mRNA_S-ischiensis_contig88.20322.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A7S2DPM8_9EUKA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DPM8_9EUKA) HSP 1 Score: 114 bits (285), Expect = 1.920e-26 Identity = 64/148 (43.24%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVP----ILYSRRIA 432
++APL+Y FEY+ DDEDAKG YNW S+RLLGLPR L++ +A ++L L PD A + V + LAG Y S +GGVMGDFLG TI + E +Y+ +L D R A A W GV A+P +L+ R+ A
Sbjct: 15 SAAPLIYSFEYIVDDEDAKGEYYNWFGDSRRLLGLPRVLLAMASAAAASYLLLPPDVALRVLIVASIGTYLAGQYGHSVLGGVMGDFLGATICILEVSLYLAILMDVRRADGHAIA-----------WLVGVVALPQVCILLFGRQTA 151
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A0M0JQR0_9EUKA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQR0_9EUKA) HSP 1 Score: 116 bits (291), Expect = 4.160e-25 Identity = 65/139 (46.76%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILY 417
++APL+Y +EYV DDEDAKG YNW +S+RLLGLPR L + +A +AF L P +A + + LAG Y QS +GGVMGDFLG TI + E VY++L AD R+ R L W A V A+P LY
Sbjct: 241 SAAPLIYAYEYVVDDEDAKGEYYNWFGESRRLLGLPRVLFALGSATAVAFTLLAPPEAARALLAGALGTALAGAYGQSVLGGVMGDFLGATICMLELAVYLSLSADLPRLDT-----------RALGWLAAVVALPQLY 368
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A2K3E738_CHLRE (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E738_CHLRE) HSP 1 Score: 114 bits (286), Expect = 1.980e-24 Identity = 65/145 (44.83%), Postives = 86/145 (59.31%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 435
TS L+Y+ EYVQDDEDAK YNW AQS RLL PR + ++ A+ I L L P +A + V + +G Y + +GGV+GD+LG TI V E +VY L AD R+ A W E PLL A V+A+P++Y RRI +
Sbjct: 247 TSMVLIYVCEYVQDDEDAKRGMYNWFAQSTRLLTAPRLALGTLQALVIPLLALGPARAAIVYAVTAAVTVASGLYGNAVLGGVIGDYLGATIQVAEILVYCALSADWSRV-----AGSW-EGAAPLLLLAAVAALPVIYCRRIVD 385
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A2P6U275_CHLSO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U275_CHLSO) HSP 1 Score: 106 bits (265), Expect = 7.980e-22 Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRI-----ANC 438
T+ PL Y Y+QD+EDAK YNW AQSQRLL PR +++ + + L L +A ++ M + Y + +GGV+GD+LG TIAVTE +Y+ L AD AA AA W +PL A +AVP++Y+RRI ANC
Sbjct: 211 TALPLTYGCHYIQDEEDAKRGLYNWFAQSQRLLTPPRLAFGTLSTMAVVVLALPAAQALAVGATVLCMTVASAYYGHAVLGGVVGDYLGATIAVTELAIYLVLTADW-----AAVAARW----QPLAVLAAAAAVPVIYTRRIIQVGGANC 352
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A7S2WUJ0_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUJ0_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.680e-20 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTL 309
T+APL+Y+FEYV DD+DAKG YNW +SQRLLG R + + IA+ L +A VGV+ + LAG Y +S IGGVMGD+LG TI + E +Y+ L
Sbjct: 306 TAAPLIYMFEYVVDDQDAKGEYYNWFGESQRLLGWCRVVSALAAGAAIAYAVLPLSRATRVVGVVAIAAPLAGLYGRSIIGGVMGDYLGATICIVEVSIYVAL 408
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A150GZS3_GONPE (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZS3_GONPE) HSP 1 Score: 99.4 bits (246), Expect = 3.670e-19 Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 1
Query: 10 PLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 435
PLV Y+QDDEDAK YNW+A S RLL PR + ++ A+ + L +A + + AG Y + IGGV+GDFLG TIAV E + Y L AD R+ G E PLL A V+A+P++YSRR+ +
Sbjct: 236 PLVVCCTYIQDDEDAKRGMYNWMAASTRLLTPPRIALGTLIALAAPAVALGAVRAAAVAATVGAVTVAAGVYGHAVIGGVVGDFLGATIAVCETLSYCVLAADWGRL-------GSMEGAWPLLVLAAVAALPMIYSRRVVD 370
