prot_S-ischiensis_contig9.20718.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20718.1
Unique Nameprot_S-ischiensis_contig9.20718.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length110
Homology
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BLAST of mRNA_S-ischiensis_contig9.20718.1 vs. uniprot
Match: D8LSM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 9.290e-11
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 0 
Query:    3 DPDLEALVNSSFIRAMGESVSAIQRNNTRLLKDADRAEAAVAAKRHQVEALASAAATLKDAAGRMPEAR--RTVAATLREMEGACEALARLNDTLAAKE 99
            DPDL+A++NS+ +  +GE V+ IQ+ N+RLL++ DR   A A KR  VE +ASAAA+L  A   +   R  R ++A  ++    CEA+ARL++ LAA+E
Sbjct:  202 DPDLDAVLNSALVLGLGERVADIQKRNSRLLQEVDRIGRAAADKRQGVERVASAAASLTAAGSDLLPRRALRLLSAARQDAVALCEAMARLDELLAARE 300
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM8_ECTSI9.290e-1144.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2819789..2820506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20718.1mRNA_S-ischiensis_contig9.20718.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2819787..2820506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20718.1 ID=prot_S-ischiensis_contig9.20718.1|Name=mRNA_S-ischiensis_contig9.20718.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=110bp
DVDPDLEALVNSSFIRAMGESVSAIQRNNTRLLKDADRAEAAVAAKRHQV
EALASAAATLKDAAGRMPEARRTVAATLREMEGACEALARLNDTLAAKES
AAAAAAAERG
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