mRNA_S-firma_F_contig1030.448.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI) HSP 1 Score: 533 bits (1373), Expect = 5.680e-190 Identity = 258/314 (82.17%), Postives = 279/314 (88.85%), Query Frame = 1
Query: 1 MGKGVAYENGVPPPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQG---RGG---GEIAFKREFQRLDAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAALGLIL 924
MG+GVAYENGV P TM+TC+SEAFSNV RGDY +PDRRGVSAKHFSAKPQDRSKPFLHDS+YEHDFRNF+DEVDGLD G RGG GE AFKREF RLDAGNGVVHIRDMP+LIQG LGRDVRPWI DRILKMFEA RDGK++W DLQDGLRKV ES DVS+KEREMPEWLV+NRKV P V HGQVTESC+QMDMGKDG+IPR+RR+WYKTGMSSTTLDLF+GTTK+TYQVPGYGGFIPASKMN RAREHGDMK +R LDLRLFYRHN PGYTGHAP AA NDPGP+ CGS+PLTTSGAAALG+IL
Sbjct: 1 MGRGVAYENGVALAPPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENAFKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVMPAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.240e-65 Identity = 129/340 (37.94%), Postives = 184/340 (54.12%), Query Frame = 1
Query: 1 MGKGVAYENGVP-PPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQ-------------------------GRGGGEIAFKREFQRLDAGNG-----VVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKERE-MPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAALGLIL 924
+G GV Y G P AT+ T ++E+ S+V + D+ P +RG A +A R+KPFLH ++++ +R+ E++G G G G + + +P L+ + R W+ DR+ K E +R G++ W L +V+ + S D S R MPEW++ +RK PT++HG+ SC+Q D+G G P R++ +K GM TT DLF+GTTK T+ VPGYGGFIPASK+N RA +HGDM+ AR + +LRLF++HN GYTGH AA ND G CG++P TTSGAAALGL+L
Sbjct: 46 VGHGVQYNEGPPIDEHATIKTVSAESTSHVTKQDFRPPGKRGCQAATAAAAVA-RTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAHPTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.290e-46 Identity = 112/304 (36.84%), Postives = 153/304 (50.33%), Query Frame = 1
Query: 1 MGKGVAYENGVPPPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNF-ADEVDGLDQGRGGGEIAFKREFQRLDAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAA 909
+G G+ Y +P P T T A + V YS PDRRGVSA F + K F+ +VY DF + AD V D R AF++ F G G + +P+++ ALG I+ + F +R G +SW D + L +++E+ + S +PEWLV + K P V G +SC+Q DMG + P+ + YK GM ST+ DL GTTK TY +PGY GFIP S+ N A + K+ R + + GYTGH P+ ND GP CG NPLTT+GA A
Sbjct: 34 VGTGLVYSAPLPTRPKWGETITKAATTLVRPRLYSAPDRRGVSAL-FEESNKALPKRFMGSTVYRSDFIDLRADLVKLQDACRS--PAAFQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPIPKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGA 333
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA) HSP 1 Score: 136 bits (342), Expect = 9.420e-35 Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 1
Query: 499 MPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKTGMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSGAAALGLIL 924
+PEW+ +++ + V Q S +Q DMG + P +R KTGM+ TT DL GTTK+TY +PG+ G IP ++ N R HGD +K LRL++RHN PGYTG PT A+ND G H G+NP T+SGA+ALGL +
Sbjct: 120 VPEWVTASKAITEDVVPRQPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASALGLYV 261
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A485KW59_9STRA (Aste57867_12656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW59_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.520e-33 Identity = 97/285 (34.04%), Postives = 138/285 (48.42%), Query Frame = 1
Query: 76 FSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEI---AFKREFQRL------DAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
