mRNA_S-firma_F_contig1030.448.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1030.448.1
Unique NamemRNA_S-firma_F_contig1030.448.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI)

HSP 1 Score: 533 bits (1373), Expect = 5.680e-190
Identity = 258/314 (82.17%), Postives = 279/314 (88.85%), Query Frame = 1
Query:    1 MGKGVAYENGVPPPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQG---RGG---GEIAFKREFQRLDAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAALGLIL 924
            MG+GVAYENGV   P TM+TC+SEAFSNV RGDY +PDRRGVSAKHFSAKPQDRSKPFLHDS+YEHDFRNF+DEVDGLD G   RGG   GE AFKREF RLDAGNGVVHIRDMP+LIQG LGRDVRPWI DRILKMFEA RDGK++W DLQDGLRKV ES   DVS+KEREMPEWLV+NRKV P V HGQVTESC+QMDMGKDG+IPR+RR+WYKTGMSSTTLDLF+GTTK+TYQVPGYGGFIPASKMN RAREHGDMK +R   LDLRLFYRHN PGYTGHAP AA NDPGP+ CGS+PLTTSGAAALG+IL
Sbjct:    1 MGRGVAYENGVALAPPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENAFKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVMPAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.240e-65
Identity = 129/340 (37.94%), Postives = 184/340 (54.12%), Query Frame = 1
Query:    1 MGKGVAYENGVP-PPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQ-------------------------GRGGGEIAFKREFQRLDAGNG-----VVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKERE-MPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAALGLIL 924
            +G GV Y  G P    AT+ T ++E+ S+V + D+  P +RG  A   +A    R+KPFLH ++++  +R+   E++G                            G  G                G      + +  +P L+     +  R W+ DR+ K  E +R G++ W      L +V+ + S D S   R  MPEW++ +RK  PT++HG+   SC+Q D+G  G  P  R++ +K GM  TT DLF+GTTK T+ VPGYGGFIPASK+N RA +HGDM+ AR  + +LRLF++HN  GYTGH   AA ND G   CG++P TTSGAAALGL+L
Sbjct:   46 VGHGVQYNEGPPIDEHATIKTVSAESTSHVTKQDFRPPGKRGCQAATAAAAVA-RTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAHPTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.290e-46
Identity = 112/304 (36.84%), Postives = 153/304 (50.33%), Query Frame = 1
Query:    1 MGKGVAYENGVPPPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNF-ADEVDGLDQGRGGGEIAFKREFQRLDAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAA 909
            +G G+ Y   +P  P    T T  A + V    YS PDRRGVSA  F    +   K F+  +VY  DF +  AD V   D  R     AF++ F     G G +    +P+++  ALG      I+ +    F  +R G +SW D +  L +++E+   + S     +PEWLV + K  P V  G   +SC+Q DMG   + P+ +   YK GM ST+ DL  GTTK TY +PGY GFIP S+ N  A    + K+ R     +    +    GYTGH P+   ND GP  CG NPLTT+GA A
Sbjct:   34 VGTGLVYSAPLPTRPKWGETITKAATTLVRPRLYSAPDRRGVSAL-FEESNKALPKRFMGSTVYRSDFIDLRADLVKLQDACRS--PAAFQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPIPKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGA 333          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.420e-35
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 1
Query:  499 MPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAALGLIL 924
            +PEW+ +++ +   V   Q   S +Q DMG   + P +R    KTGM+ TT DL  GTTK+TY +PG+ G IP ++ N R   HGD +K       LRL++RHN PGYTG  PT A+ND G  H G+NP T+SGA+ALGL +
Sbjct:  120 VPEWVTASKAITEDVVPRQPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASALGLYV 261          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A485KW59_9STRA (Aste57867_12656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW59_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.520e-33
