mRNA_S-firma_F_contig1043.615.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: D8LJD6_ECTSI (Ribosomal protein L11 methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJD6_ECTSI) HSP 1 Score: 581 bits (1498), Expect = 2.900e-199 Identity = 306/443 (69.07%), Postives = 338/443 (76.30%), Query Frame = 2
Query: 98 SGWLGFV------PSSSFGTHPH-ITGRARPRWL----RQPQQSRVAPRP----AWLSTDVNEAERQEPVDELWWEEGGGVQSLEIRCRGANGDDLDPWFLSELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEVGRLRIRFPWHPALPPSELRPDQVELELEGGRAFGTGEHPTTSMCCTWLEGNVEGQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISGLRRG 1381
S W F+ PS+ F H H + R+ R R+P + PRP A DVN A +Q VDELWWEEGG VQSLEI CR A G +LDPWFLSELLMD+GAMSVSVDD+ LGT E PLLHEH SKAFDP VPLPS SGRKDMWGG+SRVVALFP +WDL GVVA+VEEV + QEGWDPIEVGRLRIRFPWH LPPSEL+P QVELELEGGR+FGTGEHPTTSMCCTWLE NV GQRVLDYGSGSGILGLA+LSFGA EAVGVELDLSAIASAA NAA NGLKMDTY+PQEVG+G G+DLVLTKLAVSE ++ + + DAMEP SVADG IS EELG FDVTVANILA PI+RLQP+FAY TRPGGKLALSGVL+EQA AVL+AY + FDLEVTE+MGGWV +SG+RRG
Sbjct: 9 SSWQAFLVSSLILPSTPFVNHAHQLPSRSSSRSCAMNRRRPSPTTAIPRPLPSLATADADVNAAGQQSAVDELWWEEGGAVQSLEIACRDAKGSELDPWFLSELLMDVGAMSVSVDDADLGTGAEVPLLHEHTNSKAFDPSVPLPSVSGRKDMWGGSSRVVALFPREWDLAGVVATVEEVLELASPLSFKVDDVVDKDWVKTVQEGWDPIEVGRLRIRFPWHTPLPPSELKPGQVELELEGGRSFGTGEHPTTSMCCTWLEDNVAGQRVLDYGSGSGILGLAALSFGAVEAVGVELDLSAIASAAVNAANNGLKMDTYYPQEVGTGDGLDLVLTKLAVSE---KATEEPSEDAMEPPSVADGFPISTEELGAFDVTVANILAGPIIRLQPVFAYLTRPGGKLALSGVLQEQAGAVLSAYAESFDLEVTESMGGWVLLSGVRRG 448
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: A0A835Z7L3_9STRA (Ribosomal protein L11 methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L3_9STRA) HSP 1 Score: 268 bits (684), Expect = 2.450e-78 Identity = 156/373 (41.82%), Postives = 209/373 (56.03%), Query Frame = 2
Query: 272 WWEEGGGVQSLEIRCRGANGDDLDPWFLSELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEVGRLRIRFPWHPALPPSELRPDQVELELEGGRAFGTGEHPTTSMCCTWLEGNVE---GQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKF-DLEVTETMGGWVRISGLRR 1378
WW E +++L I C G+ LD L L ++GA+SV+ +D+A GT +E PLLHEH S + + + + W T+ V A FP W+L G + +E+V S Q+ W PI +G LRIRFPWH AL QVEL LEGGRAFGTGEHPTT MCCTWLE ++ G RVLDYGSGSG+LGLA+L +GA EA+G+E+D+ AI S+ NA N L + YHP+EV + +G +++R + A P A G + E FD+TVANILA ++R +P + TR GG LA+SGVL QAD V+ AY F D+ + E G WV I+ ++
Sbjct: 59 WWGEDTQLKALRIPCSDCKGNVLDAGTLMGFLSEVGALSVTAEDAARGTDQEIPLLHEHDASLGLE--TTWTNIASGSEYWANTT-VTAHFPRDWELQGTIDMIEQVFNLPCALSFSVDDIQDKDWVKSVQQTWHPITLGNLRIRFPWHDALNEDSAGTGQVELCLEGGRAFGTGEHPTTRMCCTWLERCLQVSPGARVLDYGSGSGLLGLAALKYGASEAIGIEVDVDAILSSLYNAQMNDLDIKFYHPREVLNDEG------------QVERVEFRQIQAAAAPAGFAAGPVVQQLE-HPFDLTVANILAGCLIRTEPAISAMTRSGGLLAMSGVLHYQADEVMKAYSKHFYDIMIAEQDGEWVLITATKK 415