F VA+ DY P R A + S+ FL S+Y+ DF NF D QGR EI A++ F L + G+ + D+ L++ G+ + D MF+ DG +SW Q+ + ++ + WL + V P S HQ+D G G P R +T GM+STT DLFDGTTK+T+ +P Y GFIP +K N A GD ++ R +A DLRL++ +N PGYTGH P ++N G A G++ TT+G
Sbjct: 62 FGLVAKQDYLHPTRSSKDAVEIAG-----SRTFLGQSLYQSDFLNFQD------QGRRIAEIPLEAYEAAFDDLAQGTNQEGGSKKIARDDVKHLLRKVYGKAPTSRVLDIYTHMFDTCPDGFVSWEIFQEAVLRLSSFLLHETVKTTPGQAGWLDFVQHVIPNG----TPSSSHQVDFGVYGSEPIGRPYVSRTHGMASTTSDLFDGTTKATFHIPRYQGFIPQTKFNPTAVVQGDAERGRTKAEDLRLYHLNNVPGYTGHKPVDSKNVRGEAKTGTDIRTTNG 331
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A6G0XRS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRS2_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.390e-30 Identity = 95/304 (31.25%), Postives = 143/304 (47.04%), Query Frame = 1
Query: 49 TMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEI---AFKREFQRL------DAGNGVVHIR--DMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDG--------LRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
+ T + V D+S P R + S+ FL S+Y+ DF NF +E G+ E+ AF+ F L ++ + V I D+ L+Q G+ I + MF+ DG ++W Q+ L + ++ +S + W+ +KV P S HQ+D G G P R ++ GM+STT DLFDG+TK++Y +P Y GFIP +K N A G+ +K RP+A DLRL++ +N PGYTGH P ++N G A G + TT+G
Sbjct: 52 SFEALTRNHYGQVTPQDFSNPVRAAKDNGEIA-----HSRTFLGQSLYQRDFANFHEE------GKRIAELSMEAFQAAFDSLAEEPNQESPDAVKKINRDDVGELLQAVYGKPPATRILEIYAHMFDVCPDGFVTWEVFQEATLRLSSFLLHQTIKPSSHSIG--------WVDFVKKVLPNG----TPSSSHQIDYGTYGSDPLARPYMNRSHGMASTTSDLFDGSTKASYHIPRYQGFIPHTKCNPTAVSQGECEKPRPKAEDLRLYHSNNIPGYTGHKPVDSKNVRGEAKTGCDVRTTNG 332
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA) HSP 1 Score: 125 bits (314), Expect = 5.770e-30 Identity = 97/289 (33.56%), Postives = 144/289 (49.83%), Query Frame = 1
Query: 76 FSNVARGDYSIPDR-----RGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEIA---FKREFQRL-DAGNGVVHI-RDMPR-LIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWL--VSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
F +V R D+ + + RG H K FL S+YE DF +F + QG+ E+ +KR F L +AG + RD+ + L+ G + D MF+ DG I+W ++ L ++ S + + K P W+ +S R++ P G + S HQ+D G G P R +T GM+STT DL DGTTK+T+ +P YGGF+P + N A GD + R + DLRL++ +N PGYTGH P ++N G A G++ TT+G
Sbjct: 52 FGSVYRADFGLVTKADYVSRGPKESHNDVVA---GKKFLGQSLYETDFVHFQN------QGKALLEMPREEYKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALERLTLFVS-NATSKLHGKPSWMEYLSLRRLLP----GTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNG 326
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A024U6R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6R1_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.950e-29 Identity = 94/303 (31.02%), Postives = 138/303 (45.54%), Query Frame = 1
Query: 49 TMSTCTSEAFSNVARGDYSIPDR---RGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADE---VDGLDQGRGGGEIAFKREFQRL------------DAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWLVSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
+ T + V + D+ P R RG + S+ FL ++Y+HDF NF +E + L A+ F L D + D+ ++ G+ I D MF+A DG ISW Q+ + ++ S + + K WL V HG S HQ+D G G P R +T GM+STT D+FDGT+K+T+ +P Y GFIP +K N A GD + R ++ DLRL++ +N PGYTGH P ++N G A G++ TT+G
Sbjct: 55 SFEAVTRGHYGQVTKHDFETPTRPVSRGAEIAN--------SRTFLGQTLYQHDFLNFHEEGRRIAALPM------AAYAAAFDELTHVPNQDSTSDADPKQKKIARDDVKAVLCAVYGKPPTARILDIYAHMFDACPDGFISWEIFQEAVCRL-SSLLLHQTVKVSGQAGWL--EFVAAKHVLHGGTPASSHQIDFGTYGGNPLARPYVGRTNGMASTTADMFDGTSKATFHIPRYQGFIPHTKYNPTAVAQGDCEHVRGKSEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDGRTTNG 340