Identity = 97/285 (34.04%), Postives = 138/285 (48.42%), Query Frame = 1
Query:   76 FSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEI---AFKREFQRL------DAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
            F  VA+ DY  P R    A   +      S+ FL  S+Y+ DF NF D      QGR   EI   A++  F  L      + G+  +   D+  L++   G+     + D    MF+   DG +SW   Q+ + ++      +          WL   + V P         S HQ+D G  G  P  R    +T GM+STT DLFDGTTK+T+ +P Y GFIP +K N  A   GD ++ R +A DLRL++ +N PGYTGH P  ++N  G A  G++  TT+G
Sbjct:   62 FGLVAKQDYLHPTRSSKDAVEIAG-----SRTFLGQSLYQSDFLNFQD------QGRRIAEIPLEAYEAAFDDLAQGTNQEGGSKKIARDDVKHLLRKVYGKAPTSRVLDIYTHMFDTCPDGFVSWEIFQEAVLRLSSFLLHETVKTTPGQAGWLDFVQHVIPNG----TPSSSHQVDFGVYGSEPIGRPYVSRTHGMASTTSDLFDGTTKATFHIPRYQGFIPQTKFNPTAVVQGDAERGRTKAEDLRLYHLNNVPGYTGHKPVDSKNVRGEAKTGTDIRTTNG 331          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A6G0XRS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRS2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.390e-30
Identity = 95/304 (31.25%), Postives = 143/304 (47.04%), Query Frame = 1
Query:   49 TMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEI---AFKREFQRL------DAGNGVVHIR--DMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDG--------LRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
            +    T   +  V   D+S P R        +      S+ FL  S+Y+ DF NF +E      G+   E+   AF+  F  L      ++ + V  I   D+  L+Q   G+     I +    MF+   DG ++W   Q+         L + ++ +S  +         W+   +KV P         S HQ+D G  G  P  R    ++ GM+STT DLFDG+TK++Y +P Y GFIP +K N  A   G+ +K RP+A DLRL++ +N PGYTGH P  ++N  G A  G +  TT+G
Sbjct:   52 SFEALTRNHYGQVTPQDFSNPVRAAKDNGEIA-----HSRTFLGQSLYQRDFANFHEE------GKRIAELSMEAFQAAFDSLAEEPNQESPDAVKKINRDDVGELLQAVYGKPPATRILEIYAHMFDVCPDGFVTWEVFQEATLRLSSFLLHQTIKPSSHSIG--------WVDFVKKVLPNG----TPSSSHQIDYGTYGSDPLARPYMNRSHGMASTTSDLFDGSTKASYHIPRYQGFIPHTKCNPTAVSQGECEKPRPKAEDLRLYHSNNIPGYTGHKPVDSKNVRGEAKTGCDVRTTNG 332          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA)

HSP 1 Score: 125 bits (314), Expect = 5.770e-30
Identity = 97/289 (33.56%), Postives = 144/289 (49.83%), Query Frame = 1
Query:   76 FSNVARGDYSIPDR-----RGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEIA---FKREFQRL-DAGNGVVHI-RDMPR-LIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWL--VSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
            F +V R D+ +  +     RG    H         K FL  S+YE DF +F +      QG+   E+    +KR F  L +AG     + RD+ + L+    G      + D    MF+   DG I+W   ++ L ++    S + + K    P W+  +S R++ P    G +  S HQ+D G  G  P  R    +T GM+STT DL DGTTK+T+ +P YGGF+P +  N  A   GD  + R +  DLRL++ +N PGYTGH P  ++N  G A  G++  TT+G
Sbjct:   52 FGSVYRADFGLVTKADYVSRGPKESHNDVVA---GKKFLGQSLYETDFVHFQN------QGKALLEMPREEYKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALERLTLFVS-NATSKLHGKPSWMEYLSLRRLLP----GTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNG 326          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A024U6R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6R1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.950e-29
