prot_S-ischiensis_contig9.20560.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20560.1
Unique Nameprot_S-ischiensis_contig9.20560.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length133
Homology
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BLAST of mRNA_S-ischiensis_contig9.20560.1 vs. uniprot
Match: A0A7S1V251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V251_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.960e-6
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   92 RKQLVELYTRYNPTKLGDVDKLMEKYSANLPVMLQKVRKKYN 133
            RK+L+EL+TRYNP KLG VD L++KY     V+ +K+  KYN
Sbjct:   22 RKKLIELFTRYNPDKLGSVDGLLDKYRGREDVLFKKIDNKYN 63
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BLAST of mRNA_S-ischiensis_contig9.20560.1 vs. uniprot
Match: A0A7S0A709_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A709_9DINO)

HSP 1 Score: 51.6 bits (122), Expect = 1.420e-5
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:   92 RKQLVELYTRYNPTKLGDVDKLMEKYSANLPVMLQKVRKKY 132
            R +LVE+YT++NP+KLG++DKL+EKY      + +KV KKY
Sbjct:   69 RDRLVEIYTQHNPSKLGEIDKLLEKYKGQETTLYEKVCKKY 109
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BLAST of mRNA_S-ischiensis_contig9.20560.1 vs. uniprot
Match: D7FXZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ7_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 7.370e-5
Identity = 19/42 (45.24%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   92 RKQLVELYTRYNPTKLGDVDKLMEKYSANLPVMLQKVRKKYN 133
            R Q++E+Y +YNP+KLG+VD +++KY+     +++K++KKYN
Sbjct:   33 RGQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYN 74
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S1V251_9STRA2.960e-654.76Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S0A709_9DINO1.420e-553.66Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
D7FXZ7_ECTSI7.370e-545.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1394106..1396619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20560.1mRNA_S-ischiensis_contig9.20560.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1394106..1396621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20560.1 ID=prot_S-ischiensis_contig9.20560.1|Name=mRNA_S-ischiensis_contig9.20560.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=133bp
PAPAAPTSSLFGMGALGAAAAAGAPAPAPSLGGFGAGTGPAPAPAAPAAA
PGGGFLSFGSSFGAALGAPAPAPAAASAGLGAAPALTVAEARKQLVELYT
RYNPTKLGDVDKLMEKYSANLPVMLQKVRKKYN
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