mRNA_S-firma_F_contig10309.456.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10309.456.1
Unique NamemRNA_S-firma_F_contig10309.456.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: UPI000644D8B8 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D8B8)

HSP 1 Score: 124 bits (311), Expect = 7.720e-29
Identity = 94/375 (25.07%), Postives = 176/375 (46.93%), Query Frame = 1
Query:    1 PSNANLQWVGRVLQVT---DQAYRMDFPGVQVTMVITGTTQLSVLIKGI-------------ATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNG--MSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVP-SNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTR--LMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            P++ N+Q+ GR+       + AY  D+PG+Q+T+VI GT+ +  +++                   ++ ++V+G     F     D +  Y+L +   +S+ QTY +TL+K +E A           V+  GF  D T+ L P P   +RR+LF+GD    G+  +           C+ +    +V   +G+ + + +EAD  ++ WSG G+  N D  D T   +  D+WTRTL +   +  +    + PD +++NLG +D   + +   +    + ++ N ++A +   +   +I L CGP    G    +Y  +V D +  ++    +    N+ +T    GCR  P    + N ++A    PI++ + +W
Sbjct:   16 PNSENIQYKGRIDTSNLNNEGAYYFDWPGIQITLVIKGTSSIKAVLQSKLALNDIGDLHYSKGNKNIFDIVVNGTFHSVFTISSYDPKMSYSLFDDGYLSSDQTYVVTLIKRTEAAF--------GRVSFFGFIVDSTYMLLPPPIPRSRRLLFLGDSITCGYGNM-------VIDPCEFSVETENVNFAYGSLIAKQLEADAYFIAWSGIGLSRNCDSPDTTSKVVFKDMWTRTLATNSSLQ-WEAGLYLPDAVIINLGTNDFITQPNPPRDI--FIEDYTNLVKAIHNIYSNKPKIFLACGPMI--GDPCCSYVQSVADSIDGVT----YIDMQNILVTANDIGCRGHP--GKTGNIKMANIACPIIQKVMEW 364          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A8J4PRC7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRC7_9MYCE)

HSP 1 Score: 92.0 bits (227), Expect = 1.220e-16
Identity = 76/290 (26.21%), Postives = 126/290 (43.45%), Query Frame = 1
Query:    1 PSNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGM--STTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRML-FIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTD--GTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLAN--YKTALTNFANTLRAQYVSLAPNVRILLTCGP 849
            PSN  + +VGRV +     Y + +PG+Q++++++GTT+ S +         + V +D  +  +   V       Y+    +    TQTY ITL+K +E              T  G   D   +L   P  + R + FIGD    G+  L GE        C        +  T+G  + R +EA      WSG+GV  N         + +P+++  T   T   D +    F PD +V+NLG +D D  A   +   ++    +F N ++++Y++   N    L CGP
Sbjct:  515 PSNEKINYVGRVDKSVSSQYGLAWPGIQISVLVSGTTRFSTVFASTG-QVYYNVYIDNVM--FVMNVSSPLPQPYSFSESLILDPTQTYNITLIKRTEAMT--------GISTFYGILVDDNSTLISYPKTSSRSIEFIGDSITCGYGIL-GE------APCPFQAAQEDISLTYGGIISRELEAQLYVESWSGKGVVKNFGSITIPSNQTLPELYPLT-NPTEYTDYWDFNDFLPDAVVINLGTNDYDGTAPFPSKKLFEHTYIDFINFIKSKYIN---NPLFFLVCGP 782          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: F1TH92_9FIRM (Cellulase n=1 Tax=Ruminiclostridium papyrosolvens DSM 2782 TaxID=588581 RepID=F1TH92_9FIRM)