Identity = 94/303 (31.02%), Postives = 138/303 (45.54%), Query Frame = 1
Query:   49 TMSTCTSEAFSNVARGDYSIPDR---RGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADE---VDGLDQGRGGGEIAFKREFQRL------------DAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
            +    T   +  V + D+  P R   RG    +        S+ FL  ++Y+HDF NF +E   +  L         A+   F  L            D     +   D+  ++    G+     I D    MF+A  DG ISW   Q+ + ++  S  +  + K      WL         V HG    S HQ+D G  G  P  R    +T GM+STT D+FDGT+K+T+ +P Y GFIP +K N  A   GD +  R ++ DLRL++ +N PGYTGH P  ++N  G A  G++  TT+G
Sbjct:   55 SFEAVTRGHYGQVTKHDFETPTRPVSRGAEIAN--------SRTFLGQTLYQHDFLNFHEEGRRIAALPM------AAYAAAFDELTHVPNQDSTSDADPKQKKIARDDVKAVLCAVYGKPPTARILDIYAHMFDACPDGFISWEIFQEAVCRL-SSLLLHQTVKVSGQAGWL--EFVAAKHVLHGGTPASSHQIDFGTYGGNPLARPYVGRTNGMASTTADMFDGTSKATFHIPRYQGFIPHTKYNPTAVAQGDCEHVRGKSEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDGRTTNG 340          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A6A5B0E1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0E1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.460e-29
Identity = 94/308 (30.52%), Postives = 139/308 (45.13%), Query Frame = 1
Query:   49 TMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADE---------------------VDGLDQGRGGGEIAFKREFQRLDAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWL--VSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
            +    T   F +V + DY  P R     +  +      S+ FL  ++Y++DF NF DE                     V   D      ++   +   R D    V        L++   G+     I +    MF+A  DG ISW   Q+ + ++  S  +  + K      W   V+ +++ P    G    S HQ+D G  G  P  R    +T GM+STT DLFDGTTK+T+ +P Y GFIP +K N  A   GD ++ R    DLRL++ +N PGYTGH P  ++N  G A  G++  TT+G
Sbjct:   55 SFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDEGRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDD----VXXXXXXXTLLRQVYGKPPTSRILEIYAHMFDACPDGFISWDVFQEAVARLA-SFLLHQTIKISGQAGWFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLVRPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGTEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKSGTDSRTTNG 348          
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: W4FY68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY68_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.840e-28
Identity = 95/307 (30.94%), Postives = 146/307 (47.56%), Query Frame = 1
Query:   49 TMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEIA------FKREFQRL---------DAGNGVVHIR-----DMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWL--VSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
            +    T   F +V + DY  P R     +  +      S+ FL  ++Y++DF NF DE         G  IA      +   F +L          + + +  ++     D+  L++   G+     I +    MF+A  DG ISW   Q+ + ++  S  +  + K      W   V+ +++ P    G    S HQ+D G  G  P  R    +T GM+STT DLFDGTTK+T+ +P Y GFIP +K N  A   GD ++ R +  DLRL++ +N PGYTGH P  ++N  G A  G++  TT+G