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: A0A6V1NRU4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRU4_HETAK) HSP 1 Score: 224 bits (572), Expect = 1.700e-61 Identity = 148/416 (35.58%), Postives = 206/416 (49.52%), Query Frame = 2
Query: 290 GVQSLEIRCRGANGDDLDPWFLSELLMDIGAMSVSVDDSALGTQEESPLLHEH---------IQSKAFDPRVPLPSTSGR----KDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEVGRLRIRFPWHPALPPSE-----------------LRP--DQVELE----------------LEGGRAFGTGEHPTTSMCCTWLEGNVE----GQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEV-GSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFD-LEVTETMGGWVRISGLR 1375
G+++L I CR +G+DLDP LS+ LM+IGA SVS++DS GT E+P+ E + A P L +T+ + +W SRVVA P W+ VV V ++ QE W P+ +G +R++FPWH LP E ++P DQ E GG AFGTG+HPTT MC W++ + G +LDYG+GSGILG+ ++ FG + VGVE+D AI +A NA N L+M+ Y P+E+ + G+ + L KL D S+ D KFD+TVANILA P+ +L PI A FT+ GG L LSG+++ QAD +L Y FD ++V E GGWV +SG+R
Sbjct: 81 GLKALVIECRDDSGNDLDPSLLSDFLMEIGACSVSIEDSNRGTAAETPVYREPPTGGVVFDGADTLAGTPTGALQATAAAAAAPRPLWAA-SRVVAHLPAAWNSEEVVMLVGATFELAVLPAFRVEDIQDRDWVSAVQENWQPMILGSVRVKFPWHSDLPAEEGVTDILLQGSFQSVEEVVKPIADQSRRERAAARMAATRKTYSKGAAGGAAFGTGDHPTTRMCARWVQEQAQRARPGTTLLDYGAGSGILGMIAMKFGIQRVVGVEIDRDAIRTAIENAKLNKLEMEFYLPEEIEANSNGLSVRLNKLKEKYNHDVSVENIQSDE------------------KFDITVANILAGPLKKLAPIIAKFTKEGGVLGLSGIIDHQADIMLEVYSTYFDDMKVVEEEGGWVCVSGVR 477
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: L1JJW5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JJW5_GUITC) HSP 1 Score: 185 bits (469), Expect = 1.040e-47 Identity = 132/370 (35.68%), Postives = 187/370 (50.54%), Query Frame = 2
Query: 308 IRCRGANGDDLDPWFLSELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEVGRLRIRFPWHP-------ALPPSELRPDQVELELEGGRAFGTGEHPTTSMCCTWLEGNV---EGQRV--LDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLK-MDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISGLRR 1378
+R NG +D LSELLM+ GA+SV V+D+ GT++E P+ +E GR + + V A +P WD+ V+ V + Q+ W PI + L +RFPWH L SE+ EL LEGG AFGTGEHPTT +CC WL+ + GQRV +DYG+GSG+LGL SL FGA+ AV +I +A +NA NG++ Y P + K +L+ E++ + + M LS D + P++ +DV V+NILA P++RL P A +R G L LSG+L EQA+ V+ AY + F ++ E G WV I+G R+
Sbjct: 96 VRQDDENGRTIDADELSELLMETGALSVIVEDADRGTEQELPIFNE----------------PGRAERYWNNCNVTAFYPHGWDIPAVLEMVVKSMDLPVVPRYAVDEVRDQDWVKLVQQSWKPILIDHLLLRFPWHSKEDIDSVVLQDSEIH----ELMLEGGMAFGTGEHPTTRLCCRWLQQKLALEHGQRVRVMDYGAGSGVLGLTSLRFGAEAAV------DSIVAAHSNARLNGMESFKVYLPSS--TAKDAELI-------EDLRYAAQLRQLSGM--LSWNDMLETLPDDCHGYDVVVSNILAGPLIRLAPELARLSRAQGLLGLSGILHEQAERVIEAY-EPFYEQLREDQG-WVLITGKRK 426
