCTVCQSFPGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPA--------YIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLG-------AVPFAPVYIFGAPRVGNEVFAKFSVSHGVPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDSGEDVTCSDQFWVSF 908
+DE +A IV+LTEAAYC+ +LA W+C CQ FPGM NV+V+ G+ RNVRGFVGVD+ ++ +++P ++R +G + + +PRIV+TFSGTDP S+KNWIDDLEA + + Y G C C+VHRGFLAAYD+V+DQVR A+ +H+Q+NP +ILITGHSLG ALA LCFLDL++ G +V FAP+Y+FG+PRVGNE FA + GV IFR+VH+RDPVPHLP E+WGY HPPTEVF+ +Q+SY VC+ SGED TCS+QFW F
Sbjct: 52 YDEGLASVIVRLTEAAYCTPQLASWSCKACQHFPGMRNVTVINGEKRNVRGFVGVDIGDAEASNRYTSTPRGPGPDDRRHLRAAEGD---DKGAGGAARSGKPRIVITFSGTDPSSVKNWIDDLEATTVPNTYGGL-CEQCQVHRGFLAAYDLVKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGPNSSVSFAPLYLFGSPRVGNEAFATLTTRPGVSIFRLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNKSGEDDTCSNQFWAIF 339
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A7S2XH34_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XH34_9EUKA) HSP 1 Score: 171 bits (434), Expect = 1.090e-43 Identity = 110/289 (38.06%), Postives = 150/289 (51.90%), Query Frame = 3
Query: 75 AFDESVAREIVQLTEAAYCSAELA----GWNCTVCQSFPGMTNVSVLQGQ---SRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHA-YAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAK-FSVSHGV--PIFRVVHNRDPVPHLPFES----WGYRHPPTEVFFDAEQTSY--VVCDDSGEDVTCSD 890
A++E+ ++ +V + AAYC+ L W+C VC+ FP + N S + + N +GFV D + IVV+FSGTDP ++NWIDDL+ ++ Y GC CKV RGF Y VQ VR +VA + + +P A + ITGHSLGGALA +DL+L + VY FG PRVGN+ FA+ FS G P +RV H DPVPHLP ++ G+ H PTEV++ + + VVCD SGED +CSD
Sbjct: 67 AYNETRSKRMVAMCGAAYCAGTLGHGVGNWDCDVCKQFPDV-NASEFDDKGVLATNGKGFVAFDPHDGKYGS--------------------------------IVVSFSGTDPLQIQNWIDDLDYFAMTPTDYVAAGCSGCKVDRGFYYTYQAVQKHVRESVANYKKSHPKAALWITGHSLGGALAVHAAVDLRLIGNDI--TGVYTFGQPRVGNKAFAQWFSEGLGSSRPHYRVTHRFDPVPHLPMDNKGPIGGFFHVPTEVYYPKQHSDEGAVVCDGSGEDPSCSD 320
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A4D9D459_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D459_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.510e-43 Identity = 87/183 (47.54%), Postives = 113/183 (61.75%), Query Frame = 3
Query: 366 IVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAKFSVSHG----VPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDSGEDVTCSDQFWV 902
+VV F+GT + W+ +L+ Y +GC C+VH GF AY ++ QVR V LQ +PDA I +TGHSLG A+A C +DL V V FG PRVGN+ FA F S P++R+VHNRDPVPHLP ++G+ H P EVF++ +QTSY+VC+DSGED CSDQF V
Sbjct: 40 LVVAFAGTSMDDIVEWMANLDFKKEDFPY--DGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLMSLSYNV--RRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHNRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDPQCSDQFLV 218
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A6B2LEG4_9EUKA (Lipase_3 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEG4_9EUKA) HSP 1 Score: 161 bits (407), Expect = 2.000e-41 Identity = 91/241 (37.76%), Postives = 127/241 (52.70%), Query Frame = 3
Query: 177 PGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAKFSVSHGVPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDS-GEDVTCSDQF 896
PG+ V+ + N G+VGV+ S YI +V F+GT+P S+KNWIDD++ P S++ C C VH GF Y VQD+VR L P+ + +TGHSLG LA L LDL T V + +Y FG PR+GN+ F ++ +S ++RV H DPVPHLP E++G+ H P EVF++ +Q+SY +C + GED +CSDQF
Sbjct: 3 PGLQMVTAFHNDTTNANGYVGVN-----------PSAGYI------------------------IVAFTGTNPLSIKNWIDDIDTIPTSYS----ACSGCAVHEGFYHTYLSVQDEVRNGFRSILLKYPNLPVQVTGHSLGAVLAELGALDLIQTF-RVRVSSMYHFGGPRLGNDAFTRYLLSSIGEVYRVTHWMDPVPHLPPEAFGFVHNPQEVFYNDDQSSYTLCSSTNGEDPSCSDQF 203
