mRNA_S-ischiensis_contig11.2176.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2176.1
Unique NamemRNA_S-ischiensis_contig11.2176.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: D8LTR4_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR4_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.300e-74
Identity = 117/198 (59.09%), Postives = 143/198 (72.22%), Query Frame = 1
Query:    1 EVAAVPAVEIPAAPAVLSGPEYLATLPGAAAPLGIFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYR-GGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEGVAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQHFG 591
            E+   P  E P  P  L+GP+Y+ TL GA+AP   FDPL ++ K  A  VKK+RE+EIKH RV+MLA LG+ VQE+AHPL+  GG+D+GPA  H QAV   FPL P  LL++VG+FE NNIY+GW  Q +K GVA LK  +EPG+FGFDPLGL PKDEAG  AM TKELNNGRLAMIA +GVW QE+ + +TI  H  
Sbjct:   41 EILQAPEAEEPPPPIELTGPQYVKTLAGASAPFPYFDPLEISSKFRAIDVKKFRESEIKHARVAMLAFLGMFVQELAHPLFENGGKDIGPAIVHFQAVTNYFPLMPALLLIIVGIFEGNNIYVGWVKQPLKLGVADLKPDYEPGSFGFDPLGLYPKDEAGKKAMMTKELNNGRLAMIATIGVWAQELVDGKTILGHLS 238          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: A0A835Z091_9STRA (Fucoxanthin chlorophyll a/c binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z091_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.990e-54
Identity = 91/173 (52.60%), Postives = 117/173 (67.63%), Query Frame = 1
Query:   82 GAAAPLGIFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGE-DLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEG--VAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQHFG 591
            GA AP G FDP+G +   D   VKK+REAE+KHGRV+MLA LGL++QE  HP +  GE DLGPA+FH+Q V+  FPL  ++L   +G+ E+  I  GW  +  ++   VA L + + PG+  FDPL L PKD AG   M+TKELNNGRLAMIA LG+W QE+ + QTI  HF 
Sbjct:   48 GATAPFGFFDPVGFSSDADDKKVKKFREAEVKHGRVAMLAFLGLLIQENFHPFFEQGEADLGPASFHLQQVDDKFPLLSLTLFFGIGLVESFTIGRGWSKRDFEDNGFVANLNEEYLPGDLKFDPLNLKPKDAAGLKEMQTKELNNGRLAMIATLGIWGQELVDGQTIAGHFS 220          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: A0A836CA40_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA40_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.390e-51
Identity = 88/182 (48.35%), Postives = 118/182 (64.84%), Query Frame = 1
Query:   67 LATLPGAAAPLGIFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYR-GGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEG------VAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQHFG 591
            L  + GA +P+  +DPLG A KVD   ++K+REAE+KHGRV+MLA LG+IVQE  HP +   G D+GPA FH+Q   ++F   P +L+L VG+ E   I  GW  Q  KE       VA LK+ + PG+ GFDPLGL P +      ++ KELNNGRLAMIA+ G+W QE+ +H T+ +HF 
Sbjct:   47 LENMSGATSPVPYWDPLGFASKVDDQELQKYREAELKHGRVAMLAALGMIVQENFHPFFNTAGRDIGPAAFHLQKTMEEFSFLPFALVLGVGLVELTTINKGWSKQDYKETGLGAGFVANLKEDYFPGDLGFDPLGLYPTNPRERTNIRNKELNNGRLAMIAIWGMWAQELVDHLTLAEHFA 228          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: A0A835ZAU2_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU2_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.820e-51
Identity = 92/187 (49.20%), Postives = 125/187 (66.84%), Query Frame = 1
Query:   67 LATLPGAAAPLGIFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIA-HPLY-RGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIK-----EG-VAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQH---FGF 594
            L  + GA AP+  +DPLG A +VD   ++K+REAE+KHGRV+MLA LG+IVQE   HP +   G DLGPA FH+Q V  ++P  P+ LL+ VG  E+  I  GW  Q  K     EG VA LK+ + PG+ GFDPLGL P+ E G  +++ KE+NNGRLAMIA+ G+W QE+ +  ++++H   FGF
