mRNA_S-firma_F_contig10309.456.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: UPI000644D8B8 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D8B8) HSP 1 Score: 124 bits (311), Expect = 7.720e-29 Identity = 94/375 (25.07%), Postives = 176/375 (46.93%), Query Frame = 1
Query: 1 PSNANLQWVGRVLQVT---DQAYRMDFPGVQVTMVITGTTQLSVLIKGI-------------ATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNG--MSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVP-SNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTR--LMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
P++ N+Q+ GR+ + AY D+PG+Q+T+VI GT+ + +++ ++ ++V+G F D + Y+L + +S+ QTY +TL+K +E A V+ GF D T+ L P P +RR+LF+GD G+ + C+ + +V +G+ + + +EAD ++ WSG G+ N D D T + D+WTRTL + + + + PD +++NLG +D + + + + ++ N ++A + + +I L CGP G +Y +V D + ++ + N+ +T GCR P + N ++A PI++ + +W
Sbjct: 16 PNSENIQYKGRIDTSNLNNEGAYYFDWPGIQITLVIKGTSSIKAVLQSKLALNDIGDLHYSKGNKNIFDIVVNGTFHSVFTISSYDPKMSYSLFDDGYLSSDQTYVVTLIKRTEAAF--------GRVSFFGFIVDSTYMLLPPPIPRSRRLLFLGDSITCGYGNM-------VIDPCEFSVETENVNFAYGSLIAKQLEADAYFIAWSGIGLSRNCDSPDTTSKVVFKDMWTRTLATNSSLQ-WEAGLYLPDAVIINLGTNDFITQPNPPRDI--FIEDYTNLVKAIHNIYSNKPKIFLACGPMI--GDPCCSYVQSVADSIDGVT----YIDMQNILVTANDIGCRGHP--GKTGNIKMANIACPIIQKVMEW 364
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A8J4PRC7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRC7_9MYCE) HSP 1 Score: 92.0 bits (227), Expect = 1.220e-16 Identity = 76/290 (26.21%), Postives = 126/290 (43.45%), Query Frame = 1
Query: 1 PSNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGM--STTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRML-FIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTD--GTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLAN--YKTALTNFANTLRAQYVSLAPNVRILLTCGP 849
PSN + +VGRV + Y + +PG+Q++++++GTT+ S + + V +D + + V Y+ + TQTY ITL+K +E T G D +L P + R + FIGD G+ L GE C + T+G + R +EA WSG+GV N + +P+++ T T D + F PD +V+NLG +D D A + ++ +F N ++++Y++ N L CGP
Sbjct: 515 PSNEKINYVGRVDKSVSSQYGLAWPGIQISVLVSGTTRFSTVFASTG-QVYYNVYIDNVM--FVMNVSSPLPQPYSFSESLILDPTQTYNITLIKRTEAMT--------GISTFYGILVDDNSTLISYPKTSSRSIEFIGDSITCGYGIL-GE------APCPFQAAQEDISLTYGGIISRELEAQLYVESWSGKGVVKNFGSITIPSNQTLPELYPLT-NPTEYTDYWDFNDFLPDAVVINLGTNDYDGTAPFPSKKLFEHTYIDFINFIKSKYIN---NPLFFLVCGP 782
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: F1TH92_9FIRM (Cellulase n=1 Tax=Ruminiclostridium papyrosolvens DSM 2782 TaxID=588581 RepID=F1TH92_9FIRM) HSP 1 Score: 88.6 bits (218), Expect = 9.210e-16 Identity = 90/325 (27.69%), Postives = 148/325 (45.54%), Query Frame = 1
Query: 100 TGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSL-SPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSD---HFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
TGT +S IK + D + VI+DG + + S + TL +G+ T+T+ L++ +E A + ++ GF G L +P+PS TRR+ FIGD G+ G T T + Y +GA R ++AD + WSG+G+ N G D LMP +++R L + + +K+TP V+V+NLG +D + + + TA +NF +R QY P+ I GP G +T + +V + AS D H ++L + G + P+ ++ +A L ++T W
