prot_S-ischiensis_contig97.21126.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig97.21126.1
Unique Nameprot_S-ischiensis_contig97.21126.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length590
Homology
BLAST of mRNA_S-ischiensis_contig97.21126.1 vs. uniprot
Match: A0A7S3LEY4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEY4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.740e-7
Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 0
Query:  523 AQVMISTHVFHEVRNVLSSILAVSDL---------LQEKHPDAETEDMLVQQREVVEYACSVLNNVLDITRMSSNT 589
            AQ +IS  VFHEVRN LSS++A+S++         L ++  DA  +DML Q  EVV YA   LNNVLD++++ S++
Sbjct:  242 AQALISAQVFHEVRNALSSVVAMSEMASSVKDDETLPQETKDASIDDMLDQSTEVVNYALQTLNNVLDLSKIKSSS 317          
BLAST of mRNA_S-ischiensis_contig97.21126.1 vs. uniprot
Match: K0TBS7_THAOC (Histidine kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBS7_THAOC)

HSP 1 Score: 59.3 bits (142), Expect = 1.970e-5
Identity = 31/98 (31.63%), Postives = 61/98 (62.24%), Query Frame = 0
Query:  501 LQTDVQDRRRTEDLQRLEGEKHAQVMISTHVFHEVRNVLSSILAVSDLLQEKHPDAET---------EDMLVQQREVVEYACSVLNNVLDITRMSSNT 589
            +Q+  ++ +R E++++   +K AQ ++S  V+HE+RN LSS++A+ ++ +    D  T         +DM+ Q  EVV Y+ ++LNN+LDI ++ + +
Sbjct:  524 MQSTWEEHKRLEEMEKASFDK-AQALVSAQVYHEIRNALSSVIAMGEMTKALRQDPSTSSKGLISSVDDMMDQTSEVVRYSLTMLNNILDINKIKTGS 620          
BLAST of mRNA_S-ischiensis_contig97.21126.1 vs. uniprot
Match: A0A1E7FFU7_9STRA (Histidine kinase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFU7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.840e-5
Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  523 AQVMISTHVFHEVRNVLSSILAVSDLLQEKHPD---------AETEDMLVQQREVVEYACSVLNNVLDITRMSSNT 589
            AQ +IS  VFHEVRN LSS++A+S++      D         +   +ML Q +EVV Y+ ++LNN+LD++++ S +
Sbjct:  415 AQALISAQVFHEVRNALSSVVAMSEMTASLQNDPTVTSETLASSVSEMLEQNKEVVNYSLNMLNNILDVSKIKSGS 490          
BLAST of mRNA_S-ischiensis_contig97.21126.1 vs. uniprot
Match: A0A835YYH2_9STRA (Histidine kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 6.100e-5
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  523 AQVMISTHVFHEVRNVLSSILAVSDLLQEKHPDAETEDMLVQQREVVEYACSVLNNVLDIT 583
            AQ  +S HVFHE+RNVLSS+LA++D + +   D E  DM ++QR + +YA   ++ +LD+T
Sbjct:  158 AQEAMSNHVFHEMRNVLSSMLAIADTMAD---DPELRDMALRQRSMCQYAVETMDTMLDVT 215          
BLAST of mRNA_S-ischiensis_contig97.21126.1 vs. uniprot
Match: A0A836CM10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM10_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.910e-5
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 0
Query:  523 AQVMISTHVFHEVRNVLSSILAVSDLLQEKHPDAETEDMLVQQREVVEYACSVLNNVLDIT 583
            AQ  +S H+FHE+RNVLSS+LA+SD + +   D    DM ++QR + +YA   ++ +LD+T
Sbjct:   75 AQEAMSNHMFHEMRNVLSSMLAISDTMAD---DPSLRDMALRQRSMCQYAVETMDTMLDVT 132          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig97.21126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7S3LEY4_9STRA4.740e-746.05Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
K0TBS7_THAOC1.970e-531.63Histidine kinase domain-containing protein n=1 Tax... [more]
A0A1E7FFU7_9STRA2.840e-539.47Histidine kinase domain-containing protein n=1 Tax... [more]
A0A835YYH2_9STRA6.100e-545.90Histidine kinase domain-containing protein n=1 Tax... [more]
A0A836CM10_9STRA6.910e-544.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 458..478
NoneNo IPR availableGENE3D1.10.287.130coord: 455..586
e-value: 1.7E-5
score: 26.6
NoneNo IPR availableSUPERFAMILY69989C-terminal domain of PLC-betacoord: 402..523
IPR036097Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilySUPERFAMILY47384Homodimeric domain of signal transducing histidine kinasecoord: 513..588

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig97contigS-ischiensis_contig97:128527..153034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig97.21126.1mRNA_S-ischiensis_contig97.21126.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig97 115259..153130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig97.21126.1 ID=prot_S-ischiensis_contig97.21126.1|Name=mRNA_S-ischiensis_contig97.21126.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=590bp
MADFAMTETFIQTEYERESRRLVGMQRKAADGRASVDQQFAEVDNNFAEG
ARGRGDLETALSKAGTRNEMARLRERWMKSCMKSDQMYRMRVKGARDTFS
RVRNFLAEMSAKHIADTRARHEREVRFRNLLFQVQRLLRGGASNASRAQL
SQIVASQAKEVHDYQVAALMALHDRQMAREALYLETFLSVVEELDAAAAG
HSRLLVELTVKQLAAQRSQSLECQQTRTAFAADCKAKIRHAKKALTKTLE
DEAASRIRSMQEMGQVGRKSQFTESGRAPGVETVYSLLMWGGDSLEMHMS
DGVATATLCSSDSEQSSASSAEGSTQVRSVNGSEAAIVDRKEDGGTGQGK
EGDETKGGGHQKKHPAHESAPQARSLMGKPLAREDMMGPQDREAVVECFL
VERESLRAMKRVLGPQARAMKKKHDKEMHHLCREQRRDLRELRSHAQKSA
GGLLANCSKRLTAMRAETTEEVAALRAKQQEGVDRMRRSHAEQVARAREW
LQTDVQDRRRTEDLQRLEGEKHAQVMISTHVFHEVRNVLSSILAVSDLLQ
EKHPDAETEDMLVQQREVVEYACSVLNNVLDITRMSSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036097HisK_dim/P_sf