prot_S-ischiensis_contig10.1598.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1598.1
Unique Nameprot_S-ischiensis_contig10.1598.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length173
Homology
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BLAST of mRNA_S-ischiensis_contig10.1598.1 vs. uniprot
Match: D7FIR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR1_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 8.630e-12
Identity = 57/147 (38.78%), Postives = 72/147 (48.98%), Query Frame = 0 
Query:    2 DGLLATLVHELEFDFEAVARGMAAGVEPCAGGEGAAVTADECRRRWACLDMEACGPDEMDMGDESWDEEEGDGDVAARDAEERCSDGGARVCSAVLENAGLSFEQLLRNCEGKRSRFLRPPVDLPSMEDASS----DDGSXXXDNDE 144
            D  LA LV E EF+F+ VA   ++ V    GGE  A+TA+ECR R+A  D E    +E + GD+     EG       D +       A     V+ENAGLSF  L R     +SRFL PP DLPS  D       DD +   D D+
Sbjct:  613 DWALARLVRECEFEFDLVAARFSSCVASGDGGEEEAITAEECRVRFARFDRE----EEDNAGDDMGGGGEGYNHNLVPDLD-------AIPAPGVIENAGLSFADLERKARNMKSRFLEPPKDLPSTRDGDDRLDGDDDAKDGDADD 748
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BLAST of mRNA_S-ischiensis_contig10.1598.1 vs. uniprot
Match: A0A6H5KFG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG8_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.560e-6
Identity = 56/157 (35.67%), Postives = 66/157 (42.04%), Query Frame = 0 
Query:    2 DGLLATLVHELEFDFEAVARGMAAGV---EPCAGGEGAAVTADECRRRWACLDMEACGPDEMDMGDESWDEEEGDGDVAARDAEERCSDGGARVCSAVLENAGLSFEQLLRNCEGKRSR-------------------------FLRPPVDLPSMED 130
            D  LA LV   EFDF+ VA   ++ +   + C  GE  AVTA+ECR R+A  D E  G    DMG  S    EG    A  D +       A     V+ENAGLSF  L R     +SR                         FL PP DLPS  D
Sbjct:  651 DRALARLVRGCEFDFDLVAARFSSAIASGDRC--GEEEAVTAEECRVRFARFDREEEGNAGDDMGGGS----EGYNHNAVPDLD-------AIPAPGVIENAGLSFADLERKARNMKSRYNSILISPDWPFLPQTVAGRFGLARFLEPPKDLPSTRD 794
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIR1_ECTSI8.630e-1238.78Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KFG8_9PHAE4.560e-635.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:2988438..2988956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1598.1mRNA_S-ischiensis_contig10.1598.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 2988150..2989723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1598.1 ID=prot_S-ischiensis_contig10.1598.1|Name=mRNA_S-ischiensis_contig10.1598.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=173bp
MDGLLATLVHELEFDFEAVARGMAAGVEPCAGGEGAAVTADECRRRWACL
DMEACGPDEMDMGDESWDEEEGDGDVAARDAEERCSDGGARVCSAVLENA
GLSFEQLLRNCEGKRSRFLRPPVDLPSMEDASSDDGSDDSDNDEGEKLLS
REDIKAAMVARTAASARQAKAA*
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