HSP 1 Score: 88.6 bits (218), Expect = 9.210e-16
Identity = 90/325 (27.69%), Postives = 148/325 (45.54%), Query Frame = 1
Query:  100 TGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSL-SPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSD---HFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            TGT  +S  IK  + D  + VI+DG +      +   S +  TL +G+    T+T+ L++ +E     A   +  ++   GF   G   L +P+PS TRR+ FIGD    G+         G T     T    + Y  +GA   R ++AD   + WSG+G+  N  G D   LMP +++R L     +  +  +K+TP V+V+NLG +D    + +   + TA +NF   +R QY    P+  I    GP    G  +T     +  +V +  AS D   H     ++L +   G  +   P+   ++ +A  L   ++T   W
Sbjct:  140 TGTA-ISATIKS-SGDNWFNVIIDGVVKTPVN-IPSGSSSPITLASGLKDGITHTVELVRRTE-----AWIGEAQFL---GFNVTGGELLPAPLPS-TRRIEFIGDSITCGYGN------EGTTQYQSFTTKNENAYMAYGAITARLLKADPTTVCWSGKGLVQNYGG-DLNDLMPAVYSRVLPYNTTLT-WDSSKWTPQVVVINLGTNDFSTGSVDKTTFATAYSNFVTKIRGQY----PDAHIYCAAGPM-LSGDQLTKCKGAITSVVDQKKASGDSKIHLIEFPVQLESN--GYGEDWHPSVKTHELMANQLAETIKTDLGW 437          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A5P8E4W9_9BACT (Lipase n=1 Tax=Pseudoprevotella muciniphila TaxID=2133944 RepID=A0A5P8E4W9_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 3.030e-14
Identity = 93/364 (25.55%), Postives = 143/364 (39.29%), Query Frame = 1
Query:    1 PSNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKG------FAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDG--TRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLG--GCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            P N  L +VGRV      AY   +PGVQ+  V+ GT+ +S+  K    D +  V +D     Y   VGE S     L          T+    L +   R  ++     +T+K          +G  +        R++ FIG+           E      G+   +F   + Y+++ A  CR + A C  +  SG GVY N  G       ++P  +  T     G D +  ++FTPDV+ +NLG +D    + ++        NF  T+R  Y    PN +I+L  G    G     A   T +    E +          L  T   G  G      P+   +QQ+A  L P +R I +W
Sbjct:   28 PDNDKLVYVGRVCTANPSAYTWSYPGVQIHAVVEGTSTVSIRTKAKCGDFM--VEIDDREP-YKIKVGEGSGTGLNLAE--------TLVAKNLDKGQHRLTLTYVVEGLTLKPVFYGLLLEREGRLAEQLPQLPERKIEFIGNSITCSLGIEYPE-----PGNPKSSFANENQYYSYEAIACRELNAQCFVVARSGIGVYRNSGGKPAGDKDVLPAYYPYTHFQLGG-DRWDFSRFTPDVVCINLGTNDTSNPSYSVDLLAKGYDNFLKTIRGNY----PNAKIVLLTGTMRVGQR--LADMKTAQKRAIEWANQRGDNEIYRLDFTPADGSLGYGQYKHPSARQHQQMAKELVPFLRNIMNW 368          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A7X8GDQ1_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X8GDQ1_9BACT)

HSP 1 Score: 75.5 bits (184), Expect = 2.850e-11
Identity = 68/264 (25.76%), Postives = 113/264 (42.80%), Query Frame = 1
Query:    4 SNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSED--------PNYVTVKGFAADGTFSL-SPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSV----YHTWGAAVCRAMEADCQYLGWSGRGVYINRDG-TDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLA 753
            +++N+Q+ GR+           FPGV +    TGT+  ++L +                  YF  + ++ E +   ++              L+   P+G  S +           V  KGF  D   SL +P      R+ FIG+    G+   + +N            G +SV    Y  WGA   R ++A    + +SGRG+Y N DG T GT  +P I+ + +     V  +  T++ PD+IV+NLG +D  A+A++ A
Sbjct:   30 ADSNIQYFGRIDDANIDEIAFAFPGVSIKANFTGTSITAILSQN--------GXXXXXXXNYFTVIIDEQEPFVLAISPSQNEY-------NLAHNLPQGVHSVEIFKRTESFVGTVVFKGFYVDAGHSLVAPDALPNTRIEFIGNSITCGYGNESSQN--------PPKSGFTSVNENNYMAWGAIAARELQAQYSCVAYSGRGLYQNNDGSTAGT--LPKIYDQVIADNATVT-WDNTRYVPDIIVINLGTNDFSAEAASSA 267          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A7X7CGL0_9CLOT (Acetyl xylan esterase n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X7CGL0_9CLOT)

