prot_S-ischiensis_contig9.20502.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20502.1
Unique Nameprot_S-ischiensis_contig9.20502.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length229
Homology
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BLAST of mRNA_S-ischiensis_contig9.20502.1 vs. uniprot
Match: A0A835Z165_9STRA (Acyltransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z165_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.430e-16
Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 0 
Query:   30 CSTLCQGAFAAGLLPASMMQADCQSVCEALAL---DLRANPCAVAVADLVDHPDRAAEMAFSSGNVGSALGLLLLAGNGSAEATAFVSGLHLNDPGSPDACEAVEGAHYCLASAS-----LAISLGVCLPRECDEATALQLIQNFTS 168
            C+++C      G +   M+  DCQ  C AL        ANPC  A+A +     R   M+FSSG++ SA+GLLL A NGSA A  F+   ++ND G+PDAC AV+GAHYCL +A+     L + LG CLPR C + T L  + N T+
Sbjct:   48 CASIC------GTIGKDML--DCQERCLALLQPDPSGPANPCRSAIAAVSTDTFRIEAMSFSSGHIASAIGLLLQAANGSAAAAQFLP--YVNDLGAPDACAAVDGAHYCLVAAAPGASPLPLRLGACLPRACRQDT-LGAMTNLTA 183
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z165_9STRA3.430e-1642.86Acyltransferase family-domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.768
NoneNo IPR availableTMHMMTMhelixcoord: 202..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:830625..834028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20502.1mRNA_S-ischiensis_contig9.20502.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 830625..834048 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20502.1 ID=prot_S-ischiensis_contig9.20502.1|Name=mRNA_S-ischiensis_contig9.20502.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=229bp
MPWGGGLAGAKLPILLALILPGRGDAVPACSTLCQGAFAAGLLPASMMQA
DCQSVCEALALDLRANPCAVAVADLVDHPDRAAEMAFSSGNVGSALGLLL
LAGNGSAEATAFVSGLHLNDPGSPDACEAVEGAHYCLASASLAISLGVCL
PRECDEATALQLIQNFTSPADATDGYAGATPAGPAPAQVLCVDGRAFSQD
AGSIAALCLIGTLAALALAGTAAVEVKQR
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