Sbjct: 140 TGTA-ISATIKS-SGDNWFNVIIDGVVKTPVN-IPSGSSSPITLASGLKDGITHTVELVRRTE-----AWIGEAQFL---GFNVTGGELLPAPLPS-TRRIEFIGDSITCGYGN------EGTTQYQSFTTKNENAYMAYGAITARLLKADPTTVCWSGKGLVQNYGG-DLNDLMPAVYSRVLPYNTTLT-WDSSKWTPQVVVINLGTNDFSTGSVDKTTFATAYSNFVTKIRGQY----PDAHIYCAAGPM-LSGDQLTKCKGAITSVVDQKKASGDSKIHLIEFPVQLESN--GYGEDWHPSVKTHELMANQLAETIKTDLGW 437
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A5P8E4W9_9BACT (Lipase n=1 Tax=Pseudoprevotella muciniphila TaxID=2133944 RepID=A0A5P8E4W9_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 3.030e-14 Identity = 93/364 (25.55%), Postives = 143/364 (39.29%), Query Frame = 1
Query: 1 PSNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKG------FAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDG--TRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLG--GCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
P N L +VGRV AY +PGVQ+ V+ GT+ +S+ K D + V +D Y VGE S L T+ L + R ++ +T+K +G + R++ FIG+ E G+ +F + Y+++ A CR + A C + SG GVY N G ++P + T G D + ++FTPDV+ +NLG +D + ++ NF T+R Y PN +I+L G G A T + E + L T G G P+ +QQ+A L P +R I +W
Sbjct: 28 PDNDKLVYVGRVCTANPSAYTWSYPGVQIHAVVEGTSTVSIRTKAKCGDFM--VEIDDREP-YKIKVGEGSGTGLNLAE--------TLVAKNLDKGQHRLTLTYVVEGLTLKPVFYGLLLEREGRLAEQLPQLPERKIEFIGNSITCSLGIEYPE-----PGNPKSSFANENQYYSYEAIACRELNAQCFVVARSGIGVYRNSGGKPAGDKDVLPAYYPYTHFQLGG-DRWDFSRFTPDVVCINLGTNDTSNPSYSVDLLAKGYDNFLKTIRGNY----PNAKIVLLTGTMRVGQR--LADMKTAQKRAIEWANQRGDNEIYRLDFTPADGSLGYGQYKHPSARQHQQMAKELVPFLRNIMNW 368
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A7X8GDQ1_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X8GDQ1_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 2.850e-11 Identity = 68/264 (25.76%), Postives = 113/264 (42.80%), Query Frame = 1
Query: 4 SNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSED--------PNYVTVKGFAADGTFSL-SPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSV----YHTWGAAVCRAMEADCQYLGWSGRGVYINRDG-TDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLA 753
+++N+Q+ GR+ FPGV + TGT+ ++L + YF + ++ E + ++ L+ P+G S + V KGF D SL +P R+ FIG+ G+ + +N G +SV Y WGA R ++A + +SGRG+Y N DG T GT +P I+ + + V + T++ PD+IV+NLG +D A+A++ A
Sbjct: 30 ADSNIQYFGRIDDANIDEIAFAFPGVSIKANFTGTSITAILSQN--------GXXXXXXXNYFTVIIDEQEPFVLAISPSQNEY-------NLAHNLPQGVHSVEIFKRTESFVGTVVFKGFYVDAGHSLVAPDALPNTRIEFIGNSITCGYGNESSQN--------PPKSGFTSVNENNYMAWGAIAARELQAQYSCVAYSGRGLYQNNDGSTAGT--LPKIYDQVIADNATVT-WDNTRYVPDIIVINLGTNDFSAEAASSA 267
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A7X7CGL0_9CLOT (Acetyl xylan esterase n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X7CGL0_9CLOT) HSP 1 Score: 73.6 bits (179), Expect = 9.780e-11 Identity = 68/280 (24.29%), Postives = 117/280 (41.79%), Query Frame = 1
Query: 226 TLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTELSASSDHFA-FANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
TL +G+S + + +TL K +E GF L+P P R++ FIGD + + T +++ Y ++ + CRA+ AD + +SG+GV N G LMP ++ R + DY +K+TPDV+V+NLG +D A +++ A + +R+QY P+ I T GP G +T + +V +++ D F G + P+ +Q++A L ++ W
