mRNA_S-firma_F_contig10342.487.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A7V3ACS9_9BACT (UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3ACS9_9BACT) HSP 1 Score: 154 bits (389), Expect = 3.900e-41 Identity = 106/253 (41.90%), Postives = 143/253 (56.52%), Query Frame = 1
Query: 13 IVTDFDTHATWMSSKCPSTVLFPRAFSA-EQGRLLMRK-DAPQTLSVLRGIPIVPSFREVPPPQERAQAL-NKALKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVL-KPENLSRLKENAARLGYADAAFDVAGMVL 750
+ TDFDTH W++ C F+A E+G+ + P + + GIPI P F + ++RA + N+ L GD RP V+Q++ G V + ALLS P VVVVCG+ A + L +V A PH + VVGFT + + AAAD+V+SKPGGLTT+E+L+ G M I N IPGQE RN+D+LL GAA+K+ L L L +L P+ L+ LK NA RLG AAF+VA VL
Sbjct: 140 VTTDFDTHRLWVNQPC------DHYFTATEEGKAYLASWGVPSSDIAVTGIPIHPVFSRL---KDRATCIENQGLAGD--------RPIVLQLAGGFGVGPVRKILDALLSLDIPVEVVVVCGKNAELKKDLEKVRPAA--PHRLKVVGFTDRMDEWLAAADVVLSKPGGLTTSEVLACGAAMAILNPIPGQEFRNSDFLLENGAAIKINSLATLRLKLGALLGDPQRLATLKANARRLGRPQAAFEVAKFVL 373
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A2V9IEX0_9BACT (UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9IEX0_9BACT) HSP 1 Score: 149 bits (377), Expect = 2.260e-39 Identity = 97/247 (39.27%), Postives = 141/247 (57.09%), Query Frame = 1
Query: 19 TDFDTHATWMSSKCPSTVLFPRAFSA-EQGRLLMRK-DAPQTLSVLRGIPIVPSFREVPPPQERAQALNKA-LKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVL-KPENLSRLKENAARLGYADAAFDVA 738
TDF+TH W++ C R F+A ++G + ++ P T + + GIPI P F P +RA L + L GD RP ++Q++ G + ++ A+L+ P +VVV GR +L +V E S H +GFT + A AD+V+SKPGGLTT+E L+ G M I N PGQESRN+D+LL GAA+KL ++ LP+ L ++L +PE L++LK N+ RLG AAF+VA
Sbjct: 141 TDFETHRLWVNQPC------DRYFTATDEGAVYLQHWGVPATATTVSGIPIHPVFSR---PTDRAACLERQRLTGD--------RPVLIQLAGGFGVGPIEAIYRAVLAIEVPLEIVVVAGRNEEARRELEQV--EVPSRHRAKTLGFTDQMDELMAVADIVLSKPGGLTTSEALARGAAMAIVNPTPGQESRNSDFLLENGAAIKLSNIATLPHKLTQLLGEPERLAQLKANSRRLGKPQAAFEVA 368
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A7C4LZG5_9DELT (Glycosyltransferase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4LZG5_9DELT) HSP 1 Score: 147 bits (371), Expect = 2.610e-38 Identity = 104/262 (39.69%), Postives = 138/262 (52.67%), Query Frame = 1
Query: 1 PPPAIVTDFDTHATWMSSKCPSTVL-------FPRAFSAEQGRLLMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLK-PENLSRLKENAARLGYADAAFDVAGMVLA 753
P +VTDF H W+ C L + RA R+ + GIPI P+F P R L +AL G + RP V+ +S G V + ++L+ + P VVVCGR A + +L +A SPH + V+G+T + + A ADLVISKPGGLT++E+L+ GTP I N IPGQESRN D+LL GAAVK+ L L + +E +L P LSRLK A RL +AAFD+A VLA