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A6T8C1N8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8C1N8_9EUKA) HSP 1 Score: 162 bits (410), Expect = 4.900e-41 Identity = 94/281 (33.45%), Postives = 140/281 (49.82%), Query Frame = 3
Query: 78 FDESVAREIVQLTEAAYCSAEL----AGWNCTVCQSFPGM-TNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAKFSVSH--GVPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFD-AEQTSYVVCDDSGEDVTCSDQF 896
+D++ + +V + AYC+ L + W+C C+ FP + + +G+S G+V D + + I+V F+GTDP + WIDD++ +S+ GC CKVH+GF Y V+ Q+ + +P + + ITGHSLG A+A +++ A FA +Y FG PRVGN FA ++ S P FRV H RDPVPHLP E G+RHP E+F+ + + SY CD SGED +CSD++
Sbjct: 25 YDKARSARLVAFSGIAYCTGTLGKGVSNWDCAHCKDFPSVKASTFSAKGESEQ-NGYVAYDPNDGADGS--------------------------------ILVVFTGTDPLKFQQWIDDIDTIAVSYP----GCAGCKVHQGFYDNYKAVRSQMSTLLDSAAVEHPKSPVYITGHSLGAAIALHAAVEVAGGSHASRFAGMYTFGQPRVGNSAFATWAASTLGRSPHFRVTHRRDPVPHLPLEVMGFRHPEREIFYSGSSEGSYKGCDGSGEDSSCSDKY 268
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A4D9CWF0_9STRA (Lipase_3 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWF0_9STRA) HSP 1 Score: 161 bits (408), Expect = 6.840e-41 Identity = 98/270 (36.30%), Postives = 136/270 (50.37%), Query Frame = 3
Query: 126 YC-SAELAGWNCTVCQSFPGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEV------FAKF----SVSHGVPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDSGEDVTCSDQFWV 902
YC ++ W C+ C P T V + N GFVG D E +VV+F+GTD S+ NWIDDL+ + + +GC CKVH GFL Y ++ Q++ V ++ +P A + +TGHSLG ALA LC +DL L+L + P V FG PRVGN+ F+ F S S + +R+VH+RDPVPHLP S+G+ H P EVF+ +T Y +CD +GED CSD + +
Sbjct: 10 YCRTSACEAWACSACSRHP-RTEVRRVYDNVHNGNGFVGWDPVEGV-----------------------------------VVVSFAGTDTSSVANWIDDLDE--VKTPWPLQGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDL-LSL-SYPVRAVVNFGQPRVGNQHVRDAGGFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLI 239
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A9V5U1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5U1_MONBE) HSP 1 Score: 160 bits (406), Expect = 1.090e-40 Identity = 106/281 (37.72%), Postives = 141/281 (50.18%), Query Frame = 3
Query: 78 FDESVAREIVQLTEAAYCSAE-LAGWNCTVCQSFPGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPV--YIFGAPRVGNEVFAKFSVSHGVPI-FRVVHNRDPVPHLPFESWGYRHPPTEVFFDAE---QTSYVVCDDSGEDVTCSDQFW 899
FD ++A V L+ AAYC + W+C C V + +DV++ ET T+ YI + + RI+V F GT L WIDDL+ Y G + KVH GF AY V+ V V + L +NP+ IL+TGHSLG ALA +C LDL + P A + Y +G PRVGN+ FA+F SH + +R+ HN DPVPHLP ES G+ H TEV++ + Q+S VCD SGED CS+Q W
Sbjct: 14 FDYNIALGSVNLSAAAYCDPSVIKAWSCPPC------------------VGTGLALDVKDVFHASETDTN-GYIGIDEAGK---------------RIIVAFQGTH--DLTQWIDDLDFFKADLQYPGASS-DVKVHSGFYKAYRQVKQNVDQVVNQTLFNNPEYTILVTGHSLGAALAAMCSLDLSI---GHPQARILHYTYGQPRVGNQAFAQFYESHNLAQHYRMTHNEDPVPHLPLESMGFYHISTEVYYGEKFEGQSSLKVCDGSGEDPNCSNQHW 254
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: W7U0K9_9STRA (Lipase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0K9_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.090e-40 Identity = 105/281 (37.37%), Postives = 144/281 (51.25%), Query Frame = 3
Query: 78 FDESVAREIVQLTEAAYCSAELA--GWNCTVCQSFPGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAKFSVSHG----VPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDSGEDVTCSDQFWV 902