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: A0A6T6NQS7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6NQS7_9RHOD) HSP 1 Score: 181 bits (460), Expect = 1.450e-47 Identity = 117/363 (32.23%), Postives = 177/363 (48.76%), Query Frame = 2
Query: 296 QSLEIRCRGANGDDLDPWFLSELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEVGRLRIRFPWHPALPPSELRP-DQVELELEGGRAFGTGEHPTTSMCCTWLEGNVEG-QRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISGLRR 1378
Q +++ G D +D LS+LLM++GA+SVSV+D+ GT E PL HE + + +P + G K W + V ALF + V+ +V Q+ + PI++GR+ I FPWH + +R V +++ G AFGTGEH TT + WL+ +EG ++VLDYG+GSG+L +A L GA A VE+D A++++ +NA RN + + + LP++ PE FD+TVANILA P+ +L P+ A TR GGK+ALSG+L QA + Y FD++ GW ++G++R
Sbjct: 4 QWVKVDISGEEYDGVDVELLSDLLMELGAVSVSVEDALRGTDAEKPLFHEPLPGNGVEWIMPADAVGG-KTYWPKCT-VKALFTEDAAVESVIMTVGAELNLPRTPQYEAESVRNEDWVVKVQQSFKPIQIGRILITFPWHSDAETASMREASPVIIQMSPGMAFGTGEHWTTQLVLQWLQDAIEGDEKVLDYGAGSGVLAIAGLKLGAARARLVEIDQEALSTSQSNAERN-------------------------TIEDRCEFFLPEN----------------EPEPSAAFDITVANILAEPLRKLAPLLAAHTRCGGKVALSGILAMQASGLCDVYSQWFDMKQAAVDSGWALLTGVKR 323
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: A0A2I6S8S3_9RHOO (Ribosomal protein L11 methyltransferase n=1 Tax=Aromatoleum pumilum TaxID=2067960 RepID=A0A2I6S8S3_9RHOO) HSP 1 Score: 171 bits (433), Expect = 3.650e-44 Identity = 125/345 (36.23%), Postives = 163/345 (47.25%), Query Frame = 2
Query: 353 LSELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEV-GRLRIRFPWHPALPPSELRPDQ--VELELEGGRAFGTGEHPTTSMCCTWLEGNVE-GQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISGLR 1375
LSE LMD GA+SVS++D+ GT E+P E + A +W SRV+ALF L +A +Q ++PI + RL I WH A PD + +EL+ G AFGTG HPTT +C WL V G RVLDYG GSGILG+A+L GA++ +GV++D A+A+A NAARNG+ M H SG+ ++ +FD+ VANIL P+ L P+ A PGG++ALSGVL EQADAV+AAY LEV T GW R+ G R
Sbjct: 17 LSEALMDAGALSVSIEDADAGTAAETPQFGEPGLAPA--------------GLWDH-SRVIALFDADAALERALAEAAAAAGFDTVPPFTCEPVAEQNWVQLTQRQFEPIRIDARLWIVPSWHEA-------PDAGAINIELDPGMAFGTGSHPTTRLCLQWLCDTVTPGARVLDYGCGSGILGIAALMLGARDVLGVDIDDKALAAAQDNAARNGVTMRVQH-----SGETLE----------------------------------------ERFDIVVANILTNPLCVLAPLLAARVAPGGRIALSGVLGEQADAVIAAYAPWITLEVGATHEGWARLEGRR 294
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: W7TM81_9STRA (Ribosomal protein l11 methyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM81_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.470e-44 Identity = 138/399 (34.59%), Postives = 202/399 (50.63%), Query Frame = 2
Query: 272 WWEEGGGVQSLEI-----RCRGANGDDLDPWFLSELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSS--QEGWDPIEVG-RLRIRFPWHP-----ALPPSELRPDQVE-LELEGGRAFGTGEHPTTSMCCTWLEGNV------------EGQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEV---GSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTR-PGGKLALSGVLEEQADAVLAAYGDKF-DLEVTETMGGWVRISGLR 1375
