prot_S-ischiensis_contig80.19844.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: D7FXS6_ECTSI (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS6_ECTSI) HSP 1 Score: 171 bits (433), Expect = 8.260e-54 Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT 93
MSSSVEEPLDLIRLSLDERI+VKCRGERELRGKL +YDQHLNMVLGDVEETVT VEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPP+RTT
Sbjct: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A7S2FJT0_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJT0_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.250e-49 Identity = 82/93 (88.17%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT 93
++ SVEEPLDLIRLSLDERIYVKCRG+RELRGKL AYDQHLNMVLGDVEETVT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPPLRTT
Sbjct: 17 VTMSVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQEIDEDTSEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 109
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A7S2GP21_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GP21_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.890e-49 Identity = 82/90 (91.11%), Postives = 85/90 (94.44%), Query Frame = 0
Query: 4 SVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT 93
SVEEPLDLIRLSLDERIYVKCRG+RELRGKL AYDQHLNMVLGDVEETVT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPPLRTT
Sbjct: 13 SVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQELDEDTNEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 102
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A4D9CUN8_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUN8_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.990e-47 Identity = 76/92 (82.61%), Postives = 88/92 (95.65%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
MSSSV+EPLDLIRLSL+ERIYVKCRGERELRGKL A+D+HLNM+LG+VEETVT E+DE+T EEI+RTS+R++EMLFVRGDVVILVSPPLRT
Sbjct: 1 MSSSVDEPLDLIRLSLEERIYVKCRGERELRGKLHAFDRHLNMILGEVEETVTTPEIDEETDEEIIRTSRRTVEMLFVRGDVVILVSPPLRT 92
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A485K5Q3_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485K5Q3_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.720e-46 Identity = 73/90 (81.11%), Postives = 86/90 (95.56%), Query Frame = 0
Query: 3 SSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
+++ EPLDLI+LSLDERIYVKCRGERELRGKLQAYDQHLNMVL DVEETVT+VE+D++TYEEIV+ +KR +EMLFVRGDVVIL++PPLRT
Sbjct: 2 ATITEPLDLIKLSLDERIYVKCRGERELRGKLQAYDQHLNMVLSDVEETVTSVELDQETYEEIVKQAKRQVEMLFVRGDVVILIAPPLRT 91
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A067C375_SAPPC (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C375_SAPPC) HSP 1 Score: 150 bits (380), Expect = 9.730e-46 Identity = 71/90 (78.89%), Postives = 86/90 (95.56%), Query Frame = 0
Query: 3 SSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
+S++EPLDLI+LSLDERIYVKCRG+RELRGKLQAYDQHLNM+L DVEETVT+ EVD++TYEEIV+ +KR +EMLFVRGDV++LV+PPLRT
Sbjct: 2 ASIDEPLDLIKLSLDERIYVKCRGDRELRGKLQAYDQHLNMILSDVEETVTSHEVDQETYEEIVKQAKRQVEMLFVRGDVIVLVAPPLRT 91
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A0M0JVC1_9EUKA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVC1_9EUKA) HSP 1 Score: 149 bits (375), Expect = 5.990e-45 Identity = 74/91 (81.32%), Postives = 84/91 (92.31%), Query Frame = 0
Query: 2 SSSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
S+ V+EP+DL+RLSLDERI+VK RG+RELRGKL AYDQHLNMVLGDVEE VT VEVDE+TYEEI++TSKR IEMLFVRGD VIL+SPPLRT
Sbjct: 3 STLVKEPIDLVRLSLDERIHVKMRGDRELRGKLHAYDQHLNMVLGDVEEVVTTVEVDEETYEEIIKTSKRQIEMLFVRGDGVILISPPLRT 93
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: K3ZB54_SETIT (U6 snRNA-associated Sm-like protein LSm3 n=9 Tax=Poaceae TaxID=4479 RepID=K3ZB54_SETIT) HSP 1 Score: 148 bits (373), Expect = 1.320e-44 Identity = 75/89 (84.27%), Postives = 82/89 (92.13%), Query Frame = 0
Query: 4 SVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
+V+EPLDLIRLSLDERIYVK R ERELRGKL AYDQHLNM+LGDVEETVT VE+D++TYEEIVRTSKR+I LFVRGD VILVSPPLRT
Sbjct: 8 AVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEETVTTVEIDDETYEEIVRTSKRTIPFLFVRGDGVILVSPPLRT 96
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: A0A383W7B2_TETOB (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7B2_TETOB) HSP 1 Score: 147 bits (371), Expect = 2.510e-44 Identity = 70/90 (77.78%), Postives = 84/90 (93.33%), Query Frame = 0
Query: 3 SSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
++V+EPLDLI+LSLDERIYVKCRGERELRG+L AYDQHLNM+LG+VEETVT VE+D++TYEEI++T KRSI LFVRGD VIL+SPPLR+
Sbjct: 6 ATVKEPLDLIKLSLDERIYVKCRGERELRGRLHAYDQHLNMILGEVEETVTTVEIDDETYEEIIKTQKRSIPFLFVRGDSVILISPPLRS 95
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Match: L8HA54_ACACA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA54_ACACA) HSP 1 Score: 147 bits (370), Expect = 4.550e-44 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIYVKCRGERELRGKLQAYDQHLNMVLGDVEETVTAVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 92
+ S+VEEPLDLIRLSLD+RIYVK RGERELRGKL AYDQHLNMVLGDVEETVT VE+DE+T EEI++ KR++EMLFVRGD VILVSPP+RT
Sbjct: 11 LGSTVEEPLDLIRLSLDDRIYVKLRGERELRGKLHAYDQHLNMVLGDVEETVTTVEMDEETDEEIIKRRKRTVEMLFVRGDGVILVSPPVRT 102 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig80.19844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig80.19844.1 ID=prot_S-ischiensis_contig80.19844.1|Name=mRNA_S-ischiensis_contig80.19844.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=94bpback to top |