prot_S-ischiensis_contig1.369.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.369.1
Unique Nameprot_S-ischiensis_contig1.369.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length287
Homology
BLAST of mRNA_S-ischiensis_contig1.369.1 vs. uniprot
Match: A0A6H5L2U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U7_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 5.500e-23
Identity = 77/207 (37.20%), Postives = 104/207 (50.24%), Query Frame = 0
Query:  103 ARALENLVLWEGAVSLNVTEPS-LVWV-AARPREGHGTACARHGLEPTGRLLLLQDERRQGW-------------------------------VEPLTWSLDVLTAVARGLGHGLSNPSGVAGCCVPGMWCSADGCLTHAFGDAFANHGSFLGMQGDAFSVFSCR---VPPASPQPPGTPGPGARAGAPSNGTGNSTAVDADGSSSV 273
            A A E L+L +  ++L  TE S L WV AA  REGH  AC R+GL+PT   + L D+                                     +PL WS ++LT +A GLG  L    G+AGCCVPGMWC   GC T AFGD F+N+G ++G+  D +S+++C+   VP A+P    TP P        NG+  S A  A GS++ 
Sbjct:   36 AAAAEALLLADEPLTL--TEGSGLYWVKAADTREGHAAACLRNGLDPTPPDIFLPDQALPALQAAVPVEGAPDGAASSTPRNASSSDATTPPPAQPL-WSENLLTVIANGLGLELERSGGLAGCCVPGMWCGPRGCYTLAFGDTFSNYGGYVGVPADDYSIYTCKEPSVPLAAPVDSSTPAPAV------NGSDPSHAASAHGSTTA 233          
BLAST of mRNA_S-ischiensis_contig1.369.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.020e-21
Identity = 65/164 (39.63%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  120 VTEPS-LVWV-AARPREGHGTACARHGLEPTGRLLLLQDE-----------------------RRQGWVEPLT-------WSLDVLTAVARGLGHGLSNPSGVAGCCVPGMWCSADGCLTHAFGDAFANHGSFLGMQGDAFSVFSCR---VPPASPQPPGTPGP 248
            +TE S L WV AA  REGH  AC R+GL+PT   + L D+                       R     +  T       WS +++T VA GLG  L  P G+AGCCVPGMWC   GC T AFGD F+N+G ++G+  D +S+++C+   VP A+P    TP P
Sbjct:   39 LTEGSALYWVKAADTREGHAAACLRNGLDPTPPDIFLPDQTLPALQAAEQAEEAPEGAASSTPRNASSSDAATPPPARPLWSENLVTVVANGLGLELERPGGLAGCCVPGMWCGPRGCYTLAFGDTFSNYGGYVGVPPDDYSIYTCKEPSVPLAAPADSSTPAP 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2U7_9PHAE5.500e-2337.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI05_ECTSI1.020e-2139.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:2409354..2410912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.369.1mRNA_S-ischiensis_contig1.369.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 2409354..2410912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.369.1 ID=prot_S-ischiensis_contig1.369.1|Name=mRNA_S-ischiensis_contig1.369.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=287bp
GCKASDCTGRWGEAVTGEGNRGWVVICPRSFFERRCVRDARQLVMARGCS
VVGRVSGAPPTTRIRSYLCLLALIFLLPLEASASSGPDGSTGVRSEMPGR
PSARALENLVLWEGAVSLNVTEPSLVWVAARPREGHGTACARHGLEPTGR
LLLLQDERRQGWVEPLTWSLDVLTAVARGLGHGLSNPSGVAGCCVPGMWC
SADGCLTHAFGDAFANHGSFLGMQGDAFSVFSCRVPPASPQPPGTPGPGA
RAGAPSNGTGNSTAVDADGSSSVPEEGKYQEEEGEQE
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