Sbjct:   48 LQNMSGATAPVPFWDPLGFAAQVDGQELQKYREAELKHGRVAMLACLGMIVQEAGFHPFFGTAGADLGPAAFHLQKVGVNYPTLPLLLLVGVGAVESFTINKGWSKQDYKSSGLGEGFVANLKEDYFPGDLGFDPLGLYPQSEEGRRSIRNKEINNGRLAMIAIWGMWAQELVDGMSLYEHYQRFGF 234          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: A0A836CGF9_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF9_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.440e-47
Identity = 79/163 (48.47%), Postives = 112/163 (68.71%), Query Frame = 1
Query:  103 IFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGW-KMQSIKEGVAPLKDGFEPGNFGFDPLGLLPKDEAGAMA-MKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQH 585
            +FDPLGLA KV    +K+++E E+KHGRV+MLAVLG +V E+ HPL+    ++GP+  H Q +E++ P   +  +  +GVFEA+NIY GW K   I++G+A LKD +  G+FGFDPL L P  E      M+ KELNNGRLAM A+LG+W QE+   + +F++
Sbjct:   47 VFDPLGLASKVSDIELKRYQECELKHGRVAMLAVLGSLVAEVFHPLFPMSFEIGPSIRHFQIIEREVPYFWILAMFGIGVFEADNIYRGWVKQDPIRDGIASLKDNYIVGDFGFDPLNLGPTSEPQKFELMRAKELNNGRLAMFAILGIWAQELVNGKGVFEN 209          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: A0A835YMD9_9STRA (Fucoxanthin chlorophyll a/c protein, LI818 clade n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD9_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.560e-46
Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 1
Query:   67 LATLPGAAAPLGIFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLY-RGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEG------VAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQH---FGF 594
            L  + GA AP+  +DP GLA KVD   ++K+REAE+KHGRV+MLA LG++VQE  HP +   G D+GPA FH+Q   ++F   P++L+  VG  E   I  GW     KE       VA LK+ + PG+ GFDPLGL P        ++ KELNNGRLAMIA+ G+W QE+ +   + +H   FGF
Sbjct:   45 LEEMSGATAPVPYWDPAGLAAKVDDQELQKYREAELKHGRVAMLATLGMVVQENFHPFFGTAGRDIGPAAFHLQETMKEFDALPLALVCGVGAVEFLTIDKGWSRSDYKETGLGAGFVANLKEDYFPGDLGFDPLGLYPSSPEERTNIRNKELNNGRLAMIAIWGMWAQELVDGLPLAEHYAKFGF 230          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 1.670e-45
Identity = 87/178 (48.88%), Postives = 111/178 (62.36%), Query Frame = 1
Query:   52 SGPEYLATLPGAAAPLG---IFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEGVAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTI 576
            +G +Y+ATLPGA  P G   IFDPL L+   D   +KKWREAEIKHGRV+MLA LG++V E  HPL+ G + +GPA  H Q +   +P   V  LL +   E N I   ++  S   G   LK+ + PG+ GFDPL L P+DEA    MKTKELNNGRLAMI + G+ +QE+     I
Sbjct:   43 AGSDYVATLPGA--PFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADI 218          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 5.310e-45
Identity = 87/182 (47.80%), Postives = 108/182 (59.34%), Query Frame = 1
Query:   52 SGPEYLATLPGAAAPLG-IFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEGVAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQHFGF 594
            +G +Y+ATLPGA    G IFDPL L+       +KKWREAEIKHGRV+MLA LG++V E  HPL+ G + +GPA  H Q +   FP      LL +   E N I   +   S   G   LK+ + PG+ GFDPL L P  EA    MKTKELNNGRLAMI + G+  QE+   Q I  +F F
Sbjct:   43 AGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDILPNFFF 224          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 5.520e-44
Identity = 85/178 (47.75%), Postives = 109/178 (61.24%), Query Frame = 1
Query:   52 SGPEYLATLPGAAAPLG---IFDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEGVAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTI 576
            +G +Y+ATLPGA  P G   IFDPL L+   +   +K WREAEIKHGRV+MLA +G+IV E  HPL+ G + +GPA  H Q +   FP      LL +   E N I   +   S   G   L+D + PG+ GFDPL L PKD+AG   M+TKELNNGRLAMI + G+ +QE+     I
