mRNA_S-firma_F_contig10404.588.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A067CH85_SAPPC (Fe_hyd_SSU domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH85_SAPPC) HSP 1 Score: 224 bits (570), Expect = 3.450e-66 Identity = 130/292 (44.52%), Postives = 174/292 (59.59%), Query Frame = 1
Query: 1 QITGTQVKDLFAPAGVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRA-HLPAPDSEASKVTYSRVGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QITGT VK LF+ D+++H T+MPC+DKKLEASR DF D RDVDCVL ++E++D+ E +D AALP+ + P ER V+D T LVG G+GG+L+++FR AA L+ V +EG L + GRN DF EV+L VDG VL+FA AYGFRNI +V+ K+KR + PY F+EIMACP GC NGGGQVK + E ++ALV KV DR P+ + +++ + + P + AR V HT++ AVPKL A +KW
Sbjct: 238 QITGTLVKRLFSQP---TDRVYHATVMPCYDKKLEASRNDFLDAATETRDVDCVLAASEVLDMLVEANVDLAALPDAVLTPD-------------ERLWSGVAD--THLVGATEGEIGAGGYLEHIFRFAAKELYNVDVEGPLPYVQGRNADFREVSLVVDGKEVLKFALAYGFRNIQTVLMKIKRNKCPYQFVEIMACPGGCLNGGGQVKPESAE--------ANKALVEKVYATFRDRTLRAPSANPACAQLYATYLDDTPFGQKARSVFHTRYHAVPKLELANPFGIKW 503
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A5D6XLY1_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLY1_9STRA) HSP 1 Score: 221 bits (563), Expect = 8.090e-65 Identity = 131/293 (44.71%), Postives = 175/293 (59.73%), Query Frame = 1
Query: 1 QITGTQVKDLFA-PAGVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSRV-GGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G +K + + G+ ++H +MPCFDKKLEASR DF D RDVDCVL + E+V++ Q+IDFAAL + P E L VS+DG ++G +A SGG L+++FR AA L GV + G LE+ GRNPDF EVTL V+G VL+FA AYGFRNI SV+TK++R + PYH++E+MACPSGC NGGGQ+K + TL+ R + S+ + L R P D+ + Y + GG P SE AR HT++ AVPKL + L +KW
Sbjct: 267 QIAGALIKHMVSREQGLAATDVYHVAVMPCFDKKLEASRKDFLDAETQVRDVDCVLATTEIVELIAAQSIDFAALELAQLSPQ-------------EILLSGVSEDGAAVLGSNV-NASSGGQLEHIFRYAAKELFGVDVRGPLEYVVGRNPDFREVTLVVNGQEVLKFAIAYGFRNIQSVMTKLRRNKCPYHYVELMACPSGCLNGGGQIKPRS----TLLASELLRDVTSRFEEL---RVRAPT-DNPGCRYVYDKFCGGQPFSEPARATFHTRYHAVPKLELSNPLGIKW 537
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A3R7KXU8_9STRA (Fe_hyd_SSU domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KXU8_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.200e-64 Identity = 134/294 (45.58%), Postives = 179/294 (60.88%), Query Frame = 1
Query: 1 QITGTQVKDLFA-PAGVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSE-ASKVTYSR-VGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G+ +K + GVT ++H +MPCFDKKLEASR DF D +DVDCVL + E++D+ IDFA+L ++ P E L VS+DG+ ++G +A SGG L+++FR AA L V + G LE+ AGRNPDF EV+L V+G VL+FA AYGFRNI S++TK++R R PYH++EIMACPSGC NGGGQ+K + TL+ + S+ L H+ P + A K Y + +GG P SEAAR VLHTQ+ AVPKL + L +KW
Sbjct: 254 QIAGSLIKRFVSGERGVTPIDVYHVAVMPCFDKKLEASRKDFQDPEHETKDVDCVLATTEIIDLIESLGIDFASLELANLSPE-------------EVMLSGVSEDGSSVLGSNL-NATSGGQLEHIFRFAAKELFNVEVNGPLEYMAGRNPDFREVSLVVEGKEVLKFAIAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIKPKS----TLLASELLDNVTSRFQEL-----HVCEPVANLAVKYVYEKYLGGAPFSEAARSVLHTQYHAVPKLEQSNPLGIKW 524
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A662WUJ6_9STRA (Fe_hyd_SSU domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUJ6_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.070e-64 Identity = 133/293 (45.39%), Postives = 178/293 (60.75%), Query Frame = 1
Query: 1 QITGTQVKDLFAPA-GVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSR-VGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G+ +K GVT ++H +MPCFDKKLEASR DF D +DVDCVL + E++D+ IDFA+L D+ E L +S+DG+ ++G + +A SGG L+++FR AA L V ++G LE+ AGRNPDF EV+L V+G VL+FA AYGFRNI S++TK++R R PYH++EIMACPSGC NGGGQVK + TL+ S L + R P D+ A K Y + + G P SEAAR+VLHT++ AVPKL + L +KW
