prot_S-ischiensis_contig88.20322.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig88.20322.1
Unique Nameprot_S-ischiensis_contig88.20322.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length147
Homology
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A7S2DPM8_9EUKA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DPM8_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 1.450e-29
Identity = 64/148 (43.24%), Postives = 85/148 (57.43%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVP----ILYSRRIA 144
            ++APL+Y FEY+ DDEDAKG  YNW   S+RLLGLPR L++  +A   ++L L PD A   + V  +   LAG Y  S +GGVMGDFLG TI + E  +Y+ +L D  R    A A           W  GV A+P    +L+ R+ A
Sbjct:   15 SAAPLIYSFEYIVDDEDAKGEYYNWFGDSRRLLGLPRVLLAMASAAAASYLLLPPDVALRVLIVASIGTYLAGQYGHSVLGGVMGDFLGATICILEVSLYLAILMDVRRADGHAIA-----------WLVGVVALPQVCILLFGRQTA 151          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A0M0JQR0_9EUKA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQR0_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 2.590e-28
Identity = 65/139 (46.76%), Postives = 83/139 (59.71%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILY 139
            ++APL+Y +EYV DDEDAKG  YNW  +S+RLLGLPR L +  +A  +AF  L P +A   +    +   LAG Y QS +GGVMGDFLG TI + E  VY++L AD  R+             R L W A V A+P LY
Sbjct:  241 SAAPLIYAYEYVVDDEDAKGEYYNWFGESRRLLGLPRVLFALGSATAVAFTLLAPPEAARALLAGALGTALAGAYGQSVLGGVMGDFLGATICMLELAVYLSLSADLPRLDT-----------RALGWLAAVVALPQLY 368          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A2K3E738_CHLRE (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E738_CHLRE)

HSP 1 Score: 114 bits (286), Expect = 1.370e-27
Identity = 65/145 (44.83%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 145
            TS  L+Y+ EYVQDDEDAK   YNW AQS RLL  PR  + ++ A+ I  L L P +A +   V   +   +G Y  + +GGV+GD+LG TI V E +VY  L AD  R+     A  W E   PLL  A V+A+P++Y RRI +
Sbjct:  247 TSMVLIYVCEYVQDDEDAKRGMYNWFAQSTRLLTAPRLALGTLQALVIPLLALGPARAAIVYAVTAAVTVASGLYGNAVLGGVIGDYLGATIQVAEILVYCALSADWSRV-----AGSW-EGAAPLLLLAAVAALPVIYCRRIVD 385          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A2P6U275_CHLSO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U275_CHLSO)

HSP 1 Score: 106 bits (265), Expect = 8.900e-25
Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRI-----ANC 146
            T+ PL Y   Y+QD+EDAK   YNW AQSQRLL  PR    +++ + +  L L   +A      ++ M   +  Y  + +GGV+GD+LG TIAVTE  +Y+ L AD      AA AA W    +PL   A  +AVP++Y+RRI     ANC
Sbjct:  211 TALPLTYGCHYIQDEEDAKRGLYNWFAQSQRLLTPPRLAFGTLSTMAVVVLALPAAQALAVGATVLCMTVASAYYGHAVLGGVVGDYLGATIAVTELAIYLVLTADW-----AAVAARW----QPLAVLAAAAAVPVIYTRRIIQVGGANC 352          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A7S2WUJ0_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUJ0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 5.820e-23
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTL 103
            T+APL+Y+FEYV DD+DAKG  YNW  +SQRLLG  R + +      IA+  L   +A   VGV+ +   LAG Y +S IGGVMGD+LG TI + E  +Y+ L
Sbjct:  306 TAAPLIYMFEYVVDDQDAKGEYYNWFGESQRLLGWCRVVSALAAGAAIAYAVLPLSRATRVVGVVAIAAPLAGLYGRSIIGGVMGDYLGATICIVEVSIYVAL 408          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A150GZS3_GONPE (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZS3_GONPE)

