mRNA_S-firma_F_contig10002.65.1 (mRNA) Sphaerotrichia firma ET2_F female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10002.65.1 vs. uniprot
Match: A0A6H5KH57_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH57_9PHAE) HSP 1 Score: 131 bits (330), Expect = 4.070e-33 Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 2 Query: 2 TGSHDEAVAAAAAARASEELQQELQEARDALRKEEAGKAVLKEQMIAGVSKFRALEAQEKASRKRLEQAEAEQRVAVSAAVKMKEKDHERKLKFLQEENVQLFSEITASKAKMAEYTAEI 361
TGSHDEA AAAA EELQ+EL+E R+ALR EEAG+A LKEQM+AGV+KFRALEAQEK++R+RLE+A A QR AVSAA+K+KEKDHER+LKFL+EENVQLF EI K K + TAE+
Sbjct: 2596 TGSHDEAAAAAAV----EELQRELREVREALRVEEAGRARLKEQMLAGVAKFRALEAQEKSTRERLEEAAAGQRGAVSAALKIKEKDHERELKFLKEENVQLFKEIGEWKVKTDKLTAEL 2711 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10002.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10002.65.1 >prot_S-firma_F_contig10002.65.1 ID=prot_S-firma_F_contig10002.65.1|Name=mRNA_S-firma_F_contig10002.65.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=122bp HGLPRRGGGGGGGRQGVGGAPAGAAGGPRRAAEGGGRQGRAQGADDRRGVback to top mRNA from alignment at S-firma_F_contig10002:369..1595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10002.65.1 ID=mRNA_S-firma_F_contig10002.65.1|Name=mRNA_S-firma_F_contig10002.65.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1227bp|location=Sequence derived from alignment at S-firma_F_contig10002:369..1595- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10002:369..1595- >mRNA_S-firma_F_contig10002.65.1 ID=mRNA_S-firma_F_contig10002.65.1|Name=mRNA_S-firma_F_contig10002.65.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=732bp|location=Sequence derived from alignment at S-firma_F_contig10002:369..1595- (Sphaerotrichia firma ET2_F female)back to top |