Sbjct: 279 QIAGSLIKRFVCGEHGVTPSDVYHVAVMPCFDKKLEASRKDFLDPEHQVKDVDCVLATTEIIDLIEALEIDFASLELADLSSE-------------ELMLSGISEDGSSVLGS-SLNASSGGQLEHIFRFAAKELFNVDVDGPLEYVAGRNPDFREVSLVVEGQEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQVKPKS----TLLA---SELLDNATSHFQELRVRAPT-DNPAVKYVYEKHLAGVPFSEAARKVLHTRYHAVPKLELSNPLGIKW 549
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: H3GG46_PHYRM (Fe_hyd_SSU domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG46_PHYRM) HSP 1 Score: 219 bits (557), Expect = 4.090e-64 Identity = 132/292 (45.21%), Postives = 178/292 (60.96%), Query Frame = 1
Query: 1 QITGTQVKDLFAPA-GVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSRVGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G+ +K + GV ++++H +MPCFDKKLEASR DF D + +DVDCVL + E++++ IDFA L +LA + E L VS+DG ++G + SA SGG L+++FR AA L V + G LE+ AGRNPDF EV+L V+G VL+FA AYGFRNI S++TK++R R PYH++EIMACPSGC NGGGQ+K + TL+ + S+ L + P + V +GG P SEAARRVLHTQ+ AVPKL + L +KW
Sbjct: 248 QIAGSIIKRFVSGEHGVAPNEVYHVAVMPCFDKKLEASRKDFQDPEDATKDVDCVLATTEIIELIDSLNIDFATL---------ELASLSSE----EALLSGVSEDGLSVLGS-SLSASSGGQLEHIFRFAAKELFNVEVNGPLEYVAGRNPDFREVSLVVEGKEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIKPKS----TLLASELLDNVTSRFQEL---QVRDPVANPAVKYVYEKYLGGVPFSEAARRVLHTQYHAVPKLEQSNPLGIKW 518
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A3M6VN20_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN20_9STRA) HSP 1 Score: 218 bits (554), Expect = 7.230e-64 Identity = 128/293 (43.69%), Postives = 177/293 (60.41%), Query Frame = 1
Query: 1 QITGTQVKD-LFAPAGVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSR-VGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G+ VK L G+ D+++H +MPCFDKKLEASR DF D + R+VDCVL + E++++ IDFA + ++ P E L VS+DG+ ++G + +A SGG L+++FR AA L V + G LE+ AGRNPDF EV+L V+G VL+FA AYGFRNI S++TK++R R PYH++EIMACPSGC NGGGQ++ + TL+ L+ V + + A K Y + +GG P SE AR VLHTQ+ AVPK+ + L +KW
Sbjct: 228 QIAGSIVKRFLSGERGIAPDEVYHVAVMPCFDKKLEASRKDFQDPEHATREVDCVLATTEIIELVESLNIDFAGVKPANLTPE-------------EIMLSGVSEDGSSVLGS-SLNASSGGQLEHIFRFAAKKLFNVEVSGPLEYVAGRNPDFREVSLVVEGKEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIRPKS----TLLATE----LLDNVTSRFQELQVREPTANPAVKYLYEKYLGGTPFSETAREVLHTQYHAVPKMEQSNPLGIKW 498
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A8K1CNM2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNM2_PYTOL) HSP 1 Score: 213 bits (543), Expect = 5.110e-62 Identity = 129/293 (44.03%), Postives = 175/293 (59.73%), Query Frame = 1
Query: 1 QITGTQVKDLFA-PAGVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSR-VGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G VK L G ++++H T+MPCFDKKLEASR DF D A+DVDCVL + E++D+ + F TD+ +LA A + L VS D + ++G +A SGG L+++FR AA L V ++G LE+ GRNPDF EV+L VDG VL+FA AYGFRNI S++TK++R + PYH++EIMACPSGC NGGGQ+K + TLV L++ V + D+ A + Y + + P SE+ARR LHTQ+ AVPK+ A L +KW
Sbjct: 251 QIAGALVKHLVGREKGFNANEVYHVTVMPCFDKKLEASRKDFLDEATEAKDVDCVLATTEVIDLMNSLGVSF-----TDL----ELAELTADEI----LLSGVSSDASTILGSNV-NASSGGHLEHIFRFAAKELFNVEVQGPLEYVVGRNPDFREVSLVVDGQDVLKFAIAYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPKS----TLVASE----LLANVTSRFQELQVRQPTDNPACRYVYEKYLENQPFSESARRALHTQYHAVPKMEQANPLGIKW 521
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: M4BN82_HYAAE (Fe_hyd_SSU domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN82_HYAAE) HSP 1 Score: 212 bits (540), Expect = 2.500e-61 Identity = 125/293 (42.66%), Postives = 176/293 (60.07%), Query Frame = 1
Query: 1 QITGTQVKDLFAPA-GVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSR-VGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G+ +K + G +++H +MPCFDKKLEASR DF D + ++VDCVL + E++++ + +DF AL + P E L VSDDG+ ++G + +A SGG L+++FR A+ L GV + G LE+ AGRNPDF EV+L V+G VL+FA +YGFRNI S++TK++R + PYH++EIMACPSGC NGGGQ+K + TL ++ L+ V + S A K Y +GG P SE AR VLHTQ+ AVPK+ + L +KW