Sbjct:   44 AGSDYVATLPGA--PFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADI 219          
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.040e-43
Identity = 83/188 (44.15%), Postives = 115/188 (61.17%), Query Frame = 1
Query:   40 PAVLSGPEYLATLPGAAAPLGI------FDPLGLAGKVDANSVKKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGEDLGPATFHMQAVEQDFPLAPVSLLLLVGVFEANNIYMGWKMQSIKEGVAPLKDGFEPGNFGFDPLGLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQH 585
            P + +G +Y A+LPGA  P G+      FDP GLA   D  ++KKWREAE+KHGRVSMLA +G++V E+ HPL+ G   +GPA  H Q +   +PL  V+ L ++   E   I   W   S   GV  LK  + PG+ GFDPLGL PKD      ++++EL+ GR AMI VLG+ +QE+ + + I +H
Sbjct:   41 PKMTAGSDYAASLPGA--PFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGILEH 226          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR4_ECTSI1.300e-7459.09Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835Z091_9STRA2.990e-5452.60Fucoxanthin chlorophyll a/c binding protein n=1 Ta... [more]
A0A836CA40_9STRA1.390e-5148.35Light harvesting complex protein n=2 Tax=Tribonema... [more]
A0A835ZAU2_9STRA3.820e-5149.20Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A836CGF9_9STRA1.440e-4748.47Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A835YMD9_9STRA1.560e-4646.24Fucoxanthin chlorophyll a/c protein, LI818 clade n... [more]
D7G7Q6_ECTSI1.670e-4548.88Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI5.310e-4547.80Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI5.520e-4447.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI1.040e-4344.15Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1819026..1820130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.8
Seed ortholog evalue7e-59
Seed eggNOG ortholog2880.D8LTR4
Preferred nameLI818R
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2A0A8@1,2RXY6@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-28_003120.1
Exons3
Model size597
Cds size597
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2176.1prot_S-ischiensis_contig11.2176.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1819026..1820130 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815603.9482236-CDS-S-ischiensis_contig11:1819025..18190931622815603.9482236-CDS-S-ischiensis_contig11:1819025..1819093Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1819026..1819093 -
1695739797.9674482-CDS-S-ischiensis_contig11:1819025..18190931695739797.9674482-CDS-S-ischiensis_contig11:1819025..1819093Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1819026..1819093 -
1622815603.9605942-CDS-S-ischiensis_contig11:1819438..18197681622815603.9605942-CDS-S-ischiensis_contig11:1819438..1819768Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1819439..1819768 -
1695739797.978095-CDS-S-ischiensis_contig11:1819438..18197681695739797.978095-CDS-S-ischiensis_contig11:1819438..1819768Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1819439..1819768 -
1622815603.9755013-CDS-S-ischiensis_contig11:1819931..18201301622815603.9755013-CDS-S-ischiensis_contig11:1819931..1820130Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1819932..1820130 -
1695739797.9867892-CDS-S-ischiensis_contig11:1819931..18201301695739797.9867892-CDS-S-ischiensis_contig11:1819931..1820130Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1819932..1820130 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2176.1