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: A0A6A5B0E1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0E1_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.460e-29 Identity = 94/308 (30.52%), Postives = 139/308 (45.13%), Query Frame = 1
Query: 49 TMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADE---------------------VDGLDQGRGGGEIAFKREFQRLDAGNGVVHIRDMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWL--VSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
+ T F +V + DY P R + + S+ FL ++Y++DF NF DE V D ++ + R D V L++ G+ I + MF+A DG ISW Q+ + ++ S + + K W V+ +++ P G S HQ+D G G P R +T GM+STT DLFDGTTK+T+ +P Y GFIP +K N A GD ++ R DLRL++ +N PGYTGH P ++N G A G++ TT+G
Sbjct: 55 SFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDEGRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDD----VXXXXXXXTLLRQVYGKPPTSRILEIYAHMFDACPDGFISWDVFQEAVARLA-SFLLHQTIKISGQAGWFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLVRPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGTEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKSGTDSRTTNG 348
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Match: W4FY68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY68_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.840e-28 Identity = 95/307 (30.94%), Postives = 146/307 (47.56%), Query Frame = 1
Query: 49 TMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKPQDRSKPFLHDSVYEHDFRNFADEVDGLDQGRGGGEIA------FKREFQRL---------DAGNGVVHIR-----DMPRLIQGALGRDVRPWIQDRILKMFEANRDGKISWADLQDGLRKVVESTSMDVSFKEREMPEWL--VSNRKVKPTVKHGQVTESCHQMDMGKDGDIPRNRRVWYKT-GMSSTTLDLFDGTTKSTYQVPGYGGFIPASKMNRRAREHGDMKKARPQALDLRLFYRHNTPGYTGHAPTAARNDPGPAHCGSNPLTTSG 900
+ T F +V + DY P R + + S+ FL ++Y++DF NF DE G IA + F +L + + + ++ D+ L++ G+ I + MF+A DG ISW Q+ + ++ S + + K W V+ +++ P G S HQ+D G G P R +T GM+STT DLFDGTTK+T+ +P Y GFIP +K N A GD ++ R + DLRL++ +N PGYTGH P ++N G A G++ TT+G
Sbjct: 55 SFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDE---------GRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDDVKTLLRQVYGKPPTSRILEIYAHMFDACPDGFISWDVFQEAVARLA-SFLLHQTIKISGQAGWFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLARPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGKEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDSRTTNG 342 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1030.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1030.448.1 >prot_S-firma_F_contig1030.448.1 ID=prot_S-firma_F_contig1030.448.1|Name=mRNA_S-firma_F_contig1030.448.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=309bp MGKGVAYENGVPPPPATMSTCTSEAFSNVARGDYSIPDRRGVSAKHFSAKback to top mRNA from alignment at S-firma_F_contig1030:13622..16366- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1030.448.1 ID=mRNA_S-firma_F_contig1030.448.1|Name=mRNA_S-firma_F_contig1030.448.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2745bp|location=Sequence derived from alignment at S-firma_F_contig1030:13622..16366- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1030:13622..16366- >mRNA_S-firma_F_contig1030.448.1 ID=mRNA_S-firma_F_contig1030.448.1|Name=mRNA_S-firma_F_contig1030.448.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1854bp|location=Sequence derived from alignment at S-firma_F_contig1030:13622..16366- (Sphaerotrichia firma ET2_F female)back to top |