prot_S-ischiensis_contig9.20652.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20652.1
Unique Nameprot_S-ischiensis_contig9.20652.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length72
Homology
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BLAST of mRNA_S-ischiensis_contig9.20652.1 vs. uniprot
Match: D7FMV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV0_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 6.420e-13
Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 0 
Query:    1 MLRVREEQLSKLSELSHTSEQRRKSLERDRLLHPEKHRRVHRWMRDEAYQAD----RPARWGEARRANDIRLK 69
            +LR REEQ +++S L+ +  +  K L RDR+LHP+K++RVHR+MR++++       RPARWGE RR NDIRLK
Sbjct:  503 VLRAREEQFTRVSSLARSRAKDAKDLARDRILHPDKYKRVHRYMREDSHTTGGASARPARWGEERRRNDIRLK 575
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMV0_ECTSI6.420e-1352.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2303175..2305058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20652.1mRNA_S-ischiensis_contig9.20652.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2303091..2305257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20652.1 ID=prot_S-ischiensis_contig9.20652.1|Name=mRNA_S-ischiensis_contig9.20652.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=72bp
MLRVREEQLSKLSELSHTSEQRRKSLERDRLLHPEKHRRVHRWMRDEAYQ
ADRPARWGEARRANDIRLKHN*
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