prot_S-ischiensis_contig9.20616.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20616.1
Unique Nameprot_S-ischiensis_contig9.20616.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length89
Homology
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: D8LLN5_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN5_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.570e-18
Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    1 MLSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEVRSSSGGISEQINLFMDGTG 79
            +L++EYTLL GVNDSLGDAGRLAE L GV  V+NLI FN H GTPF+PSSPEAA AF+   ++ G    Q+  F D  G
Sbjct:  485 ILAVEYTLLGGVNDSLGDAGRLAEWLEGVACVVNLITFNAHAGTPFSPSSPEAAEAFRRALAARG----QLCTFRDSRG 559          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A3M7L2M4_AUXPR (Radical SAM core domain-containing protein (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L2M4_AUXPR)

HSP 1 Score: 68.2 bits (165), Expect = 1.900e-11
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    4 LEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEV 60
            ++Y LL+GVND   DA RLA+LLA V   +NLIGFNPHPGT FAPS   A +AF  V
Sbjct:  313 VQYVLLRGVNDGEADAYRLADLLARVRCKVNLIGFNPHPGTRFAPSGERATQAFLAV 369          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A661KYT2_9DELT (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661KYT2_9DELT)

HSP 1 Score: 67.8 bits (164), Expect = 2.390e-11
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 MLSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEV 60
            M++ EY L++G+NDSL DA RL +LL G+   +NLI FNPHPG  F PS  E    FQEV
Sbjct:  261 MITFEYILIKGINDSLEDARRLVKLLKGLRAKVNLIPFNPHPGVDFRPSPMERILQFQEV 320          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A653AB57_9DELT (Dual-specificity RNA methyltransferase RlmN n=2 Tax=Desulfatiglans TaxID=1549126 RepID=A0A653AB57_9DELT)

HSP 1 Score: 67.8 bits (164), Expect = 2.410e-11
Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 MLSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEV 60
            M++ EY L++GVNDS  DA RLA LL G+   INLI  NPHP +PF PSS E    FQEV
Sbjct:  251 MITFEYILMEGVNDSDRDAERLASLLRGIRAKINLIPLNPHPESPFKPSSMERILQFQEV 310          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: T0YEY8_9ZZZZ (Radical SAM enzyme, Cfr family protein (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T0YEY8_9ZZZZ)

HSP 1 Score: 65.5 bits (158), Expect = 2.420e-11
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    2 LSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEVRSSSG 65
            ++ EY +L+GVNDS  DA  L  L+AG+   +NLI FNP PG+ FAPS+P A R F E+  ++G
Sbjct:   75 ITFEYVMLRGVNDSEADARELVRLIAGLPAKVNLIPFNPWPGSQFAPSTPGAIRRFAEIVMNAG 138          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A8J6MBA1_9PROT (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Rubritepida sp. TaxID=2497596 RepID=A0A8J6MBA1_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 4.920e-11
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    2 LSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEVRSSSG 65
            ++ EY +L+GVNDS+ +A  L  LL G+   +NLI FNP PG+P+  S+PEA R F EV +++G
Sbjct:  300 ITFEYVMLRGVNDSIAEAHELVHLLEGIPAKVNLIPFNPWPGSPYKTSTPEALRGFAEVLNAAG 363          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A451C738_9GAMM (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Candidatus Kentron sp. G TaxID=2126341 RepID=A0A451C738_9GAMM)

HSP 1 Score: 66.6 bits (161), Expect = 6.390e-11
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    2 LSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEV 60
            ++ EY LL GVND  GDAGRLA LL GV   +NLI FNP PGTP+    P A   F++V
Sbjct:  268 ITFEYVLLGGVNDGPGDAGRLARLLGGVPAKVNLIPFNPFPGTPYRRPLPAAVETFRDV 326          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A661MFF3_9DELT (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MFF3_9DELT)

HSP 1 Score: 65.5 bits (158), Expect = 1.570e-10
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 MLSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEV 60
            M++ EY L+ GVNDS  DA + A LL+G+   +NLI FNPHPG+  AP S     AFQEV
Sbjct:  252 MITFEYVLIGGVNDSAEDARKTAALLSGIRAKVNLIPFNPHPGSTMAPPSEHRVLAFQEV 311          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: A0A845V0M6_9GAMM (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Wenzhouxiangella limi TaxID=2707351 RepID=A0A845V0M6_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 2.290e-10
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    2 LSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEVRSSSG 65
            ++ EYT++ GVNDS  +A  L  LL G+   +NLI FNP PGTPF PSSP+A   FQ+V  ++G
Sbjct:  264 ITFEYTMMAGVNDSRREARGLVRLLNGLPCKLNLIPFNPFPGTPFLPSSPDAIYEFQKVTRAAG 327          
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Match: UPI000E0E0879 (23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=Acidibrevibacterium fodinaquatile TaxID=1969806 RepID=UPI000E0E0879)

HSP 1 Score: 65.1 bits (157), Expect = 2.350e-10
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    2 LSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSSPEAARAFQEVRSSSG 65
            ++ EY +L+GVNDS  DA  L  L+AG+   +NLI FNP PG+ FAPS+P A R F E+   +G
Sbjct:  297 ITFEYVMLRGVNDSEADARELVRLIAGLPAKVNLIPFNPWPGSAFAPSTPVAIRRFAEIVMDAG 360          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLN5_ECTSI3.570e-1860.76Radical SAM core domain-containing protein n=2 Tax... [more]
A0A3M7L2M4_AUXPR1.900e-1161.40Radical SAM core domain-containing protein (Fragme... [more]
A0A661KYT2_9DELT2.390e-1155.00Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]
A0A653AB57_9DELT2.410e-1158.33Dual-specificity RNA methyltransferase RlmN n=2 Ta... [more]
T0YEY8_9ZZZZ2.420e-1150.00Radical SAM enzyme, Cfr family protein (Fragment) ... [more]
A0A8J6MBA1_9PROT4.920e-1148.44Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]
A0A451C738_9GAMM6.390e-1155.93Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]
A0A661MFF3_9DELT1.570e-1053.33Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]
A0A845V0M6_9GAMM2.290e-1051.56Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]
UPI000E0E08792.350e-1050.0023S rRNA (adenine(2503)-C(2))-methyltransferase Rl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..72
e-value: 6.4E-14
score: 53.8
NoneNo IPR availablePANTHERPTHR30544:SF3RADICAL SAM SUPERFAMILY PROTEINcoord: 4..65
IPR040072Methyltransferase (Class A)PANTHERPTHR3054423S RRNA METHYLTRANSFERASEcoord: 4..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1981718..1983085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20616.1mRNA_S-ischiensis_contig9.20616.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1981648..1983090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20616.1 ID=prot_S-ischiensis_contig9.20616.1|Name=mRNA_S-ischiensis_contig9.20616.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=89bp
MLSLEYTLLQGVNDSLGDAGRLAELLAGVHGVINLIGFNPHPGTPFAPSS
PEAARAFQEVRSSSGGISEQINLFMDGTGLHLSIVDIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR040072Methyltransferase_A