++ + R I+ EA+Y A WNC+ C P + V + + + GFVG + E GAL VV F+GT + W+ +L+ + +GC C+VH GF AY ++ QVR V LQ +PDA I +TGHSLG A+A C +DL V V FG PRVGN+ FA F S P++R+VH+RDPVPHLP ++G+ H P EVF++ +QTSY+VC+DSGED+ CSDQF V
Sbjct: 324 YNITAVRTILDYAEASYSCKTSACEAWNCSTCSRHP---DTEVRRISAPDGDGFVGYNSVE------------------GAL-----------------VVAFAGTSMDDIVEWMANLDFK--KEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLMSLSYNV--RRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLV 562
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A7S3GUH3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUH3_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.310e-40 Identity = 92/274 (33.58%), Postives = 133/274 (48.54%), Query Frame = 3
Query: 93 AREIVQLTEAAYCSA------ELAGWNCTVCQSFPGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAKFSVSHGVPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDSGEDVTCSDQF 896
A ++L AAYC+ + W+C VC +FP MT S + + GFVG D + I+++FSGTDP S++NWIDDL+ + + Y C C+VH GF ++ V+D V+ V+ P A + +TGHSLG A+A + T V + Y +G PRVG + F ++ S FRV HNRDPVPHL ES+ + H P EVF++ + + +C GED TC+DQ+
Sbjct: 39 AERYIKLAGAAYCTDPKLRKNSIDDWSCKVCANFPNMTAHS-FKSSKNDANGFVGYDGDANE-----------------------------------IIISFSGTDPTSIRNWIDDLKFRKVKYPY----CDKCEVHDGFYHSFQSVEDDVKKFVSSFQAQYPTATLAVTGHSLGAAMAAHAVAE--YTHMGVTVSTAYAYGMPRVGEDSFEQWYASVVPGTFRVNHNRDPVPHLAPESFDFHHMPYEVFYEDDYKQWKLCSFEGEDKTCADQY 270
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Match: A0A7S1JE99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JE99_9EUGL) HSP 1 Score: 160 bits (404), Expect = 3.770e-40 Identity = 103/271 (38.01%), Postives = 142/271 (52.40%), Query Frame = 3
Query: 120 AAYCSAE-LAGWNCTVCQ----SFPGMTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPLLSISSKPRPRIVVTFSGTDPKSLKNWIDDLEAAPISHAYAGEGCPNCKVHRGFLAAYDVVQDQVRAAVAKHLQHNPDAEILITGHSLGGALATLCFLDLQLTLGAVPFAPVYIFGAPRVGNEVFAK-FSVSHGVPIFRVVHNRDPVPHLPFESWGYRHPPTEVFFDAEQTSYVVCDDSGEDVTCSDQFWVSFCV 914
AAYC+A + W C C SF G VSV+ + + + ++G +P P G +I+V F GT + L NW+ +L ++ GCPNC VH GF A + V+++V A V + L+ + A + ITGHSLGGALA LC DL AVP V+ +G+PRVG+ +F + F + +R+ H RDPVPHLP S GYRHP +EVF+D T+Y+VC+ SGED CS QF VS +
Sbjct: 49 AAYCNASRIRMWVCGPCLQADVSF-GWQPVSVVTNSTTSTQVYIG-----------RLAAPTVFFPPPG-----------------KIIVAFRGT--QDLVNWLYNLSFKTLTGI---PGCPNCMVHSGFWATWSSVRERVAAQVLERLRAHRGAHVFITGHSLGGALAQLCAADLFHNF-AVPIHAVFTYGSPRVGDAIFVRHFETAVPRASWRLTHWRDPVPHLPPTSLGYRHPSSEVFYDENSTNYLVCNRSGEDPDCSAQFSVSLAI 284 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig105.694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig105.694.1 >prot_S-firma_F_contig105.694.1 ID=prot_S-firma_F_contig105.694.1|Name=mRNA_S-firma_F_contig105.694.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=296bp MTNVSVLQGQSRNVRGFVGVDVRESSREEETSTSPAYIRVPKGALPVVEPback to top mRNA from alignment at S-firma_F_contig105:2969..5993- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig105.694.1 ID=mRNA_S-firma_F_contig105.694.1|Name=mRNA_S-firma_F_contig105.694.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3025bp|location=Sequence derived from alignment at S-firma_F_contig105:2969..5993- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig105:2969..5993- >mRNA_S-firma_F_contig105.694.1 ID=mRNA_S-firma_F_contig105.694.1|Name=mRNA_S-firma_F_contig105.694.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1776bp|location=Sequence derived from alignment at S-firma_F_contig105:2969..5993- (Sphaerotrichia firma ET2_F female)back to top |