HSP 1 Score: 73.6 bits (179), Expect = 9.780e-11
Identity = 68/280 (24.29%), Postives = 117/280 (41.79%), Query Frame = 1
Query:  226 TLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSDHFA-FANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            TL +G+S  + + +TL K +E                 GF       L+P P   R++ FIGD     +     +     T   +++      Y ++ +  CRA+ AD   + +SG+GV  N  G     LMP ++ R +       DY  +K+TPDV+V+NLG +D    A   +++  A  +    +R+QY    P+  I  T GP    G  +T     +  +V   +++ D    F          G  +   P+   +Q++A  L   ++    W
Sbjct:  181 TLASGLSNGK-HNVTLFKRTEA--------QVGVTQFLGFDFGSGKLLAPPPEAERKIEFIGDSITCAYGNEGTDKSQPFTPPNENS------YMSYASITCRALNADQICVSYSGKGVVSNYGGNT-NELMPFLYPRIMPQESTTWDY--SKWTPDVVVINLGTNDFSVSAPGESSFVNAYKDLVKKVRSQY----PDAHIFCTMGPM-LWGDSITICRGYLNKVVDSYNSAGDKKVYFLEYPQQQESDGYGEDWHPSIKTHQKMADLLTSAIKEKLGW 437          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: UPI000931F8DD (GDSL-type esterase/lipase family protein n=1 Tax=Bacteroides ilei TaxID=1907658 RepID=UPI000931F8DD)

HSP 1 Score: 72.8 bits (177), Expect = 1.320e-10
Identity = 68/246 (27.64%), Postives = 108/246 (43.90%), Query Frame = 1
Query:  340 GFAADGTFSLSPVPSNT-RRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDG--TDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGG--TGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            GF  D    L+P P    RR+ FIG+    G+  +  EN          T+   + Y+T+ A   RA+ A    +  SG G+Y N +G  T     +P ++ +TL + P  +++  ++FTPDV+ +NLG +D  A   ++     A   F   LR  Y    P+ +I+L  G   +G     V    DTV D        ++ + F     T +LG    S  P+     ++A  L   +R I  W
Sbjct:  133 GFYLDKGRKLAPAPQLPGRRIEFIGNSITCGYG-VESENPRDPF-----TYETENHYYTYAALTARALNAQHLVVARSGIGIYRNYNGPVTGSPDCLPAMYEQTLFTDPS-EEWDHSRFTPDVVCINLGTNDTGAGKYDMRLLTDAYRQFLKRLRQHY----PHAKIVLLSGSMMRGRQLADVKKAMDTVAD-ERRKEGDTEIYRFDMSPQTGSLG-YGASYHPSRRQQMKMAAELTAYLRRITGW 365          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A534PSJ9_9DELT (Endo-1,4-beta-glucanase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PSJ9_9DELT)

HSP 1 Score: 71.2 bits (173), Expect = 4.390e-10
Identity = 97/374 (25.94%), Postives = 151/374 (40.37%), Query Frame = 1
Query:    1 PSNANLQWVGRVLQVTDQAYRMDFPGVQVTM--------VITGTTQLSVLIKGIATDALWGVIVDG---AILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPT-----DQGGTGVTAYCDTVEDIVTELSASSDH----FAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            P+++ L + GR    +  A R+++PG  + +        VI G   L +   G      + V VDG   A L   EG G      Y L +G+   + + I L K +E     A         + GF  D   SL PV +  RR+ FIGD   AGF       I G   +C  +    +   T+ A   +A+ A    +  SG GVY N  G+  +  + D++ RTL + P    +  +++TPDV+V+N+G SD  +       +  A       +R  Y    P+  I +  GP        G   +T     V D+  +L  + D       F N     T G C+  P    +  +Q+   L   +R    W
Sbjct:   27 PNSSELLFEGR-FDTSAGAPRLEWPGSAIWLRFNGTGARVILGEHSLELDEYGQQAHDWFEVTVDGHAAAPLKTTEGTGT-----YLLASGLPAGE-HQIVLRKRTEAFVGEA--------QLHGFDIDPGSSLLPVEAPGRRIEFIGDSIAAGFG------IDGAGPNCLFSAETENYSETYAALTAQALGAQHMVIAASGAGVYRNWGGST-SNTIGDLYGRTLPTDPSTR-WDFSRWTPDVVVINVGTSDFTSGDPGRDAFVGAYRKLVAQVRQNY----PSALIAIAVGPMLSDLWPAGARALTQGRSYVADLTAQLVQAGDTRIKLIEFPNQDHAGTFG-CKSHPSA--ATQRQMGEQLTAFLRQQLGW 370          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A839JWM0_9FIRM (GDSL family lipase n=2 Tax=Variimorphobacter saccharofermentans TaxID=2755051 RepID=A0A839JWM0_9FIRM)