Sbjct:   55 SFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDE---------GRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDDVKTLLRQVYGKPPTSRILEIYAHMFDACPDGFISWDVFQEAVARLA-SFLLHQTIKISGQAGWFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLARPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGKEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDSRTTNG 342          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FI09_ECTSI5.680e-19082.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLH4_9STRA1.240e-6537.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UFG0_9STRA1.290e-4636.84Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2FHF5_9STRA9.420e-3546.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A485KW59_9STRA1.520e-3334.04Aste57867_12656 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XRS2_9STRA2.390e-3031.25Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZS18_9STRA5.770e-3033.56Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024U6R1_9STRA3.950e-2931.02Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A5B0E1_9STRA6.460e-2930.52Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4FY68_9STRA1.840e-2830.94Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1030contigS-firma_F_contig1030:13622..16366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FI09
Max annot lvl2759|Eukaryota
Evalue9.31e-191
EggNOG OGs2CYS9@1|root,2S63T@2759|Eukaryota
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006620.1
Exons6
Model size927
Cds size927
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1030.448.1prot_S-firma_F_contig1030.448.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1030 13622..16366 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815561.904179-CDS-S-firma_F_contig1030:13621..138581622815561.904179-CDS-S-firma_F_contig1030:13621..13858Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 13622..13858 -
1696949417.359508-CDS-S-firma_F_contig1030:13621..138581696949417.359508-CDS-S-firma_F_contig1030:13621..13858Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 13622..13858 -
1622815561.9228446-CDS-S-firma_F_contig1030:14258..144201622815561.9228446-CDS-S-firma_F_contig1030:14258..14420Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 14259..14420 -
1696949417.3687975-CDS-S-firma_F_contig1030:14258..144201696949417.3687975-CDS-S-firma_F_contig1030:14258..14420Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 14259..14420 -
1622815561.9350042-CDS-S-firma_F_contig1030:14679..148001622815561.9350042-CDS-S-firma_F_contig1030:14679..14800Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 14680..14800 -
1696949417.376944-CDS-S-firma_F_contig1030:14679..148001696949417.376944-CDS-S-firma_F_contig1030:14679..14800Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 14680..14800 -
1622815561.9461238-CDS-S-firma_F_contig1030:15180..153681622815561.9461238-CDS-S-firma_F_contig1030:15180..15368Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 15181..15368 -
1696949417.385132-CDS-S-firma_F_contig1030:15180..153681696949417.385132-CDS-S-firma_F_contig1030:15180..15368Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 15181..15368 -
1622815561.9598548-CDS-S-firma_F_contig1030:15668..157681622815561.9598548-CDS-S-firma_F_contig1030:15668..15768Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 15669..15768 -
1696949417.3935447-CDS-S-firma_F_contig1030:15668..157681696949417.3935447-CDS-S-firma_F_contig1030:15668..15768Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 15669..15768 -