W E G +S ++ C + +DPW LSELL++ GA S ++D+A T++E+P+ EH + P+ S + +W S V+A + + D+ V++ ++E QE W P+ +G RL ++F WH AL S + V+ L LEGG AFG+GEHPTT MCC WL+ ++ EG V DYG+GSGIL +A+L FGA A GVE+D+ AI SA NA NGL+M P E G+ GI V +L + D S+ ++ + + I+P DV +ANIL P++ L + T+ GGK+AL+G+LEEQA+ V+AAY F D+ + G WV + G R
Sbjct: 109 WTEPWTGAESNDLVRIIFDCYEKDRMLIDPWLLSELLLETGAYSSQIEDAAKDTRDETPIFGEHGE----------PACSEK--IWN-RSLVMADYGLDVDVGSVLSLIKEAFQLGASYPVRYRLERIVDRDWQKEVQESWKPLLLGDRLLVKFTWHEEEDVKALLASRTAVEDVKVLALEGGAAFGSGEHPTTVMCCAWLQSHLAAESAKAGTDGGEGLSVCDYGAGSGILAMAALLFGAGTAFGVEIDVFAIQSAYRNAEMNGLQMAFVQPVETRTEGTEGGIACVTYQLV---QPDGSVDEEDEE----------VQIAPT-----DVMLANILKRPLIELSKQISSLTKLEGGKVALAGLLEEQAEDVMAAYRPYFPDIAPADQEGEWVLLVGTR 476
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: A0A4R6E0I3_9RHOO (Ribosomal protein L11 methyltransferase n=2 Tax=Azoarcus TaxID=12960 RepID=A0A4R6E0I3_9RHOO) HSP 1 Score: 167 bits (422), Expect = 1.090e-42 Identity = 118/345 (34.20%), Postives = 165/345 (47.83%), Query Frame = 2
Query: 353 LSELLMDIGAMSVSVDDSALGTQEESPLLHE--HIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEV-GRLRIRFPWHPALPPSELRPDQVELELEGGRAFGTGEHPTTSMCCTWLEGNVE-GQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISGLR 1375
LS+ LM+ GA+SVS++D+ GT+ E P E H+ + +D SRV+AL DL ++A+ +Q ++PI + R+ I WH A P D + +EL+ G AFGTG HPTT +C WL V+ GQ VLDYG GSGILG+A+ GA E +GV++D AI +AA NA+RN +++ H +E PL A FD+ VANIL P+ L P A PGG++ALSGVLE QA+ V+AA+ +L+V ++ GWVR+ G R
Sbjct: 17 LSDALMEAGALSVSIEDADAGTEAEKPQFGEPGHLPTALWD-----------------HSRVIALLDADADLPALLAAASAAAGLASVPSYTTETVAEQNWVQLTQSQFEPIRITDRMWIVPSWHEA--PDG---DAINIELDPGMAFGTGSHPTTRLCLEWLCDAVQPGQTVLDYGCGSGILGIAAARLGAAEVLGVDIDDKAIEAAADNASRNQVRLRLQHSRE---------------------------------PLDTA------------FDIVVANILTNPLCVLAPAIAAHVAPGGRVALSGVLEPQAEQVIAAWAPYIELKVGASLDGWVRLEGQR 294
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: A0A4S4APV2_9RHOO (Ribosomal protein L11 methyltransferase n=1 Tax=Azoarcus rhizosphaerae TaxID=2565932 RepID=A0A4S4APV2_9RHOO) HSP 1 Score: 167 bits (422), Expect = 1.280e-42 Identity = 119/343 (34.69%), Postives = 163/343 (47.52%), Query Frame = 2
Query: 353 LSELLMDIGAMSVSVDDSALGTQEESPLLHE--HIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEV-GRLRIRFPWHPALPPSELRPDQVELELEGGRAFGTGEHPTTSMCCTWLEGNVE-GQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISG 1369
LS+ LM+ GA+SV ++D+ GT+ E+P E H ++ ++ SRVVALF + DLT +A +Q ++PI + RL I WH S P+ + +EL+ G AFGTG HPTT +C WL V+ G VLDYG GSGILG+A+ GA + +GV++D A+ +A NAARNG+ + H + P DA +FDV VANIL P+ L P+ A PGG++ALSGVLE QA+ V+AAY LEV +T GWVR+ G
