mRNA_S-ischiensis_contig7.18163.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig7.18163.1 vs. uniprot
Match: A0A835ZA61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA61_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 8.170e-6 Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 883 LLASKQRQLAVDLYRDAVEAGLLRPWSSIELGALDVGGMPPNVAGLALQACLDDMKTAAAPAAQEAGGVKFRRSDARNRAGGFVHDPSRDLTILLGDQQPGA 1188
LL S +LA++ R+ ++ G++ PWSS +LG LD+ +PP ++ L L+ L DM+ P AR +VH PS +L +L+G + G+
Sbjct: 1052 LLDSNHEELALEFTREGLDTGVINPWSSRDLGTLDLARLPPALSALVLKVALQDMRAPPPP------------DTAR-----YVHRPSAELNVLVGTRGGGS 1136 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig7.18163.1 >prot_S-ischiensis_contig7.18163.1 ID=prot_S-ischiensis_contig7.18163.1|Name=mRNA_S-ischiensis_contig7.18163.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=426bp PNVHAYGALIQAYAIGRRHAEAVSALQDMWARGLQPNAVCYASAINACARback to top mRNA from alignment at S-ischiensis_contig7:2220518..2234312+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig7.18163.1 ID=mRNA_S-ischiensis_contig7.18163.1|Name=mRNA_S-ischiensis_contig7.18163.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13795bp|location=Sequence derived from alignment at S-ischiensis_contig7:2220518..2234312+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig7:2220518..2234312+ >mRNA_S-ischiensis_contig7.18163.1 ID=mRNA_S-ischiensis_contig7.18163.1|Name=mRNA_S-ischiensis_contig7.18163.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2556bp|location=Sequence derived from alignment at S-ischiensis_contig7:2220518..2234312+ (Schizocladia ischiensis KU_0333)back to top |