prot_S-ischiensis_contig10.1586.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1586.1
Unique Nameprot_S-ischiensis_contig10.1586.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length140
Homology
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.370e-24
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 0
Query:   52 AAEPTGPW--RKPWVQGTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSYFSRPQPAPA 140
            A    GPW  +KPWV G  R+Y++ YSEHSSF QL+DFV  +RP+ IVPTVNA   A+VE++L HFL+ MDL  DR+RL+SYF +  P  A
Sbjct:  357 AGPAVGPWTGKKPWVDGVARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRDPPSA 447          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A7S2WPP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.550e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   69 RMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSY 131
            R+Y V YSEHSSFPQL  FVG +RP  I PTVNA D A  +R++ HFL L+DLR D RR++ Y
Sbjct:   76 RLYMVPYSEHSSFPQLLQFVGRVRPLRITPTVNATDAAERDRLVRHFLHLLDLRADPRRMEYY 138          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: R1EKJ3_EMIHU (Lactamase_B domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EKJ3_EMIHU)

HSP 1 Score: 79.3 bits (194), Expect = 4.880e-15
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0
Query:   61 KPWVQG--TVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSYFSR 134
            KPWV+G  T RMY V YSEHSS+ +L+ FV ALRPR++VPTVNA+     ER+   +   MDL  D+ RLD +F R
Sbjct:  184 KPWVEGAGTTRMYGVPYSEHSSWEELQAFVAALRPRALVPTVNADTARDRERLQAAYAHAMDLAADKGRLDWHFRR 259          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A2P6TNP6_CHLSO (DNA cross-link repair SNM1 isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNP6_CHLSO)

HSP 1 Score: 80.5 bits (197), Expect = 6.390e-15
Identity = 50/104 (48.08%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   39 ADAVGARLGKPPAAAEPTG-PWRKPWVQ-----GTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSYFSRPQ 136
            AD +     K   A +PTG  WR+         G+V++  V YSEHSSFP+LRD V ALRPR I+PTVNA D A+    +  F DLMDL  DR RL  Y  R Q
Sbjct:  682 ADRIEGTAWKRAVALKPTGWTWRQKGGLDVRDLGSVQLVGVPYSEHSSFPELRDCVRALRPRRIIPTVNAGDPASSRAQVDRFADLMDLSADRSRLSYYLLRSQ 785          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 6.420e-15
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   65 QGTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSYFSRPQPAP 139
            +G V +Y + YSEHSSF +LRD V  LRPR IVPTVNA+  AA   ++  F DLMDL  DR RLD +  + + AP
Sbjct:  288 EGDVAIYGIPYSEHSSFAELRDCVKTLRPRRIVPTVNASTPAAARSLVDRFADLMDLSKDRSRLDFFLRKAKTAP 362          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: Q00YR2_OSTTA (DNA repair metallo-beta-lactamase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00YR2_OSTTA)

HSP 1 Score: 78.2 bits (191), Expect = 3.950e-14
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   61 KPWVQ--GTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILG-HFLDLMDLRHDRRRLDSYF 132
            +PW++  G  R YAV YSEHSS+ +LR+F+  L+P+ I PTVNA+     E+++  HFLDL+DL++D +R+D YF
Sbjct:  327 EPWIENEGRTRTYAVPYSEHSSYTELREFIKFLKPKRITPTVNASTENEREKLVNKHFLDLVDLKYDVKRIDFYF 401          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A2V0PNQ8_9CHLO (DNA cross-link repair protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PNQ8_9CHLO)

