prot_S-ischiensis_contig84.20040.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20040.1
Unique Nameprot_S-ischiensis_contig84.20040.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length267
Homology
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: D8LDH7_ECTSI (YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH7_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 1.280e-95
Identity = 144/216 (66.67%), Postives = 175/216 (81.02%), Query Frame = 0
Query:   43 KDPFASERPVTSKFNVGDIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFGESVAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESS-DVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREAC 257
            ++PF  E+ + SKF   DI  VEFVGSY +    WP+T LPEIAFLGRSNVGKSSMLN LFGE VAKVSKTPGRTR+IN+FKA+N   +DVC+FADLPGYGYAKMSKD QR+IE FL  YL  RSNLKLL+LL DSRREPL SDAG++ + E   D  +K+++VATKVDKLN +E+  NI+RL+EAFELPPGLP+ FS++TG+GKK++W YIR+A 
Sbjct:  244 RNPFKKEK-IVSKFGANDIRKVEFVGSYDDKEEIWPRTNLPEIAFLGRSNVGKSSMLNTLFGEPVAKVSKTPGRTRKINIFKAKNGNDKDVCYFADLPGYGYAKMSKDKQRTIEKFLGMYLERRSNLKLLILLADSRREPLASDAGVLEYAEDKEDRLYKILLVATKVDKLNTMESVVNIKRLQEAFELPPGLPVSFSAITGQGKKEIWSYIRQAA 458          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A836CAC1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC1_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.740e-79
Identity = 121/200 (60.50%), Postives = 155/200 (77.50%), Query Frame = 0
Query:   64 VEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFGESVAKV----SKTPGRTRQINLFKAQNAKG--RDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREAC 257
            VEF+GSY ED  AWP   +PE+AFLGRSNVGKSSMLNCLFGE  AKV    SKTPGRT+ IN+F A+   G  R++C FADLPGYGYAK++K+  R+IE FL +YL  R+ LKLL+LLVD+RR+ L SDA I+ F     V F++++VATKVDKL+ +EAA N+ R+R+ F LP  LP+ FS+VTG+G+K++W+YIREAC
Sbjct:    1 VEFIGSYAEDENAWPSEAVPEVAFLGRSNVGKSSMLNCLFGERAAKVRFVVSKTPGRTQLINIFSARGGAGGARELCRFADLPGYGYAKLAKEDMRAIEGFLMQYLERRAQLKLLILLVDARRDALDSDAEILDFAADMGVGFRVLVVATKVDKLSAMEAALNLARIRDGFGLPEELPLPFSAVTGQGRKEVWQYIREAC 200          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A4D9CYN5_9STRA (EngB-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN5_9STRA)

HSP 1 Score: 188 bits (477), Expect = 4.060e-55
Identity = 102/205 (49.76%), Postives = 140/205 (68.29%), Query Frame = 0
Query:   55 KFNVGDIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFG--ESVAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREAC 257
            +F++ DI +V F GS+++D    P   LPE+A  GRSNVGKSS+LNCL G  + VA VSKTPGRT+QINLFK  ++ G  V    DLPGYGYAK+ K  Q  I   + +YL+ R  L+L VLL+D+RREP  SD  ++ +  +++VP  L+++ATKVDKL   +   N+ RL + F+LP G+P+ FSSVTG  K+ +W  IR+AC
Sbjct:   63 QFSIDDIQDVTFEGSHLDDV---PFLGLPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVRRYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAANVP--LLVLATKVDKLKHEDMEENLGRLHQYFKLPVGMPVAFSSVTGVNKRAIWNAIRDAC 261          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: W7U6M2_9STRA (Ribosome biogenesis gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6M2_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.910e-53
Identity = 101/205 (49.27%), Postives = 140/205 (68.29%), Query Frame = 0
Query:   55 KFNVGDIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFG--ESVAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREAC 257
            +F++ DI +V F GS+++D    P   LPE+A  GRSNVGKSS+LNCL G  + VA VSKTPGRT+QINLFK  ++ G  V    DLPGYGYAK+ K  Q  I   + +YL+ R  L+L VLL+D+RREP  SD  ++ +  ++++P  L+++ATKVDKL   +   N+ RL + F+LP G+P+ FSSVTG  K+ +W  IR+AC
Sbjct:  169 QFSIDDIQDVTFEGSHLDDV---PFLGLPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVRRYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAANIP--LLVLATKVDKLKHEDIEENLGRLHQYFKLPVGMPVAFSSVTGVNKRAVWSAIRDAC 367          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A7S3U5N2_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5N2_9SPIT)