1622815561.9699404-CDS-S-firma_F_contig1030:16247..163661622815561.9699404-CDS-S-firma_F_contig1030:16247..16366Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 16248..16366 -
1696949417.402377-CDS-S-firma_F_contig1030:16247..163661696949417.402377-CDS-S-firma_F_contig1030:16247..16366Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1030 16248..16366 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1030.448.1

>prot_S-firma_F_contig1030.448.1 ID=prot_S-firma_F_contig1030.448.1|Name=mRNA_S-firma_F_contig1030.448.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=309bp
MGKGVAYENGVPPPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAK
PQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEIAFKREFQRLDAGN
GVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLR
KVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGD
IPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREH
GDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG
AAALGLIL*
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mRNA from alignment at S-firma_F_contig1030:13622..16366-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1030.448.1 ID=mRNA_S-firma_F_contig1030.448.1|Name=mRNA_S-firma_F_contig1030.448.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2745bp|location=Sequence derived from alignment at S-firma_F_contig1030:13622..16366- (Sphaerotrichia firma ET2_F female)
ATGGGAAAAGGCGTCGCGTACGAGAATGGGGTACCTCCTCCGCCTGCCAC GATGAGCACCTGCACCAGCGAGGCCTTCTCGAACGTGGCCAGGGGAGACT ACAGCATTCCTGACAGAAGGTGGGAAGAGAAATGTTGTACTGCGTGTTGT TGTAGCAGACAGCGCGCTGAACGGGGAAATGGGGTCGTCGTTAGAAACTG GTTCACAGCACGACAAAGAGAGGTATAGACTACAATGGTTCGCAGCGAAT TGAAGTATTTCAATTGGTGGCGTCTTGGGTGAGGGGAGAAAGGCGTTTCT GTGTATGCTGCGACAGGTTTGCCGACGTTGAACAACATAAGTAGGGTAGG GCATACTTGTAGACTGCGAATTCAAAATATTTGGTGGACCGGTTTTCGGC GTGTTTTTTACGATGCGGCCACACGACGCCTTGCCACCGGTGCCTTGTGT CCACGCCAACCAGCGGCTCATGTTCTGTAAGCTCGAGCAGATACGCAACG AGTACTGCCGATGTCTGTCAATTCGTTCGCCCTCACCTGCTCGCTTCGAT GCCAACAAATGACAAATCAACACCGCATTTCAACTCCGCGCTGTCCAGAG GTGTGTCCGCCAAGCACTTCTCGGCGAAGCCCCAAGACAGGTCTAAGCCG TTTCTGCACGACTCGGTGTACGAGCATGACTTCAGGAACTTCGCGGATGT AGGTCAACACCTAGTAGTATGCTTCAAGTATTGAATTGAATCAATTGTTG ACGACTGCTGTATCGTCCTTGACACAAGTATCACAAGAACTCCGAAACTA CTTCTGTTGCAATCTCATACCAGCCTTGGTATCTGACTATGCAGAAGACG CACGTACCCGTGACCGTGTTTCTCTGTGAGAGCTGGGTGGCGTAAAACAG CTGCTGCAAAGAAAATCAACGAGTCTAACAACTATTTTAGGCGTCGAACC AATTGCCACACGTGGTATCATACGATCGACCACAACAACAACACGCAGGA GGTAGACGGGCTAGACCAAGGCAGAGGAGGAGGGGAGATCGCCTTCAAGC GGGAGTTTCAGCGGCTGGACGCGGGAAACGGCGTCGTGCACATCCGGGAC ATGCCGCGGCTTATCCAGGGCGCTCTCGGACGTGATGTGCGGCCGTGGAT CCAGGACCGCATCCTGAAGATGTTCGAGGCGAACAGGTATATTGTATATT GGCTGCTGCATGGGAGCTCATTGTCAGGAACAAGCTCTACCTGTCACGAG CAACGATCGTGCTTCGTCCTCTTGCGCAAAAGTTGCTTACGCAGCATCAT GGCCAGACCGGACACGCCACAAGATTCTTCCACGAATGCTTGCACTATTT TACTAATACAACAATGTCTTCTCTTTAGTGAAGGTGCACGCTGAATAGCT ACGATTCCGCGTGTTCACCATGAACGAGGTTTTAGCCAACAACTGACTTG TTGACGAGCTGCATAGATTATATCAAAACTCTCGCATCAAGCGACCCTCC ACCCACAGCGTGCTGATGTTCTACCCAACCAAACGGAAATTGTCAATTGA CTCAAACAAAAAACAGGGACGGCAAAATTTCCTGGGCAGACCTTCAAGAC GGACTGAGGAAGGTGGTCGAGTCAACCAGTATGGACGTGTCTTTTAAGGA GCGGGAGATGCCGGAGTGGCTTGTCTCTAACAGAAAGGTGGGTTCGCACA CGCTGTACAATTTCTTGCGCCTGTGGAGAGCGCCAGATCAGAGAGAGGAC ACGTGTTAGATGTGTGGTGCTGCCGACACTAGTTGCTCGAGCCAGAAGAC GCGCGGTCGGTCGTCCAAGGCACGCGATAGCCGAGTGCTAACGGTTTCTC