HSP 1 Score: 67.8 bits (164), Expect = 5.830e-9
Identity = 72/293 (24.57%), Postives = 121/293 (41.30%), Query Frame = 1
Query:  223 YTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGIS--SVYHTWGAAVCRAMEADCQYLGWSGRGV---YINRDGTDGTR-LMPDIWTRTLGSTPGV------DDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTEL-SASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
            Y L  G  + QT  I L+K SE A           + ++    D      P    +RR+ FIG+    G+      N+        DTF  S  + +  + A   R +EAD Q + WSG G+   Y  ++  + T  LMP ++  T  +T  V      + ++  +F PD IV+NLG +D+ +   N+     A  N       +  +  P  +IL T G   Q        C+ +   V  + S   D+  F +  +     G      P+ + ++++A  L   ++TI +W
Sbjct:   89 YLLYEGAKS-QTTKIRLVKYSEAAF--------GKIGIRSIRIDSDQPPRPTKKKSRRIEFIGNSITCGYGNEGIWNV--------DTFQTSQENPWEAYAALTARKLEADYQLVCWSGIGIISNYTEQEVPNTTEWLMPQLYPYTDRATDQVLGNTEPEVWKNERFDPDCIVINLGTNDS-SYTKNINERVEAFGNRYYEFVREVRNKNPRSKILCTLGAMGQD------LCEAIRQQVERMNSEGDDNVHFMDFDVQREEDGIGTDWHPSKATHRKMAVKLTDKLKTIMNW 357          
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A4Q3FV03_9SPHI (Electron transporter RnfD n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3FV03_9SPHI)

HSP 1 Score: 63.9 bits (154), Expect = 1.090e-7
Identity = 92/367 (25.07%), Postives = 153/367 (41.69%), Query Frame = 1
Query:   16 LQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRML-FIGDQTVAGFSTLNGENIAGRTGDCDDTFG-ISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNF------ANTLRAQYVSLAPNVR-------ILLTCGPTD--QGGTGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLGGCRDSP-MPNWSDNQQIATNLEPIVRTIADW 1062
            + + GR    TD A  + +PG  V +  TGT   +VL K   T   + VI+DG + G      + S+  Y L   +S  + +T+ L K +E         D       GF      SL P     +R + F G+    G++T + +N        D + G   + Y ++ A   R  +A    +  SG GV ++        +MP+++ R L +T     +  TK+TPD++VLNL    NDA  +   ++      F      A T+   Y  L  N+R       I+   G  D  Q G+    Y   +E+ V +L+ S         ++ T     +D+P  P  ++ Q +A +L   ++    W
Sbjct:   32 ITYAGRTGFKTDAA-ELSWPGASVKINFTGTGMGAVL-KDQDTSNYYNVIIDGKVTGKIHP--DTSQKNYVLAENLSAGK-HTLELFKRTEW--------DKGKTWFYGFMPVKEASLLPASKLQKRKIEFYGNSITCGYATEDYKN--------DSSIGYFENNYVSYAAITARHFDAQYSCIAKSGIGVLVSWF----PLIMPEMYDR-LDATDSTSKWDFTKYTPDLVVLNL--FQNDAWITQKPDHPEFKHRFGTQPPAAETIVLTYKKLVQNIRSKYPKAQIICALGSMDATQKGSPWPGY---IEEAVKQLADS---------KIYTHFFPYKDTPGHPKVAEQQIMADDLIAFIKQKIKW 358          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
UPI000644D8B87.720e-2925.07hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8J4PRC7_9MYCE1.220e-1626.21Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
F1TH92_9FIRM9.210e-1627.69Cellulase n=1 Tax=Ruminiclostridium papyrosolvens ... [more]
A0A5P8E4W9_9BACT3.030e-1425.55Lipase n=1 Tax=Pseudoprevotella muciniphila TaxID=... [more]
A0A7X8GDQ1_9BACT2.850e-1125.76T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7X7CGL0_9CLOT9.780e-1124.29Acetyl xylan esterase n=1 Tax=Clostridiaceae bacte... [more]
UPI000931F8DD1.320e-1027.64GDSL-type esterase/lipase family protein n=1 Tax=B... [more]
A0A534PSJ9_9DELT4.390e-1025.94Endo-1,4-beta-glucanase n=1 Tax=Deltaproteobacteri... [more]
A0A839JWM0_9FIRM5.830e-924.57GDSL family lipase n=2 Tax=Variimorphobacter sacch... [more]
A0A4Q3FV03_9SPHI1.090e-725.07Electron transporter RnfD n=1 Tax=Sphingobacteriac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10309contigS-firma_F_contig10309:3351..4412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog5786.XP_003290646.1
PFAMsLipase_GDSL_2
Max annot lvl554915|Amoebozoa
Evalue1.18e-24
EggNOG OGs2CJ6Z@1|root,2S3T0@2759|Eukaryota,3X92X@554915|Amoebozoa
Hectar predicted targeting categoryother localisation
Exons1
Model size1062
Cds size1062
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815562.524941-CDS-S-firma_F_contig10309:3350..44121622815562.524941-CDS-S-firma_F_contig10309:3350..4412Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10309 3351..4412 -
1696949417.7150502-CDS-S-firma_F_contig10309:3350..44121696949417.7150502-CDS-S-firma_F_contig10309:3350..4412Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10309 3351..4412 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10309.456.1prot_S-firma_F_contig10309.456.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10309 3351..4412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10309.456.1