>prot_S-ischiensis_contig11.2176.1 ID=prot_S-ischiensis_contig11.2176.1|Name=mRNA_S-ischiensis_contig11.2176.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=199bp
EVAAVPAVEIPAAPAVLSGPEYLATLPGAAAPLGIFDPLGLAGKVDANSV
KKWREAEIKHGRVSMLAVLGLIVQEIAHPLYRGGEDLGPATFHMQAVEQD
FPLAPVSLLLLVGVFEANNIYMGWKMQSIKEGVAPLKDGFEPGNFGFDPL
GLLPKDEAGAMAMKTKELNNGRLAMIAVLGVWLQEIAEHQTIFQHFGF*
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mRNA from alignment at S-ischiensis_contig11:1819026..1820130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2176.1 ID=mRNA_S-ischiensis_contig11.2176.1|Name=mRNA_S-ischiensis_contig11.2176.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1105bp|location=Sequence derived from alignment at S-ischiensis_contig11:1819026..1820130- (Schizocladia ischiensis KU_0333)
GAGGTCGCCGCTGTGCCAGCGGTCGAGATTCCCGCTGCTCCGGCTGTCCT GAGTGGCCCCGAGTACCTTGCCACCCTCCCAGGCGCAGCAGCCCCCCTGG GAATTTTCGACCCGCTTGGTCTTGCCGGCAAGGTCGACGCCAACTCCGTG AAGAAGTGGCGGGAGGCGGAGATCAAGCATGGCCGCGTTTCAATGCTGGG TGAGCTTTCTACGTGTTGTCCTCTGTGCCGCTTTCACCAAGCAGCGTGTC ACACGCCCGAACTTCACCTTGCACAACAACAACGCGACACCCTTCTCAAC ATGTCAACTCACGGCCACCTTTCTTCCCCGGCGCATGCATTTTCCCCCTT TTTCGCGCGCAGCCGTCCTTGGGCTCATTGTCCAGGAGATCGCCCACCCG CTGTACAGGGGCGGGGAGGACCTGGGGCCGGCCACCTTCCACATGCAGGC GGTGGAACAAGACTTCCCGCTCGCGCCCGTCTCTCTGCTGTTGCTGGTTG GCGTGTTCGAGGCCAACAACATCTACATGGGCTGGAAGATGCAGTCCATC AAGGAGGGCGTCGCGCCGCTCAAGGACGGCTTCGAGCCCGGGAACTTTGG CTTTGACCCCCTGGGCCTCCTGCCCAAGGACGAGGCCGGCGCCATGGCGA TGAAGACCAAGGAGCTGAACAACGGGCGCTTGGCCATGATCGGTGAGTAG GTTTGCTCCATGTTTGGTGGCGTCTGTTCAAGCAAGTTGCGCGTGCCATT TGCCTGCCACTATTGTACTCGTACTTGTTCGAGGTGCATGTGCTCGCTGT AGGCACTGGTGAAAGTTGCAGACCTGCATACAACCGTTGACGATGTGTCA AATCCCTTGGTGGCTTGGTCGTTTCTTACTGCCCGCTGGCATGTGGCGCA TTGCCTGAGCTCAAGCGTTCCTTGCAGATGTGTATGAGCCACCCACTCTG TGCATGCCCGTGCTGCCGGATCCACCTCGTCTCACCCCCATTATACCCGC CCTGCCCGCCCCTCTCCCAACTGCAAACGACACACAGCTGTTTTGGGCGT GTGGCTTCAGGAGATTGCAGAGCACCAGACCATTTTCCAGCACTTCGGCT TCTGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:1819026..1820130-

>mRNA_S-ischiensis_contig11.2176.1 ID=mRNA_S-ischiensis_contig11.2176.1|Name=mRNA_S-ischiensis_contig11.2176.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1194bp|location=Sequence derived from alignment at S-ischiensis_contig11:1819026..1820130- (Schizocladia ischiensis KU_0333)
GAGGTCGCCGCTGTGCCAGCGGTCGAGATTCCCGCTGCTCCGGCTGTCCT
GAGTGGCCCCGAGTACCTTGCCACCCTCCCAGGCGCAGCAGCCCCCCTGG
GAATTTTCGACCCGCTTGGTCTTGCCGGCAAGGTCGACGCCAACTCCGTG
AAGAAGTGGCGGGAGGCGGAGATCAAGCATGGCCGCGTTTCAATGCTGGG
AGGTCGCCGCTGTGCCAGCGGTCGAGATTCCCGCTGCTCCGGCTGTCCTG
AGTGGCCCCGAGTACCTTGCCACCCTCCCAGGCGCAGCAGCCCCCCTGGG
AATTTTCGACCCGCTTGGTCTTGCCGGCAAGGTCGACGCCAACTCCGTGA
AGAAGTGGCGGGAGGCGGAGATCAAGCATGGCCGCGTTTCAATGCTGGCC
GTCCTTGGGCTCATTGTCCAGGAGATCGCCCACCCGCTGTACAGGGGCGG
GGAGGACCTGGGGCCGGCCACCTTCCACATGCAGGCGGTGGAACAAGACT
TCCCGCTCGCGCCCGTCTCTCTGCTGTTGCTGGTTGGCGTGTTCGAGGCC
AACAACATCTACATGGGCTGGAAGATGCAGTCCATCAAGGAGGGCGTCGC
GCCGCTCAAGGACGGCTTCGAGCCCGGGAACTTTGGCTTTGACCCCCTGG
GCCTCCTGCCCAAGGACGAGGCCGGCGCCATGGCGATGAAGACCAAGGAG
CTGAACAACGGGCGCTTGGCCATGATCGCCGTCCTTGGGCTCATTGTCCA
GGAGATCGCCCACCCGCTGTACAGGGGCGGGGAGGACCTGGGGCCGGCCA
CCTTCCACATGCAGGCGGTGGAACAAGACTTCCCGCTCGCGCCCGTCTCT
CTGCTGTTGCTGGTTGGCGTGTTCGAGGCCAACAACATCTACATGGGCTG
GAAGATGCAGTCCATCAAGGAGGGCGTCGCGCCGCTCAAGGACGGCTTCG
AGCCCGGGAACTTTGGCTTTGACCCCCTGGGCCTCCTGCCCAAGGACGAG
GCCGGCGCCATGGCGATGAAGACCAAGGAGCTGAACAACGGGCGCTTGGC
CATGATCGCTGTTTTGGGCGTGTGGCTTCAGGAGATTGCAGAGCACCAGA
CCATTTTCCAGCACTTCGGCTTCTGACTGTTTTGGGCGTGTGGCTTCAGG
AGATTGCAGAGCACCAGACCATTTTCCAGCACTTCGGCTTCTGA
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