TGGAGACACGCTGACAGGAACGACGGCTTCAGGCTACGATTCCGCAATGC GAACCATACGGAGCATTTCGTTTCTAATCCTGCTGTTGGCGTACAGGTGA AACCAACGGTAAAGCACGGGCAGGTGACGGAGAGCTGCCACCAGATGGAC ATGGGCAAGGATGGAGATATTCCACGCAATCGCAGGGTCTGGTACAAGAC TGGCATGTCCTCGACCACCCTCGACCTTTTCGATGGCACTACAAAGTCCA CGTACCAGGTGTGGGTTCACTGTCTTTCGATGTTGCGGCGGGTGGCGACA TTATACTTTTTTGTTTATTTCGTGGTACTGTTGGAGCTTTGGCGAGTGTA TCGCGAGGGGGGGTCATCAGTAGTCTCGATGTCTTTATGACGTCCGACCT ATTCGGTGACATCGCCTAGGTCGCGTACGTGGGTATTTTGACACCCCCCC TCTGCACCCCAATTCCGACTCGTCCTGCCCGAAAACCTGTGAAACAGCAG CAAGGCCCTGCAAACCCCGATACACGTTAGGAAGAGAGAGAGTCCACACG TACAGTGGATCCACTCTTCGCCCACCTCGTCCCAGCCCCCCACCCACCTC AACCTCCTTCCCGCTTGTGTACGCTGCCCCGCGCTGTACTTACGGGACGA ACGTGCAGGTACCGGGCTACGGCGGTTTCATCCCCGCGAGCAAGATGAAC CGCCGCGCCCGCGAGCACGGCGACATGAAGAAGGCGAGGCCGCAGGCCTT GGACCTACGCCTCTTCTATCGCCACAACACCCCCGGGTACACGGGGCACG CGCCAACAGCGGCGCGCAATGACCCGGGCCCGGCGCACTGCGGCTCCAAC CCACTCACGACCTCGGGCGCCGCAGCGCTTGGGCTCATCTTGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig1030:13622..16366-

>mRNA_S-firma_F_contig1030.448.1 ID=mRNA_S-firma_F_contig1030.448.1|Name=mRNA_S-firma_F_contig1030.448.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1854bp|location=Sequence derived from alignment at S-firma_F_contig1030:13622..16366- (Sphaerotrichia firma ET2_F female)
ATGGGAAAAGGCGTCGCGTACGAGAATGGGGTACCTCCTCCGCCTGCCAC
GATGAGCACCTGCACCAGCGAGGCCTTCTCGAACGTGGCCAGGGGAGACT
ACAGCATTCCTGACAGAAGATGGGAAAAGGCGTCGCGTACGAGAATGGGG
TACCTCCTCCGCCTGCCACGATGAGCACCTGCACCAGCGAGGCCTTCTCG
AACGTGGCCAGGGGAGACTACAGCATTCCTGACAGAAGAGGTGTGTCCGC
CAAGCACTTCTCGGCGAAGCCCCAAGACAGGTCTAAGCCGTTTCTGCACG
ACTCGGTGTACGAGCATGACTTCAGGAACTTCGCGGATAGGTGTGTCCGC
CAAGCACTTCTCGGCGAAGCCCCAAGACAGGTCTAAGCCGTTTCTGCACG
ACTCGGTGTACGAGCATGACTTCAGGAACTTCGCGGATGAGGTAGACGGG
CTAGACCAAGGCAGAGGAGGAGGGGAGATCGCCTTCAAGCGGGAGTTTCA
GCGGCTGGACGCGGGAAACGGCGTCGTGCACATCCGGGACATGCCGCGGC
TTATCCAGGGCGCTCTCGGACGTGATGTGCGGCCGTGGATCCAGGACCGC
ATCCTGAAGATGTTCGAGGCGAACAGGAGGTAGACGGGCTAGACCAAGGC
AGAGGAGGAGGGGAGATCGCCTTCAAGCGGGAGTTTCAGCGGCTGGACGC
GGGAAACGGCGTCGTGCACATCCGGGACATGCCGCGGCTTATCCAGGGCG
CTCTCGGACGTGATGTGCGGCCGTGGATCCAGGACCGCATCCTGAAGATG
TTCGAGGCGAACAGGGACGGCAAAATTTCCTGGGCAGACCTTCAAGACGG
ACTGAGGAAGGTGGTCGAGTCAACCAGTATGGACGTGTCTTTTAAGGAGC
GGGAGATGCCGGAGTGGCTTGTCTCTAACAGAAAGGGACGGCAAAATTTC
CTGGGCAGACCTTCAAGACGGACTGAGGAAGGTGGTCGAGTCAACCAGTA
TGGACGTGTCTTTTAAGGAGCGGGAGATGCCGGAGTGGCTTGTCTCTAAC
AGAAAGGTGAAACCAACGGTAAAGCACGGGCAGGTGACGGAGAGCTGCCA
CCAGATGGACATGGGCAAGGATGGAGATATTCCACGCAATCGCAGGGTCT
GGTACAAGACTGGCATGTCCTCGACCACCCTCGACCTTTTCGATGGCACT
ACAAAGTCCACGTACCAGGTGAAACCAACGGTAAAGCACGGGCAGGTGAC
GGAGAGCTGCCACCAGATGGACATGGGCAAGGATGGAGATATTCCACGCA
ATCGCAGGGTCTGGTACAAGACTGGCATGTCCTCGACCACCCTCGACCTT
TTCGATGGCACTACAAAGTCCACGTACCAGGTACCGGGCTACGGCGGTTT
CATCCCCGCGAGCAAGATGAACCGCCGCGCCCGCGAGCACGGCGACATGA
AGAAGGCGAGGCCGCAGGCCTTGGACCTACGCCTCTTCTATCGCCACAAC
ACCCCCGGGTACACGGGGCACGCGCCAACAGCGGCGCGCAATGACCCGGG
CCCGGCGCACTGCGGCTCCAACCCACTCACGACCTCGGGCGCCGCAGCGC
TTGGGCTCATCTTGTGAGTACCGGGCTACGGCGGTTTCATCCCCGCGAGC
AAGATGAACCGCCGCGCCCGCGAGCACGGCGACATGAAGAAGGCGAGGCC
GCAGGCCTTGGACCTACGCCTCTTCTATCGCCACAACACCCCCGGGTACA
CGGGGCACGCGCCAACAGCGGCGCGCAATGACCCGGGCCCGGCGCACTGC
GGCTCCAACCCACTCACGACCTCGGGCGCCGCAGCGCTTGGGCTCATCTT
GTGA
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