Sbjct: 17 LSDALMEAGALSVGIEDADAGTEAETPQFGEPGHHPTRLWE-----------------HSRVVALFDAEADLTVALAQAAGSAGFDAVPPFTVDQVAEQNWVQLTQSQFEPIRITDRLWIVPSWH-----SAPDPEAINIELDPGMAFGTGSHPTTRLCLQWLCETVQPGASVLDYGCGSGILGIAAAKLGAADVLGVDIDDKALVAARDNAARNGVTLRLQHSRA------------------------PLDA---------------------RFDVVVANILTNPLCVLAPLLAGRVAPGGRMALSGVLETQAEQVIAAYAPFIRLEVGDTHEGWVRLEG 292
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Match: UPI001BB8F8E2 (50S ribosomal protein L11 methyltransferase n=1 Tax=Sulfuritalea sp. TaxID=2480090 RepID=UPI001BB8F8E2) HSP 1 Score: 166 bits (421), Expect = 1.500e-42 Identity = 122/342 (35.67%), Postives = 163/342 (47.66%), Query Frame = 2
Query: 356 SELLMDIGAMSVSVDDSALGTQEESPLLHEHIQSKAFDPRVPLPSTSGRKDMWGGTSRVVALFPVKWDLTGVVASVEEVXXXXXXXXXXXXXXXXXXXATSSQEGWDPIEV-GRLRIRFPWHPALPPSELRPDQVELELEGGRAFGTGEHPTTSMCCTWLEGNVE-GQRVLDYGSGSGILGLASLSFGAKEAVGVELDLSAIASAATNAARNGLKMDTYHPQEVGSGKGIDLVLTKLAVSEEMDRSLPKDAMDAMEPLSVADGIAISPEELGKFDVTVANILAAPIMRLQPIFAYFTRPGGKLALSGVLEEQADAVLAAYGDKFDLEVTETMGGWVRISGLR 1375
++ LM GA+SVS++D+ GT E+P E P PL W SRVV LF DL + + +Q +DPI + GRL I WH A P V L L+ G AFGTG HPTT +C WLE NV G+ VLDYG GSGILG+A+L GA++A+GV++D +A+A+AA NAARNG+ + + GSG ++ FD VANIL P++ L P+ + GG+LALSGVLE QA+ V+AAY L V T GW+R+ G++
Sbjct: 18 ADALMAAGAISVSIEDALAGTALETPQFGE-----PGSPNAPL---------WA-KSRVVGLFEPVVDLRARICAALGAARLAVPAEIACAEVAEQDWVRLTQSQFDPIRISGRLWIVPSWHVAPDPRA-----VNLVLDPGLAFGTGSHPTTRLCLEWLEANVAPGRCVLDYGCGSGILGIAALRLGAQDALGVDIDPAALAAAAANAARNGVAL-----RLAGSGDRVE----------------------------------------ESFDCVVANILTHPLVLLAPLLCARLKAGGRLALSGVLEAQAEQVIAAYAPHIGLRVGATHEGWIRLEGMQ 294 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1043.615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1043.615.1 >prot_S-firma_F_contig1043.615.1 ID=prot_S-firma_F_contig1043.615.1|Name=mRNA_S-firma_F_contig1043.615.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=439bp MTALRNLWSGWLGFVPSSSFGTHPHITGRARPRWLRQPQQSRVAPRPAWLback to top mRNA from alignment at S-firma_F_contig1043:11928..18485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1043.615.1 ID=mRNA_S-firma_F_contig1043.615.1|Name=mRNA_S-firma_F_contig1043.615.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6558bp|location=Sequence derived from alignment at S-firma_F_contig1043:11928..18485- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1043:11928..18485- >mRNA_S-firma_F_contig1043.615.1 ID=mRNA_S-firma_F_contig1043.615.1|Name=mRNA_S-firma_F_contig1043.615.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2634bp|location=Sequence derived from alignment at S-firma_F_contig1043:11928..18485- (Sphaerotrichia firma ET2_F female)back to top |