Sbjct: 139 PQMTVVTDFMAHRLWVQEPCEHYFLATSECAAYVRALGVSAERI-----------AVTGIPIHPAFGR---PVRRGPCL-QAL------GCRGERPIVLLLSGGFGVGPVESILASVLAISRPIEAVVVCGRNARLERRLAALAPP--SPHRLRVLGYTSELDRWLAVADLVISKPGGLTSSEILARGTPFAIVNPIPGQESRNADYLLENGAAVKIGPLATLTWKIERLLADPPRLSRLKRQAKRLARPEAAFDIARRVLA 377
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A2V8G473_9BACT (UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8G473_9BACT) HSP 1 Score: 145 bits (367), Expect = 7.320e-38 Identity = 102/257 (39.69%), Postives = 135/257 (52.53%), Query Frame = 1
Query: 19 TDFDTHATWMSSKCPSTVLFPRAFSAEQGRLLMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSGDDVVDV---FTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLK-PENLSRLKENAARLGYADAAFDVAGMVLAAA-AGAPP 774
TDF+TH WM+ C + E L +T GIPI P F +R++AL K GLK RP V+Q+S G V + + +L P +VVVV G+ +L R+ + H V+GFT I AD+V+SKPGGLTT+E+L+ G M I N IPGQESRN+D+LL GAA+K+ ++ LP L +L P+ L LK NA R+ AAFDVA + L AA A APP
Sbjct: 141 TDFETHRLWMNEPCDHYT----TATEEGASYLASFGVDRTKITATGIPIHPVFSRA---SDRSEALRKH-------GLKGDRPIVLQLSGGFGVGPIEKLYRGILQIERPIDVVVVAGKNDKARKQLERI--DVPRQHRSQVIGFTTEIDELMGVADVVVSKPGGLTTSEVLARGAAMAIVNPIPGQESRNSDYLLESGAAIKINNIVTLPMKLGALLSDPQKLDALKANARRIAKPHAAFDVARIALMAAPAIAPP 381
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A7M2WWQ6_9BACT (Glycosyltransferase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WWQ6_9BACT) HSP 1 Score: 143 bits (361), Expect = 3.470e-37 Identity = 93/254 (36.61%), Postives = 139/254 (54.72%), Query Frame = 1
Query: 1 PPPAIVTDFDTHATWMSSKCPSTVLFPRAFSAEQGRLLMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLKP-ENLSRLKENAARLGYADAAFDVAGMVL 750
P + TDF+TH W++ C L+ A + E + L PQ + GIPI P F + ++ + LK G G RP V+Q++ G + ++ A+LS +P +VVVCG+ A +L + H V ++GFT + A AD+V+SKPGGLTT+E+L+ G M I N IPGQESRN+D+LL GAA+K+ ++ L Y L+ +L + L+ ++ NA R+ AAFDVA + L
Sbjct: 119 PQMTVTTDFETHRLWVNQPCD---LYTTA-TEEGAQYLRHWGVPQDDLRVTGIPIHPVFADT-------KSRERCLKSQGLVG---DRPVVLQLAGGFGVGPIAKIYQAVLSMPSPVELVVVCGKNAGAKEELAAIG--VPKQHRVKLLGFTDQMDELMAVADVVLSKPGGLTTSEVLARGAAMAIINPIPGQESRNSDYLLENGAAIKINNIGTLAYKLQSLLADRKRLASIRANALRISRPRAAFDVAEIAL 356
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A7Y5SNR6_9BACT (Glycosyltransferase n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SNR6_9BACT) HSP 1 Score: 142 bits (359), Expect = 1.020e-36 Identity = 94/246 (38.21%), Postives = 132/246 (53.66%), Query Frame = 1
Query: 13 IVTDFDTHATWMSSKCPSTVLFPRAFSAEQGRLLMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSGDDVVDVFT---ALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLK-PENLSRLKENAARLGYADAAFDVA 738