Sbjct: 181 TLASGLSNGK-HNVTLFKRTEA--------QVGVTQFLGFDFGSGKLLAPPPEAERKIEFIGDSITCAYGNEGTDKSQPFTPPNENS------YMSYASITCRALNADQICVSYSGKGVVSNYGGNT-NELMPFLYPRIMPQESTTWDY--SKWTPDVVVINLGTNDFSVSAPGESSFVNAYKDLVKKVRSQY----PDAHIFCTMGPM-LWGDSITICRGYLNKVVDSYNSAGDKKVYFLEYPQQQESDGYGEDWHPSIKTHQKMADLLTSAIKEKLGW 437
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: UPI000931F8DD (GDSL-type esterase/lipase family protein n=1 Tax=Bacteroides ilei TaxID=1907658 RepID=UPI000931F8DD) HSP 1 Score: 72.8 bits (177), Expect = 1.320e-10 Identity = 68/246 (27.64%), Postives = 108/246 (43.90%), Query Frame = 1
Query: 340 GFAADGTFSLSPVPSNT-RRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDG--TDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGG--TGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
GF D L+P P RR+ FIG+ G+ + EN T+ + Y+T+ A RA+ A + SG G+Y N +G T +P ++ +TL + P +++ ++FTPDV+ +NLG +D A ++ A F LR Y P+ +I+L G +G V DTV D ++ + F T +LG S P+ ++A L +R I W
Sbjct: 133 GFYLDKGRKLAPAPQLPGRRIEFIGNSITCGYG-VESENPRDPF-----TYETENHYYTYAALTARALNAQHLVVARSGIGIYRNYNGPVTGSPDCLPAMYEQTLFTDPS-EEWDHSRFTPDVVCINLGTNDTGAGKYDMRLLTDAYRQFLKRLRQHY----PHAKIVLLSGSMMRGRQLADVKKAMDTVAD-ERRKEGDTEIYRFDMSPQTGSLG-YGASYHPSRRQQMKMAAELTAYLRRITGW 365
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A534PSJ9_9DELT (Endo-1,4-beta-glucanase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PSJ9_9DELT) HSP 1 Score: 71.2 bits (173), Expect = 4.390e-10 Identity = 97/374 (25.94%), Postives = 151/374 (40.37%), Query Frame = 1
Query: 1 PSNANLQWVGRVLQVTDQAYRMDFPGVQVTM--------VITGTTQLSVLIKGIATDALWGVIVDG---AILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPT-----DQGGTGVTAYCDTVEDIVTELSASSDH----FAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
P+++ L + GR + A R+++PG + + VI G L + G + V VDG A L EG G Y L +G+ + + I L K +E A + GF D SL PV + RR+ FIGD AGF I G +C + + T+ A +A+ A + SG GVY N G+ + + D++ RTL + P + +++TPDV+V+N+G SD + + A +R Y P+ I + GP G +T V D+ +L + D F N T G C+ P + +Q+ L +R W
Sbjct: 27 PNSSELLFEGR-FDTSAGAPRLEWPGSAIWLRFNGTGARVILGEHSLELDEYGQQAHDWFEVTVDGHAAAPLKTTEGTGT-----YLLASGLPAGE-HQIVLRKRTEAFVGEA--------QLHGFDIDPGSSLLPVEAPGRRIEFIGDSIAAGFG------IDGAGPNCLFSAETENYSETYAALTAQALGAQHMVIAASGAGVYRNWGGST-SNTIGDLYGRTLPTDPSTR-WDFSRWTPDVVVINVGTSDFTSGDPGRDAFVGAYRKLVAQVRQNY----PSALIAIAVGPMLSDLWPAGARALTQGRSYVADLTAQLVQAGDTRIKLIEFPNQDHAGTFG-CKSHPSA--ATQRQMGEQLTAFLRQQLGW 370
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A839JWM0_9FIRM (GDSL family lipase n=2 Tax=Variimorphobacter saccharofermentans TaxID=2755051 RepID=A0A839JWM0_9FIRM) HSP 1 Score: 67.8 bits (164), Expect = 5.830e-9 Identity = 72/293 (24.57%), Postives = 121/293 (41.30%), Query Frame = 1
Query: 223 YTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRMLFIGDQTVAGFSTLNGENIAGRTGDCDDTFGIS--SVYHTWGAAVCRAMEADCQYLGWSGRGV---YINRDGTDGTR-LMPDIWTRTLGSTPGV------DDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNFANTLRAQYVSLAPNVRILLTCGPTDQGGTGVTAYCDTVEDIVTEL-SASSDHFAFANLRLTTTLGGCRDSPMPNWSDNQQIATNLEPIVRTIADW 1062