HSP 1 Score: 77.8 bits (190), Expect = 5.380e-14
Identity = 48/89 (53.93%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   55 PTGPW---RKP-----WVQGTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDL-MDLRHDRRRLDSYFSR 134
            PTG W   RKP     W  G   +Y+  YSEHSSF  L+  V ALRPR IVPTVNA D AA   I+  F+   MDL  DRRRLD+YFS+
Sbjct:  338 PTG-WAYRRKPGPLPCWRLGAAALYSAPYSEHSSFSDLQACVRALRPRRIVPTVNAPDAAAAAAIVERFVGCGMDLSRDRRRLDAYFSK 425          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A2P6VSA5_9CHLO (DNA cross-link repair SNM1 isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VSA5_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 1.970e-13
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   65 QGTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSYFSRPQ 136
            QG+V +  V YSEHSSFP+L+D V  LRP+ ++PTVNA+  A    I+  F  LMDL  D+ RLD +  RPQ
Sbjct:  749 QGSVTVLGVPYSEHSSFPELQDCVRTLRPKRLIPTVNADTPAKSRAIVDRFAPLMDLSQDKSRLDHFLLRPQ 820          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A1Y1HYN4_KLENI (Putative DNA repair metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYN4_KLENI)

HSP 1 Score: 75.9 bits (185), Expect = 2.690e-13
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   65 QGTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILGHFLDLMDLRHDRRRLDSYFSRPQPA 138
            QG   +Y V YSEHSSF  LR  + ALRPR I+PTVNA+       ++  F DLMDL  +R R+D++F RP+PA
Sbjct:  285 QGLATVYGVPYSEHSSFDDLRACIAALRPRKIIPTVNADTKLKAANLVARFADLMDLSANRYRIDAFF-RPRPA 357          
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Match: A0A7R9T7F0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T7F0_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 3.410e-13
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   62 PWVQ--GTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTVNANDGAAVERILG-HFLDLMDLRHDRRRLDSYF 132
            PW++  G  R YA+ YSEHSS+ +LR+F+  L+P+ I PTVNA      E+++  HFLDL+DL+ D  RLD YF
Sbjct:  330 PWIENEGRTRTYAIPYSEHSSYTELREFIKFLKPKKITPTVNAITPKDREKLVNKHFLDLVDLKQDVNRLDYYF 403          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI2.370e-2456.04DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2WPP5_9STRA2.550e-1660.32Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
R1EKJ3_EMIHU4.880e-1553.95Lactamase_B domain-containing protein (Fragment) n... [more]
A0A2P6TNP6_CHLSO6.390e-1548.08DNA cross-link repair SNM1 isoform X1 n=1 Tax=Chlo... [more]
A0A8J9WR85_9CHLO6.420e-1553.33Probable DNA cross-link repair 1A protein at N-ter... [more]
Q00YR2_OSTTA3.950e-1449.33DNA repair metallo-beta-lactamase n=2 Tax=Ostreoco... [more]
A0A2V0PNQ8_9CHLO5.380e-1453.93DNA cross-link repair protein n=1 Tax=Raphidocelis... [more]
A0A2P6VSA5_9CHLO1.970e-1351.39DNA cross-link repair SNM1 isoform X1 n=1 Tax=Micr... [more]
A0A1Y1HYN4_KLENI2.690e-1351.35Putative DNA repair metallo-beta-lactamase family ... [more]
A0A7R9T7F0_9CHLO3.410e-1350.00Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 64..103
e-value: 1.3E-11
score: 44.7
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 79..101
e-value: 1.8E-10
score: 42.8
NoneNo IPR availableGENE3D3.40.50.12650coord: 52..78
e-value: 1.8E-10
score: 42.8
NoneNo IPR availablePANTHERPTHR23240:SF6DNA CROSS-LINK REPAIR 1A PROTEINcoord: 52..128
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 52..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:2909758..2910691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1586.1mRNA_S-ischiensis_contig10.1586.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 2909758..2910691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1586.1 ID=prot_S-ischiensis_contig10.1586.1|Name=mRNA_S-ischiensis_contig10.1586.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=140bp
GQVASQGNGAGPGGEAREGSGPGSGCEEAPSLTPSGRRADAVGARLGKPP
AAAEPTGPWRKPWVQGTVRMYAVAYSEHSSFPQLRDFVGALRPRSIVPTV
NANDGAAVERILGHFLDLMDLRHDRRRLDSYFSRPQPAPA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011084DRMBL
IPR036866RibonucZ/Hydroxyglut_hydro