HSP 1 Score: 99.4 bits (246), Expect = 6.350e-22
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 0
Query:    4 PLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 145
            PLV    Y+QDDEDAK   YNW+A S RLL  PR  + ++ A+    + L   +A      +  +   AG Y  + IGGV+GDFLG TIAV E + Y  L AD  R+       G  E   PLL  A V+A+P++YSRR+ +
Sbjct:  236 PLVVCCTYIQDDEDAKRGMYNWMAASTRLLTPPRIALGTLIALAAPAVALGAVRAAAVAATVGAVTVAAGVYGHAVIGGVVGDFLGATIAVCETLSYCVLAADWGRL-------GSMEGAWPLLVLAAVAALPMIYSRRVVD 370          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A2R5GEN0_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEN0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.150e-19
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQR--LLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAA 114
            TS  LV LF+YV D+ D KG  YN  A   R  LL  PR +++S+ A+G+  L L  ++  L + VL +M+  +G YA+S +GGV+GD+LG  I +TE ++YMTL AD   ++ AA
Sbjct:  226 TSLWLVSLFDYVHDEGDDKGLLYNTFAGCLRAGLLSWPRVILASVYALGVGALILPLERLVLIIVVLAIMIVGSGFYARSILGGVIGDYLGAIIMLTEALIYMTLTADLSNLTPAA 341          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A4D9D4C3_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4C3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 7.270e-19
Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 145
            T  PL+Y   Y+QD++ AK   YNW A SQRLL LPR  + ++  + +  L L  ++A     V++++   A  Y    IGGV+GD+LG TI V E  VY+ L AD ++               PL+  AG + +PIL SR + +
Sbjct:  137 TVLPLIYSCHYIQDEQSAKRGLYNWFADSQRLLTLPRLCLGTLVTILVPVLLLPVEQAMSVFLVVVLVTLGASYYGNLIIGGVIGDYLGATIQVCELCVYLLLSADLKQAQTNPF---------PLVMLAGTAVLPILTSRPLID 272          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: W7TEQ4_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEQ4_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.200e-18
Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 0
Query:    1 TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 145
            T  PL+Y   Y+QD++ AK   YNW A SQRLL LPR  + ++  + +  L L  ++A     V++++   A  Y    IGGV+GDFLG TI V E  VY+ L AD ++               PL+  A  + +PIL SR + +
Sbjct:  238 TVLPLIYSCHYIQDEQSAKRGLYNWFADSQRLLTLPRLCLGTLVTILVPVLLLPVEQAMSVFLVVVLVTLGASYYGNLIIGGVIGDFLGATIQVCELCVYLLLSADLKQTQTNPF---------PLVMLAATAVLPILTSRPLID 373          
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Match: A0A0D2MT49_9CHLO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MT49_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 4.690e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 0
Query:    2 SAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAFLFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVYMTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIAN 145
            S PL+   EY++DDE AK   YN +A+ Q LL  PR L+ ++ ++ +  L L      +     +V+   +  Y ++ I GV+GD++G TI +TE  VY+ L AD   +   AA  GW    RP+L       VP+++ RRI +
Sbjct:  126 SLPLLTFCEYIEDDEHAKAGMYNVMARCQPLLTWPRFLLGTLVSLAVPALVLGAHGTLVVWATTLVITTSSIYYCRAIIQGVVGDYIGATIVITEIAVYLALSADWAAL---AAEDGW----RPILVLLAALVVPVVWGRRIVD 262          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A7S2DPM8_9EUKA1.450e-2943.24Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A0M0JQR0_9EUKA2.590e-2846.76Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A2K3E738_CHLRE1.370e-2744.83Adenosylcobinamide-GDP ribazoletransferase n=2 Tax... [more]
A0A2P6U275_CHLSO8.900e-2541.72Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A7S2WUJ0_9STRA5.820e-2349.51Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A150GZS3_GONPE6.350e-2241.55Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A2R5GEN0_9STRA6.150e-1943.97Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A4D9D4C3_9STRA7.270e-1936.55Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
W7TEQ4_9STRA6.200e-1836.55Adenosylcobinamide-GDP ribazoletransferase n=2 Tax... [more]
A0A0D2MT49_9CHLO4.690e-1634.72Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003805Adenosylcobinamide-GDP ribazoletransferasePFAMPF02654CobScoord: 6..100
e-value: 3.7E-6
score: 27.3
IPR003805Adenosylcobinamide-GDP ribazoletransferasePANTHERPTHR34148FAMILY NOT NAMEDcoord: 2..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 58..77
NoneNo IPR availableTMHMMTMhelixcoord: 34..53
NoneNo IPR availableTMHMMTMhelixcoord: 82..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:418584..425027 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20322.1mRNA_S-ischiensis_contig88.20322.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig88 418584..425980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig88.20322.1 ID=prot_S-ischiensis_contig88.20322.1|Name=mRNA_S-ischiensis_contig88.20322.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=147bp
TSAPLVYLFEYVQDDEDAKGSTYNWLAQSQRLLGLPRTLISSITAVGIAF
LFLEPDKAFLCVGVLIVMVCLAGTYAQSTIGGVMGDFLGCTIAVTECMVY
MTLLADTERMSQAAAAAGWAEAMRPLLWCAGVSAVPILYSRRIANC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003805CobS