>prot_S-firma_F_contig10309.456.1 ID=prot_S-firma_F_contig10309.456.1|Name=mRNA_S-firma_F_contig10309.456.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=354bp
PSNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDA
LWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPR
GAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGE
NIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDG
TDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNL
ANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVED
IVTELSASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRT
IADW
back to top

mRNA from alignment at S-firma_F_contig10309:3351..4412-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10309.456.1 ID=mRNA_S-firma_F_contig10309.456.1|Name=mRNA_S-firma_F_contig10309.456.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1062bp|location=Sequence derived from alignment at S-firma_F_contig10309:3351..4412- (Sphaerotrichia firma ET2_F female)
CCCAGCAACGCCAACCTGCAGTGGGTGGGGCGCGTCCTCCAGGTCACGGA CCAGGCGTACCGCATGGACTTCCCCGGCGTGCAGGTGACGATGGTCATCA CGGGCACCACCCAGCTGTCCGTCCTCATCAAGGGCATCGCGACGGACGCG CTGTGGGGCGTCATCGTGGACGGCGCCATCCTCGGCTACTTTGAGGGCGT CGGCGAAGACTCCGAGGCCTGGTACACCCTCCTCAACGGCATGTCCACCA CCCAGACGTACACCATCACCCTCATGAAGTTGTCCGAGGTGGCCCCCCGC GGTGCCGTCTCTGAGGACCCCAACTACGTCACCGTCAAGGGCTTCGCCGC CGACGGCACCTTCTCCCTCTCCCCCGTCCCCTCCAACACCCGCCGCATGC TCTTCATCGGGGACCAAACCGTCGCCGGCTTCAGCACCCTCAACGGCGAA AATATTGCCGGCCGCACCGGCGACTGCGACGACACCTTTGGCATCTCCAG CGTGTACCACACCTGGGGTGCCGCCGTGTGCCGCGCCATGGAGGCCGACT GCCAGTACCTGGGCTGGTCCGGCCGCGGCGTGTACATCAACCGCGACGGC ACCGACGGCACCCGGCTCATGCCCGACATCTGGACGCGCACCCTGGGGAG CACCCCCGGCGTCGACGACTACCGCCAGACCAAGTTCACGCCCGACGTCA TCGTCCTCAACCTCGGCTGGTCCGACAACGACGCCAAGGCCAGCAACCTG GCCAACTACAAGACCGCCCTCACCAACTTTGCCAACACCCTCCGCGCCCA GTACGTCTCCCTGGCCCCCAACGTCCGCATCCTGCTGACGTGCGGCCCCA CGGACCAGGGCGGCACCGGCGTCACGGCGTACTGTGACACGGTGGAGGAC ATTGTGACAGAGCTCAGCGCCTCCTCCGACCACTTCGCCTTTGCCAACCT GCGGCTGACGACCACCCTGGGCGGCTGCCGGGACTCCCCCATGCCCAACT GGAGCGACAACCAGCAGATTGCCACCAACCTGGAGCCCATCGTCCGCACC ATCGCCGACTGG
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig10309:3351..4412-