+ TDF+TH W++ C +AE L+ P + GIPI P+F P RA+ L + GL RP V+Q++ G V V ALL P + VV GR + A+L + + H + V+GFT+ + AADLV++KPGGLTT+E L+ G + I N IPGQESRN+D+LL GAA+K+ + L Y + ++L P L+ LK NA+RLG AAFD+A
Sbjct: 139 VTTDFETHRLWVNQPCDHYF----TATAEGAANLVHWGVPAAEVTVAGIPIHPAFSATKP---RAECLARQ-------GLSDDRPIVLQLAGGFGVGPVEKLCHALLDVEIPLQLAVVTGRNEELKARLEHI--QPPERHRLKVLGFTREMDELMTAADLVVTKPGGLTTSEALACGAALAIVNPIPGQESRNSDFLLENGAAIKINNTATLSYKVAQLLHDPSRLAELKRNASRLGRPRAAFDIA 368
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A848ZGM5_9DELT (UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZGM5_9DELT) HSP 1 Score: 142 bits (358), Expect = 1.460e-36 Identity = 94/247 (38.06%), Postives = 132/247 (53.44%), Query Frame = 1
Query: 13 IVTDFDTHATWMSSKCPSTVLFPRAFSAEQGRL-LMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVL-KPENLSRLKENAARLGYADAAFDVA 738
+ TD++TH W++ C +A G + +D T GIPI P+F E Q RA L GL R V+Q++ G + ++ LL P +V V GR + +L ++ E H V+GFT+ IH ADLV+SKPGGLTT+E+L+ G+ M I N +PGQE+RN+D+LL GAA+K+ ++ LPY L +L E L +LK+NAARL AAFDVA
Sbjct: 142 VTTDYETHRLWVTRPCEHYCTATEEGAAYLGHWGVNERDITVT-----GIPIHPAFSEH---QGRATCLQSQ-------GLVGDRTIVLQLAGGFGVGPIEKIYRGLLEIDVPLEIVSVAGRNEEIKRELEKI--EVPPQHRSKVIGFTEKIHELMVVADLVLSKPGGLTTSEVLASGSAMAIINPVPGQETRNSDFLLENGAAIKINNVATLPYKLTRLLGDKERLRQLKQNAARLARPQAAFDVA 371
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A7C5W6U8_9BACT (Glycosyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5W6U8_9BACT) HSP 1 Score: 141 bits (356), Expect = 3.270e-36 Identity = 104/259 (40.15%), Postives = 141/259 (54.44%), Query Frame = 1
Query: 13 IVTDFDTHATWMSSKCPSTVLFPRAFSAEQGRLLMRKDAPQTLSV-LRGIPIVPSFREVPPPQERAQALN-KALKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLKPEN-LSRLKENAARLGYADAAFDVAGMV--LAAAAG 765
I TDFDTH WM+ C E+G L +R + G+PI P F + P +RA + + + GD RP V+Q++ G V +F ALLS TP +VVV GR N AK A + H V V+GFT IH AAAD+V+SKPGGLT +E+L+ G + + N IPGQESRN+D+LL GAAVK+ ++ + LE +++ L ++ NA RLG AAF+VA + LAAA G
Sbjct: 140 ITTDFDTHRIWMAEPCEYYFT-----ENEEGALHLRCFGVSGERIKATGVPIHPVFSK---PLDRAACMAFQEIAGD--------RPVVLQLAGGFGLGPVEAMFNALLSIETPIELVVVAGR--NEKAKRSLEAVKPPHRHKVKVIGFTSRIHELMAAADIVVSKPGGLTVSEVLACGAALAVVNPIPGQESRNSDFLLENGAAVKINNVATAAHKLEALIRDRTRLENIRRNAKRLGRPMAAFEVARLAIDLAAACG 380
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: A0A354GPR6_9BACT (UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GPR6_9BACT) HSP 1 Score: 141 bits (356), Expect = 3.390e-36 Identity = 99/253 (39.13%), Postives = 132/253 (52.17%), Query Frame = 1
Query: 1 PPPAIVTDFDTHATWMSSKCPSTVLFPRAFSA--EQGRLLMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSGDDVVD----VFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLK-PENLSRLKENAARLGYADAAFDVA 738