Sbjct: 278 QIAGSIIKRFVSGEHGAAPHEVYHVAVMPCFDKKLEASRKDFQDAENATKEVDCVLATTEIIELIEKLDVDFVALELAKLTPE-------------EIMLSGVSDDGSSVLGS-SLNASSGGQLEHIFRFASKELFGVDVNGPLEYVAGRNPDFREVSLAVEGKEVLKFAISYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPKS----TL----QATGLLDNVTSRFQELQVRQPNASPAVKHVYETYLGGMPFSEVAREVLHTQYHAVPKMEQSNPLGIKW 548
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: A0A2D4BNQ6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNQ6_PYTIN) HSP 1 Score: 217 bits (552), Expect = 1.530e-60 Identity = 130/293 (44.37%), Postives = 177/293 (60.41%), Query Frame = 1
Query: 1 QITGTQVKDLFAPA-GVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSR-VGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI G VK + A G+ ++++H +MPCFDKKLEASR DF D ++DVDCVL + E++D+ +D AL +LA A E L +S DGT ++G + +AGSGG L+++FR AA L GV +EG LE+ AGRN DF EVTL V+G VL+FA AYGFRNI S++TK++R + YH++EIMACPSGC NGGGQ+K + E+ AL+ V + D+ A + Y + + G P S +ARR LHTQ+ AVPKL + L +KW
Sbjct: 249 QIAGALVKHVVAREHGIAPNEVYHVAVMPCFDKKLEASRKDFLDEETESKDVDCVLATTEIIDLMQTLNVDLNAL---------ELAQLTAD----ELMLSGISPDGTSVLG-TSLNAGSGGQLEHIFRYAAKELFGVTVEGPLEYVAGRNSDFREVTLVVEGQEVLKFAIAYGFRNIQSIMTKIRRNKCQYHYVEIMACPSGCLNGGGQIKPKSS--------LEANALLENVTARFQELQVRSPLDNPACRYVYDKYLEGEPFSASARRALHTQYHAVPKLEQSNPLGIKW 519
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Match: F0WK24_9STRA (Nuclear prelamin A recognition factorlike protein pu n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WK24_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.960e-60 Identity = 127/292 (43.49%), Postives = 168/292 (57.53%), Query Frame = 1
Query: 1 QITGTQVKDLFAPAG-VTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDVDCVLTSAELVDVFTEQAIDFAALPETDIVPSADLAGAGAPSVDLERFLCSVSDDGTQLVGPVAASAGSGGFLDYVFRAAAAALHGVVLEGSLEFKAGRNPDFSEVTLEVDGAVVLQFAKAYGFRNISSVVTKMKRGRSPYHFIEIMACPSGCTNGGGQVKLAAHEDGTLVTPSESRALVSKVDGLLHDRAHLPAPDSEASKVTYSRVGGGPGSEAARRVLHTQFRAVPKLP-AEALAMKW 870
QI GT VKD + + D++ H T+MPCFDKKLEASR DF + RDVDCVL ++EL+D+F Q I+F L E + E + +S DG Q+V + A SGG L+++FR AA L V + G LE+ GRNPDF EV+L + G VVL FA AYGFRNI SV+TK++RG+ YH++E+MACPSGC NGGGQ+K ++ ES LVS V + K Y + P S+ A+R LHT++R VPKL A L ++W
Sbjct: 249 QIAGTIVKDFLSREFLIESDQVFHVTLMPCFDKKLEASRKDFQRSE-DNRDVDCVLATSELIDLFQAQKIEFKDLKEASLTQK-------------EAQMSGISPDG-QIVYGSSPFASSGGQLEHIFRYAAKNLFNVDICGPLEYSIGRNPDFREVSLSIQGKVVLHFAIAYGFRNIQSVITKLRRGKCSYHYVEVMACPSGCLNGGGQIKPSSS--------LESSTLVSSVTKRFQELREYDPQKDAFCKYIYEKYFDKPFSQVAQRALHTKYRRVPKLEQANPLGIRW 517 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10404.588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10404.588.1 >prot_S-firma_F_contig10404.588.1 ID=prot_S-firma_F_contig10404.588.1|Name=mRNA_S-firma_F_contig10404.588.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=291bp QITGTQVKDLFAPAGVTRDKIHHTTIMPCFDKKLEASRVDFTDTLLSARDback to top mRNA from alignment at S-firma_F_contig10404:3077..4074+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10404.588.1 ID=mRNA_S-firma_F_contig10404.588.1|Name=mRNA_S-firma_F_contig10404.588.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=998bp|location=Sequence derived from alignment at S-firma_F_contig10404:3077..4074+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10404:3077..4074+ >mRNA_S-firma_F_contig10404.588.1 ID=mRNA_S-firma_F_contig10404.588.1|Name=mRNA_S-firma_F_contig10404.588.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1746bp|location=Sequence derived from alignment at S-firma_F_contig10404:3077..4074+ (Sphaerotrichia firma ET2_F female)back to top |