prot_S-ischiensis_contig9.20761.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20761.1
Unique Nameprot_S-ischiensis_contig9.20761.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length182
Homology
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BLAST of mRNA_S-ischiensis_contig9.20761.1 vs. uniprot
Match: A0A835YNK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.200e-9
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 0 
Query:   84 ATRVGAARASGLLRSSTGNTAGAACMVGAQRGMTTFDDREKGEETVFMRQKEKALLSKLLKKMKAQEDGGRAELMEILGDNKLPDAVIERLLDWK 178
            A R+ A R  G + S+   T   A    A  G  +F++REKGEE V +RQ+EK LL KL +  K        EL E+LG ++LPD V+E+L++WK
Sbjct:    2 ALRLAALRV-GQVSSAALRTPAIAISTRAMNGYISFNEREKGEELVHIRQQEKELLLKLRQNKKI----ANVELKELLGPHQLPDDVLEKLIEWK 91
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNK7_9STRA1.200e-942.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3005324..3009276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20761.1mRNA_S-ischiensis_contig9.20761.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3005009..3009717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20761.1 ID=prot_S-ischiensis_contig9.20761.1|Name=mRNA_S-ischiensis_contig9.20761.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=182bp
MVATVQQPASRRFRFELFFFSTVPSGVLSKQLASAAMALSAAVVLSRFVP
LFLFFYSSIRRAELSKQLASAAMALSAAAILSRATRVGAARASGLLRSST
GNTAGAACMVGAQRGMTTFDDREKGEETVFMRQKEKALLSKLLKKMKAQE
DGGRAELMEILGDNKLPDAVIERLLDWKHHE*
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