>mRNA_S-firma_F_contig10309.456.1 ID=mRNA_S-firma_F_contig10309.456.1|Name=mRNA_S-firma_F_contig10309.456.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2124bp|location=Sequence derived from alignment at S-firma_F_contig10309:3351..4412- (Sphaerotrichia firma ET2_F female)
CCCAGCAACGCCAACCTGCAGTGGGTGGGGCGCGTCCTCCAGGTCACGGA
CCAGGCGTACCGCATGGACTTCCCCGGCGTGCAGGTGACGATGGTCATCA
CGGGCACCACCCAGCTGTCCGTCCTCATCAAGGGCATCGCGACGGACGCG
CTGTGGGGCGTCATCGTGGACGGCGCCATCCTCGGCTACTTTGAGGGCGT
CGGCGAAGACTCCGAGGCCTGGTACACCCTCCTCAACGGCATGTCCACCA
CCCAGACGTACACCATCACCCTCATGAAGTTGTCCGAGGTGGCCCCCCGC
GGTGCCGTCTCTGAGGACCCCAACTACGTCACCGTCAAGGGCTTCGCCGC
CGACGGCACCTTCTCCCTCTCCCCCGTCCCCTCCAACACCCGCCGCATGC
TCTTCATCGGGGACCAAACCGTCGCCGGCTTCAGCACCCTCAACGGCGAA
AATATTGCCGGCCGCACCGGCGACTGCGACGACACCTTTGGCATCTCCAG
CGTGTACCACACCTGGGGTGCCGCCGTGTGCCGCGCCATGGAGGCCGACT
GCCAGTACCTGGGCTGGTCCGGCCGCGGCGTGTACATCAACCGCGACGGC
ACCGACGGCACCCGGCTCATGCCCGACATCTGGACGCGCACCCTGGGGAG
CACCCCCGGCGTCGACGACTACCGCCAGACCAAGTTCACGCCCGACGTCA
TCGTCCTCAACCTCGGCTGGTCCGACAACGACGCCAAGGCCAGCAACCTG
GCCAACTACAAGACCGCCCTCACCAACTTTGCCAACACCCTCCGCGCCCA
GTACGTCTCCCTGGCCCCCAACGTCCGCATCCTGCTGACGTGCGGCCCCA
CGGACCAGGGCGGCACCGGCGTCACGGCGTACTGTGACACGGTGGAGGAC
ATTGTGACAGAGCTCAGCGCCTCCTCCGACCACTTCGCCTTTGCCAACCT
GCGGCTGACGACCACCCTGGGCGGCTGCCGGGACTCCCCCATGCCCAACT
GGAGCGACAACCAGCAGATTGCCACCAACCTGGAGCCCATCGTCCGCACC
ATCGCCGACTGGCCCAGCAACGCCAACCTGCAGTGGGTGGGGCGCGTCCT
CCAGGTCACGGACCAGGCGTACCGCATGGACTTCCCCGGCGTGCAGGTGA
CGATGGTCATCACGGGCACCACCCAGCTGTCCGTCCTCATCAAGGGCATC
GCGACGGACGCGCTGTGGGGCGTCATCGTGGACGGCGCCATCCTCGGCTA
CTTTGAGGGCGTCGGCGAAGACTCCGAGGCCTGGTACACCCTCCTCAACG
GCATGTCCACCACCCAGACGTACACCATCACCCTCATGAAGTTGTCCGAG
GTGGCCCCCCGCGGTGCCGTCTCTGAGGACCCCAACTACGTCACCGTCAA
GGGCTTCGCCGCCGACGGCACCTTCTCCCTCTCCCCCGTCCCCTCCAACA
CCCGCCGCATGCTCTTCATCGGGGACCAAACCGTCGCCGGCTTCAGCACC
CTCAACGGCGAAAATATTGCCGGCCGCACCGGCGACTGCGACGACACCTT
TGGCATCTCCAGCGTGTACCACACCTGGGGTGCCGCCGTGTGCCGCGCCA
TGGAGGCCGACTGCCAGTACCTGGGCTGGTCCGGCCGCGGCGTGTACATC
AACCGCGACGGCACCGACGGCACCCGGCTCATGCCCGACATCTGGACGCG
CACCCTGGGGAGCACCCCCGGCGTCGACGACTACCGCCAGACCAAGTTCA
CGCCCGACGTCATCGTCCTCAACCTCGGCTGGTCCGACAACGACGCCAAG
GCCAGCAACCTGGCCAACTACAAGACCGCCCTCACCAACTTTGCCAACAC
CCTCCGCGCCCAGTACGTCTCCCTGGCCCCCAACGTCCGCATCCTGCTGA
CGTGCGGCCCCACGGACCAGGGCGGCACCGGCGTCACGGCGTACTGTGAC
ACGGTGGAGGACATTGTGACAGAGCTCAGCGCCTCCTCCGACCACTTCGC
CTTTGCCAACCTGCGGCTGACGACCACCCTGGGCGGCTGCCGGGACTCCC
CCATGCCCAACTGGAGCGACAACCAGCAGATTGCCACCAACCTGGAGCCC
ATCGTCCGCACCATCGCCGACTGG
back to top