P + TDFDTH W+ C F+A E R L P + G+PI P FR P+++A K GL RP V+QM+ G VV ++ ALL P +VV GR + A+L R+ H V+ FT I + AAADLV+SKPGGLT AE L+ G +++ +PGQESRN D+LL GAAVK+ L +L Y ++ +L P L+ L+ NA RL +AAFDVA
Sbjct: 144 PQVTVTTDFDTHRMWVHPPC------EHYFTATEEGSRYLQYWGVPVADVSVTGVPIHPVFRR---PKDKAACAAKH-------GLATDRPIVLQMAGGFGVVGPIEKLYAALLQTERPIELVVAAGRNGAIQARLERIPTPPR--HRARVLPFTTEIDEYMAAADLVVSKPGGLTVAETLARGAVLVMVQPVPGQESRNCDYLLENGAAVKVSALPLLAYKVDSLLADPARLAGLRANAVRLARPNAAFDVA 378
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Match: F7NDX9_9FIRM (UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Acetonema longum DSM 6540 TaxID=1009370 RepID=F7NDX9_9FIRM) HSP 1 Score: 140 bits (354), Expect = 5.280e-36 Identity = 95/247 (38.46%), Postives = 134/247 (54.25%), Query Frame = 1
Query: 13 IVTDFDTHATWMSSKCPSTVLFPRAFSA-EQGRL-LMRKDAPQTLSVLRGIPIVPSFREVPPPQERAQALNKALKGDGQPGLKPGRPTVVQMSSG---DDVVDVFTALLSATTPCNVVVVCGRQANVTAKLRRVADEAESPHCVSVVGFTKLIHLFFAAADLVISKPGGLTTAELLSMGTPMLIFNAIPGQESRNTDWLLAEGAAVKLQDLFMLPYVLEEVLK-PENLSRLKENAARLGYADAAFDV 735
+ TDFDTH W++ C R F+A E+G++ L P +L GIPI P F + P+ R + GL RP V+Q++ G + ++ +LL+ P V+VV GR V +L A H + GFT I AAAD+++SKPGGLTTAE L+ G M+I + IPGQESRN+D+LL GAAVK+ +L L Y + +L P L ++++NA R+ AAFDV
Sbjct: 140 VTTDFDTHRLWVNQPC------ERYFTAAEEGKINLTAWGVPVGDIILTGIPIHPVFAQ---PKSRQDCCQRQ-------GLSGDRPLVLQLAGGFGVGSIERIYQSLLTVEQPLEVMVVAGRNVKVRQQLETRA--CPPRHRTHIFGFTDQIDELMAAADIIVSKPGGLTTAETLARGAAMVIVDPIPGQESRNSDFLLENGAAVKVNNLSTLAYKVSSLLADPGRLRQIQDNACRIARPRAAFDV 368 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10342.487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10342.487.1 >prot_S-firma_F_contig10342.487.1 ID=prot_S-firma_F_contig10342.487.1|Name=mRNA_S-firma_F_contig10342.487.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=258bp PPPAIVTDFDTHATWMSSKCPSTVLFPRAFSAEQGRLLMRKDAPQTLSVLback to top mRNA from alignment at S-firma_F_contig10342:88..927+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10342.487.1 ID=mRNA_S-firma_F_contig10342.487.1|Name=mRNA_S-firma_F_contig10342.487.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=840bp|location=Sequence derived from alignment at S-firma_F_contig10342:88..927+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10342:88..927+ >mRNA_S-firma_F_contig10342.487.1 ID=mRNA_S-firma_F_contig10342.487.1|Name=mRNA_S-firma_F_contig10342.487.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1548bp|location=Sequence derived from alignment at S-firma_F_contig10342:88..927+ (Sphaerotrichia firma ET2_F female)back to top |