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A4D9D4C3_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4C3_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.000e-16 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 435
T PL+Y Y+QD++ AK YNW A SQRLL LPR + ++ + + L L ++A V++++ A Y IGGV+GD+LG TI V E VY+ L AD ++ PL+ AG + +PIL SR + +
Sbjct: 137 TVLPLIYSCHYIQDEQSAKRGLYNWFADSQRLLTLPRLCLGTLVTILVPVLLLPVEQAMSVFLVVVLVTLGASYYGNLIIGGVIGDYLGATIQVCELCVYLLLSADLKQAQTNPF---------PLVMLAGTAVLPILTSRPLID 272
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A2R5GEN0_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEN0_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.090e-16 Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQR--LLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAA 342
TS LV LF+YV D+ D KG YN A R LL PR +++S+ A+G+ L L ++ L + VL +M+ +G YA+S +GGV+GD+LG I +TE ++YMTL AD ++ AA
Sbjct: 226 TSLWLVSLFDYVHDEGDDKGLLYNTFAGCLRAGLLSWPRVILASVYALGVGALILPLERLVLIIVVLAIMIVGSGFYARSILGGVIGDYLGAIIMLTEALIYMTLTADLSNLTPAA 341
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: W7TEQ4_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEQ4_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.760e-15 Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 435
T PL+Y Y+QD++ AK YNW A SQRLL LPR + ++ + + L L ++A V++++ A Y IGGV+GDFLG TI V E VY+ L AD ++ PL+ A + +PIL SR + +
Sbjct: 238 TVLPLIYSCHYIQDEQSAKRGLYNWFADSQRLLTLPRLCLGTLVTILVPVLLLPVEQAMSVFLVVVLVTLGASYYGNLIIGGVIGDFLGATIQVCELCVYLLLSADLKQTQTNPF---------PLVMLAATAVLPILTSRPLID 373
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A0D2MT49_9CHLO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MT49_9CHLO) HSP 1 Score: 82.0 bits (201), Expect = 7.180e-14 Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 4 SAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 435
S PL+ EY++DDE AK YN +A+ Q LL PR L+ ++ ++ + L L + +V+ + Y ++ I GV+GD++G TI +TE VY+ L AD + AA GW RP+L VP+++ RRI +
Sbjct: 126 SLPLLTFCEYIEDDEHAKAGMYNVMARCQPLLTWPRFLLGTLVSLAVPALVLGAHGTLVVWATTLVITTSSIYYCRAIIQGVVGDYIGATIVITEIAVYLALSADWAAL---AAEDGW----RPILVLLAALVVPVVWGRRIVD 262 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20322.1 >prot_S-ischiensis_contig88.20322.1 ID=prot_S-ischiensis_contig88.20322.1|Name=mRNA_S-ischiensis_contig88.20322.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=147bp TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFback to top mRNA from alignment at S-ischiensis_contig88:418584..425980+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig88.20322.1 ID=mRNA_S-ischiensis_contig88.20322.1|Name=mRNA_S-ischiensis_contig88.20322.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7397bp|location=Sequence derived from alignment at S-ischiensis_contig88:418584..425980+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig88:418584..425980+ >mRNA_S-ischiensis_contig88.20322.1 ID=mRNA_S-ischiensis_contig88.20322.1|Name=mRNA_S-ischiensis_contig88.20322.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=882bp|location=Sequence derived from alignment at S-ischiensis_contig88:418584..425980+ (Schizocladia ischiensis KU_0333)back to top |