prot_S-ischiensis_contig1.1056.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1056.1
Unique Nameprot_S-ischiensis_contig1.1056.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length101
Homology
BLAST of mRNA_S-ischiensis_contig1.1056.1 vs. uniprot
Match: A0A835Z8W4_9STRA (WAPL domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 9.190e-19
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    7 AEDVLSGAEGDDLVLAGYCALLLGCLARRPGRGRRLVLGPTPGECLERLMRVLLAFVSLQEQAGVLTQELAAPICTLMEELQTLA 91
            A+D LS AE D+LVLAGYC+LLLGCL+ R    R  V    PG  +  L RVL AF++LQ+QA VLT E+A P+C L+EEL+ LA
Sbjct:  716 ADDCLSRAEADNLVLAGYCSLLLGCLSVRDEAARAAVAARLPGGTVSALARVLRAFLALQKQAEVLTGEMALPVCALIEELELLA 800          
BLAST of mRNA_S-ischiensis_contig1.1056.1 vs. uniprot
Match: D7FW36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW36_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.940e-14
Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    4 GDEAEDVLSGAEGDDLVLAGYCALLLGCLARRPGRGRRLVLGPTPGECLERLMRVLLAFVSLQEQAGVLTQELAAPICTLMEELQTL 90
            GD  E  +S AEG DLVL G+CALLLG L R   R RRL L   P      ++RVL AF++LQ QAGVLT+EL   +  L+EEL+ L
Sbjct:  583 GDNGEQSMSHAEGTDLVLGGHCALLLGLLVRDQERNRRLALPVLPNGDPTLIVRVLEAFMALQFQAGVLTEELVLAVQGLVEELEGL 669          
BLAST of mRNA_S-ischiensis_contig1.1056.1 vs. uniprot
Match: A0A6H5JF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF40_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.950e-14
Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    4 GDEAEDVLSGAEGDDLVLAGYCALLLGCLARRPGRGRRLVLGPTPGECLERLMRVLLAFVSLQEQAGVLTQELAAPICTLMEELQTL 90
            GD  E  +S AEG DLVL G+CALLLG L R   R RRL L   P      ++RVL AF++LQ QAGVLT+EL   +  L+EEL+ L
Sbjct:  748 GDNGEQSMSHAEGTDLVLGGHCALLLGLLVRDQERNRRLALPVLPNGDPTLIVRVLEAFMALQFQAGVLTEELVLAVQGLVEELEGL 834          
BLAST of mRNA_S-ischiensis_contig1.1056.1 vs. uniprot
Match: A0A4D9D0K1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0K1_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.190e-10
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   12 SGAEGDDLVLAGYCALLLGCLARRPGRGRRLVLGPTPGECLERLMRVLLAFVSLQEQAGVLTQELAAPICTLMEELQ 88
            S  + ++LVLAGY ALLLGC+ R     R  +L   P  C   L+RVL AF++ Q+  GVLT  + AP+  ++ EL+
Sbjct:  973 SNKQAEELVLAGYTALLLGCMMREDAPNRNAILSFLPHHCPHLLVRVLKAFLAFQQSLGVLTSSVMAPVLEMIAELE 1049          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z8W4_9STRA9.190e-1956.47WAPL domain-containing protein n=1 Tax=Tribonema m... [more]
D7FW36_ECTSI1.940e-1452.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF40_9PHAE1.950e-1452.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D0K1_9STRA1.190e-1042.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7318149..7319527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1056.1mRNA_S-ischiensis_contig1.1056.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7318148..7319527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1056.1 ID=prot_S-ischiensis_contig1.1056.1|Name=mRNA_S-ischiensis_contig1.1056.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=101bp
EGEGDEAEDVLSGAEGDDLVLAGYCALLLGCLARRPGRGRRLVLGPTPGE
CLERLMRVLLAFVSLQEQAGVLTQELAAPICTLMEELQTLALAVESQRAG
A
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