HSP 1 Score: 174 bits (441), Expect = 3.230e-50
Identity = 96/202 (47.52%), Postives = 127/202 (62.87%), Query Frame = 0
Query:   60 DIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFG--ESVAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREACRS 259
            D + V FV S+  D    P++ LPEI  +GRSNVGKSS LNCL G  + VA+VSKTPGRTR INLF    A     C   DLPGYG+AK+S + Q      +EKYL +R NL+  V+ +DS+REP   DA I+ F+  +++P   ++VATKVDKL   +    +  LR+  +L P  PI FSSVT  G+K++W Y+ E C S
Sbjct:   47 DRSGVTFVNSFT-DPAQMPRSTLPEITLVGRSNVGKSSALNCLSGRRKKVAQVSKTPGRTRLINLFSVGKA-----CMITDLPGYGFAKVSVEMQEEWRKNVEKYLRLRDNLRAAVVFIDSQREPQQVDAQILDFLMYNEIP--ALVVATKVDKLKSSQLQPCMAALRKGLQLSPDQPIPFSSVTDTGRKEVWNYLEEMCTS 240          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A0G4EB47_VITBC (EngB-type G domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EB47_VITBC)

HSP 1 Score: 178 bits (452), Expect = 2.130e-49
Identity = 100/216 (46.30%), Postives = 134/216 (62.04%), Query Frame = 0
Query:   56 FNVGDIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFGESV----AKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAK-MSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREACRSNWDQEGD 266
            F   D+  V F+G Y EDS   P T LPE+AFLGRSNVGKSSMLN L   +      ++SKTPGRT+QINLF+  + + R +    DLPGYGY + +SK+  + I +FL  YL  R+ L+L +LLVDSR      DA +++ + S DVP+  ++ ATKVD+L   E   N+ RLRE  +LP   P+ FSS+TG     LWR I +AC   ++ E D
Sbjct:  113 FEREDVGAVSFIGGY-EDSRDLPATGLPEVAFLGRSNVGKSSMLNSLQSRASERAEVRISKTPGRTQQINLFRLSDRRKRGLVVLVDLPGYGYTRSISKEDTKKIRSFLLAYLRKRAELRLFLLLVDSRLPAQEVDADVLANLRSMDVPY--LVAATKVDRLKASERDANLARLREELQLPSWQPVPFSSMTGENGPLLWRAISDACIGQYEPEAD 325          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A7S0LL08_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LL08_9EUKA)

HSP 1 Score: 170 bits (430), Expect = 5.620e-49
Identity = 95/202 (47.03%), Postives = 125/202 (61.88%), Query Frame = 0
Query:   60 DIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFG--ESVAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREACRS 259
            +   VEF+GS+ E     P   LPEI   GRSNVGKSS LN L G  +  AKVSKTPGRTR INLFK   A     C   DLPGYG+AK+S++ Q      +E Y   R  L+L VL VD++REP  SD  ++ F+  +++P   V+VATK DKL+      ++R+L E F+LP G PI FSS TG G ++LW+Y+++   S
Sbjct:   18 EAQGVEFLGSFTEPR-GMPNLRLPEITLAGRSNVGKSSALNALSGRRKKAAKVSKTPGRTRLINLFKVGKA-----CAITDLPGYGFAKVSREMQDDWRRSIEAYFRNREQLRLAVLFVDAQREPQESDGQLLEFLLYNELP--TVVVATKADKLSQTRLKASLRQLSEEFDLPEGQPIPFSSQTGAGVRELWQYLQQETMS 211          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A8J9TFI9_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TFI9_PHATR)

HSP 1 Score: 166 bits (421), Expect = 8.310e-48
Identity = 91/202 (45.05%), Postives = 126/202 (62.38%), Query Frame = 0
Query:   64 VEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFGES--------VAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREAC 257
            ++F+GS++ D    P+  +PEIAFLGRSNVGKSS+LN L   +         A+V KTPG T  +NL+   +AK   +  + DLPG+GYAK+SK  + S++   E YLA R  L L +LLVD+RR P   D  +++ +    +P  +V+VATKVDKLN  E  + +  +R+   LP G P+  SSVTG G +DLWR I EAC
Sbjct:    1 MQFLGSFL-DKQLPPRIGVPEIAFLGRSNVGKSSLLNRLSSSARQLPTHNDQARVGKTPGATASVNLYALLDAKESQILGWVDLPGFGYAKLSKQVKESVQETAENYLARRQELVLGILLVDARRIPSNDDRAVLAALFDMGIP--VVVVATKVDKLNPNELRSGLAEIRDGLGLPDGQPLPVSSVTGEGTRDLWRIILEAC 199          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A7S1JUJ9_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JUJ9_9ALVE)