Y L G + QT I L+K SE A + ++ D P +RR+ FIG+ G+ N+ DTF S + + + A R +EAD Q + WSG G+ Y ++ + T LMP ++ T +T V + ++ +F PD IV+NLG +D+ + N+ A N + + P +IL T G Q C+ + V + S D+ F + + G P+ + ++++A L ++TI +W
Sbjct: 89 YLLYEGAKS-QTTKIRLVKYSEAAF--------GKIGIRSIRIDSDQPPRPTKKKSRRIEFIGNSITCGYGNEGIWNV--------DTFQTSQENPWEAYAALTARKLEADYQLVCWSGIGIISNYTEQEVPNTTEWLMPQLYPYTDRATDQVLGNTEPEVWKNERFDPDCIVINLGTNDS-SYTKNINERVEAFGNRYYEFVREVRNKNPRSKILCTLGAMGQD------LCEAIRQQVERMNSEGDDNVHFMDFDVQREEDGIGTDWHPSKATHRKMAVKLTDKLKTIMNW 357
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Match: A0A4Q3FV03_9SPHI (Electron transporter RnfD n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3FV03_9SPHI) HSP 1 Score: 63.9 bits (154), Expect = 1.090e-7 Identity = 92/367 (25.07%), Postives = 153/367 (41.69%), Query Frame = 1
Query: 16 LQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDALWGVIVDGAILGYFEGVGEDSEAWYTLLNGMSTTQTYTITLMKLSEVAPRGAVSEDPNYVTVKGFAADGTFSLSPVPSNTRRML-FIGDQTVAGFSTLNGENIAGRTGDCDDTFG-ISSVYHTWGAAVCRAMEADCQYLGWSGRGVYINRDGTDGTRLMPDIWTRTLGSTPGVDDYRQTKFTPDVIVLNLGWSDNDAKASNLANYKTALTNF------ANTLRAQYVSLAPNVR-------ILLTCGPTD--QGGTGVTAYCDTVEDIVTELSASSDHFAFANLRLTTTLGGCRDSP-MPNWSDNQQIATNLEPIVRTIADW 1062
+ + GR TD A + +PG V + TGT +VL K T + VI+DG + G + S+ Y L +S + +T+ L K +E D GF SL P +R + F G+ G++T + +N D + G + Y ++ A R +A + SG GV ++ +MP+++ R L +T + TK+TPD++VLNL NDA + ++ F A T+ Y L N+R I+ G D Q G+ Y +E+ V +L+ S ++ T +D+P P ++ Q +A +L ++ W
Sbjct: 32 ITYAGRTGFKTDAA-ELSWPGASVKINFTGTGMGAVL-KDQDTSNYYNVIIDGKVTGKIHP--DTSQKNYVLAENLSAGK-HTLELFKRTEW--------DKGKTWFYGFMPVKEASLLPASKLQKRKIEFYGNSITCGYATEDYKN--------DSSIGYFENNYVSYAAITARHFDAQYSCIAKSGIGVLVSWF----PLIMPEMYDR-LDATDSTSKWDFTKYTPDLVVLNL--FQNDAWITQKPDHPEFKHRFGTQPPAAETIVLTYKKLVQNIRSKYPKAQIICALGSMDATQKGSPWPGY---IEEAVKQLADS---------KIYTHFFPYKDTPGHPKVAEQQIMADDLIAFIKQKIKW 358 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10309.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10309.456.1 >prot_S-firma_F_contig10309.456.1 ID=prot_S-firma_F_contig10309.456.1|Name=mRNA_S-firma_F_contig10309.456.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=354bp PSNANLQWVGRVLQVTDQAYRMDFPGVQVTMVITGTTQLSVLIKGIATDAback to top mRNA from alignment at S-firma_F_contig10309:3351..4412- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10309.456.1 ID=mRNA_S-firma_F_contig10309.456.1|Name=mRNA_S-firma_F_contig10309.456.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1062bp|location=Sequence derived from alignment at S-firma_F_contig10309:3351..4412- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10309:3351..4412- >mRNA_S-firma_F_contig10309.456.1 ID=mRNA_S-firma_F_contig10309.456.1|Name=mRNA_S-firma_F_contig10309.456.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2124bp|location=Sequence derived from alignment at S-firma_F_contig10309:3351..4412- (Sphaerotrichia firma ET2_F female)back to top |