HSP 1 Score: 166 bits (421), Expect = 1.160e-46
Identity = 95/201 (47.26%), Postives = 126/201 (62.69%), Query Frame = 0
Query:   56 FNVGDIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFGESV----AKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAK-MSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWR 251
            F   D+  V F+G Y EDS   P T LPE+AFLGRSNVGKSSMLN L   +      ++SKTPGRT+QINLF+  + + R +    DLPGYGY + +SK+  + I +FL  YL  R+ L+L +LLVDSR      DA +++ + S DVP+  ++ ATKVD+L   E   N+ RLRE  +LP   P+ FSS+TG     LWR
Sbjct:   90 FEREDVGAVSFIGGY-EDSRDLPATGLPEVAFLGRSNVGKSSMLNSLQSRASERAEVRISKTPGRTQQINLFRLSDRRKRGLVVLVDLPGYGYTRSISKEDTKKIRSFLLAYLRKRAELRLFLLLVDSRLPAQEVDADVLANLRSMDVPY--LVAATKVDRLKASERDANLARLREELQLPSWQPVPFSSMTGENGPLLWR 287          
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Match: A0A1Z5K8Z3_FISSO (EngB-type G domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8Z3_FISSO)

HSP 1 Score: 167 bits (422), Expect = 1.590e-46
Identity = 89/202 (44.06%), Postives = 126/202 (62.38%), Query Frame = 0
Query:   64 VEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLNCLFGESV-----AKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKDTQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPFKLVMVATKVDKLNML-EAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLWRYIREACRS 259
            ++ VG+Y++D    P+  +PE+AFLGRSNVGKSS+LN L   +V     A+V KTPG T  +NL+   N K +D+  F DLPG+G+AK+SKDT+ ++E   E YL  R  L L +LLVD RR P   D  +++ +    VP  + +VATK DK++ L E    +  + +   LP G P+  SSVTG G +DLWR + EAC +
Sbjct:    3 MKMVGAYLDDRQLPPRLGVPEVAFLGRSNVGKSSLLNRLTASAVQSSTKARVGKTPGATASVNLYSLYNRKEKDLLGFVDLPGFGFAKLSKDTKAAVEAAAENYLGKRKELMLGILLVDIRRIPSEDDRAVLAALFDMGVP--IAVVATKTDKISSLNEREKQLLEINQQLGLPEGQPLCVSSVTGEGIRDLWRIVLEACEA 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDH7_ECTSI1.280e-9566.67YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A836CAC1_9STRA2.740e-7960.50P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9CYN5_9STRA4.060e-5549.76EngB-type G domain-containing protein n=1 Tax=Nann... [more]
W7U6M2_9STRA1.910e-5349.27Ribosome biogenesis gtp-binding protein n=1 Tax=Na... [more]
A0A7S3U5N2_9SPIT3.230e-5047.52Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A0G4EB47_VITBC2.130e-4946.30EngB-type G domain-containing protein n=2 Tax=Vitr... [more]
A0A7S0LL08_9EUKA5.620e-4947.03Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A8J9TFI9_PHATR8.310e-4845.05Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S1JUJ9_9ALVE1.160e-4647.26Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A1Z5K8Z3_FISSO1.590e-4644.06EngB-type G domain-containing protein n=1 Tax=Fist... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 60..264
e-value: 4.9E-42
score: 145.6
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 30..258
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 30..258
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 84..199
e-value: 1.7E-18
score: 66.8
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 65..253
e-value: 6.3E-51
score: 170.7
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 67..257
score: 23.573
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 81..259
score: 35.864
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 75..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:67273..72297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20040.1mRNA_S-ischiensis_contig84.20040.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 67236..73789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20040.1 ID=prot_S-ischiensis_contig84.20040.1|Name=mRNA_S-ischiensis_contig84.20040.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=267bp
MEERRSRKKAARRDRLAARAAGTPGHTPRAGSPLTAKKAARQKDPFASER
PVTSKFNVGDIANVEFVGSYVEDSTAWPKTMLPEIAFLGRSNVGKSSMLN
CLFGESVAKVSKTPGRTRQINLFKAQNAKGRDVCWFADLPGYGYAKMSKD
TQRSIETFLEKYLAMRSNLKLLVLLVDSRREPLTSDAGIVSFVESSDVPF
KLVMVATKVDKLNMLEAATNIRRLREAFELPPGLPIEFSSVTGRGKKDLW
RYIREACRSNWDQEGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR019987GTP-bd_ribosome_bio_YsxC
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase