prot_S-ischiensis_contig9.20512.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20512.1
Unique Nameprot_S-ischiensis_contig9.20512.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length291
Homology
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.830e-89
Identity = 134/200 (67.00%), Postives = 158/200 (79.00%), Query Frame = 0
Query:   20 SAFLAPAPGTKAFVGARVAHR--TPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            SAF+AP+    +F GA+V  +  T   ++ SM+  E+AFVPDMNRR AMN++L GS G+ VLGLA+PYI+FFVP  A      ++ARDA+G DVTV+GW+ THLPGSRELVEGIKGDATYLTV +DK I+DFGIVAVCTHLGCVVPW +AENKFICPCHGSQY+ +GKVVRGPAPLSLALSHI    GKVVF PW    F
Sbjct:   18 SAFVAPS----SFAGAKVVSKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDF 213          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 273 bits (697), Expect = 7.390e-89
Identity = 135/198 (68.18%), Postives = 155/198 (78.28%), Query Frame = 0
Query:   22 FLAPAPGTKAFVGARVAHR--TPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            F+AP+    AF GARV  +     +S + M+  E+AFVPDMNRR AMN +L GS G+ VLGLAIPYISFFVP  A      ++ARDA+G DVTV+GWV+THLPGSRELVEGIKGDATYLTV +DK I+DFGIVAVCTHLGCVVPW +AENKFICPCHGSQY+ +GKVVRGPAPLSLALSHI+   G VVF PW    F
Sbjct:   20 FVAPS----AFTGARVLSKPVAQASSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDF 213          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 7.900e-89
Identity = 138/209 (66.03%), Postives = 169/209 (80.86%), Query Frame = 0
Query:    8 VILGALALASSASAFLAPAPGTKAFVGARVAHR---TPVTSK-LSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPW 212
            V L ALA    A AF++P     +F G+ VA R   +  TSK + M+  EE FVPDM+RRTAMN++L GS+G+NVLGLA+PYI+FFVP   XXXXX + A+DA+G++VTV+ W++TH  GSREL EGIKGDATYL VTEDKK++D+GIVAVCTHLGCVVPWNKAENKF+CPCHGSQYD+ GKV+RGPAPLSLALSH++E DGKV+F  W
Sbjct:    5 VALAALAALFGADAFVSPV--ATSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEW 211          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.620e-81
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 0
Query:   43 VTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            + +K++ AV EE FVPDM+RR  MN +L GS+G+NV GLA+PYI+FFVP         + A+DALG DVTV GW+STH  G R LV+G+KGDATYL V EDK IE++G+ AVCTHLGCVVPWNKAE+KFICPCHGSQYD+ GKVVRGPAPLSLAL+H++E+DGKV+ TPW    F
Sbjct:   54 IVTKMAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDF 228          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.100e-76
Identity = 107/171 (62.57%), Postives = 136/171 (79.53%), Query Frame = 0
Query:   47 LSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            ++MA  E+AFVPDM+RR  MN +L  S+G+  LG+A+PYISFFVP G+       +A+DALG+DVT  GW+ TH  G+RELV+G+KGDATYL V +DK +E++G+ AVCTHLGCVVPWN A+ KF+CPCHGSQY++ GKVVRGPAPLSLAL+H++  DGKVVFTPW    F
Sbjct:  120 MTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDF 290          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.180e-74
Identity = 115/182 (63.19%), Postives = 136/182 (74.73%), Query Frame = 0
Query:   42 PVT-SKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXX-IVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTED----KKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            PVT S  +M+  +EA+VPDM RR A+N++L    G+ VLGLAIPY++ FVP  A       +VARDALG +VT +GW++THLPGSRELVEG+KGDATYL V +D    K I D GIVAVCTH+GCVVPWN AENKFICPCH SQYD NG+VVRGPAPLSLALSH+    GKV+  PW    F
Sbjct:   18 PVTRSTTAMSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDF 199          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 222 bits (565), Expect = 3.520e-68
Identity = 98/160 (61.25%), Postives = 119/160 (74.38%), Query Frame = 0
Query:   53 EEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPW 212
            ++ F+PDM RR  MN+LL G++G+NV    +PY+ FFVPP          A DALGS++  D W+ TH  G R LV+G+KGDATYL VTE+  IE +G+ AVCTHLGCVVPWNKA NKFICPCHGSQYD  GKVVRGPAPLSLAL+H++  DGK+VF  W
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETW 258          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A804KNF8_MUSAM (Plastoquinol--plastocyanin reductase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KNF8_MUSAM)

HSP 1 Score: 220 bits (561), Expect = 3.520e-68
Identity = 98/156 (62.82%), Postives = 117/156 (75.00%), Query Frame = 0
Query:   57 VPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPW 212
            VPDM +R  +N+LL G+L +   G+ IPY  FFVPPG+       VA+DALG+DVT+DGW+ TH PG R L +G+KGD TYL V  DK +  +GI AVCTHLGCVVPWN AE KFICPCHGSQY+  G+VVRGPAPLSLAL+H+   DGKVVF PW
Sbjct:   59 VPDMGKRQLLNLLLLGTLSLPTAGMLIPYTYFFVPPGSGGAGGGTVAKDALGNDVTLDGWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAEKKFICPCHGSQYNNQGRVVRGPAPLSLALAHVDVDDGKVVFVPW 214          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A6T7XSR0_9CRYP (Plastoquinol--plastocyanin reductase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7XSR0_9CRYP)

HSP 1 Score: 219 bits (558), Expect = 1.070e-67
Identity = 117/204 (57.35%), Postives = 143/204 (70.10%), Query Frame = 0
Query:   14 ALASSASAFLAPAPGTKAFVGARVAHRTPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            A+ S++S  LA AP       ARV+ ++  T+++S A   + FVPDM RR  MN LL GS+   VL L    IS+ VP  A   XX + A+DALG+DV +  WV THLPG R LV+G+KGDATYL V ED  +E+FG+ AVCTHLGCVVPWNKA NKF+CPCHGSQYD+NGKVVRGPAPLSLAL+   E+DGKVV + W    F
Sbjct:   27 AMRSTSSMRLAAAP-------ARVSAKSLSTTRMSAA---DGFVPDMGRRGLMNGLLLGSIAGPVLVLPAVLISYLVPAKAGGGXXGVAAKDALGNDVVIADWVKTHLPGDRSLVQGLKGDATYLIVKEDSTLENFGVNAVCTHLGCVVPWNKAANKFMCPCHGSQYDKNGKVVRGPAPLSLALAKRGESDGKVVLSSWTETDF 220          
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 218 bits (554), Expect = 2.920e-67
Identity = 118/210 (56.19%), Postives = 143/210 (68.10%), Query Frame = 0
Query:    8 VILGALALASSASAFLAPAPGTKAFVGARVAHRTPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 217
            ++L A  LA+ AS + +P    +A   +R A  T   +   MA  ++ FVPDM RR  MN LL G+  +  L LA  Y  FF PPG+XXXXX + A DALG DVTV+ W++TH  G R+LVEG+KGDATYL VT DKKIE + + AVCTHLGCVVPWN A+ KFICPCHGSQYD  GKVVRGPAPLSLAL+H+    GKVV + W    F
Sbjct:    5 ILLAACTLAA-ASGYASP----RAVAPSRSALATTHRATPLMAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDF 209          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPA4_9STRA1.830e-8967.00Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A836CBH8_9STRA7.390e-8968.18Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
D7FL45_ECTSI7.900e-8966.03Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
W7TXJ0_9STRA4.620e-8165.71Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A7S1U2M5_9STRA4.100e-7662.57Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A835ZDT9_9STRA3.180e-7463.19Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A7S2V1Z6_9STRA3.520e-6861.25Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
A0A804KNF8_MUSAM3.520e-6862.82Plastoquinol--plastocyanin reductase n=1 Tax=Musa ... [more]
A0A6T7XSR0_9CRYP1.070e-6757.35Plastoquinol--plastocyanin reductase n=1 Tax=Crypt... [more]
A0A8J5X155_DIALT2.920e-6756.19Rieske domain-containing protein n=3 Tax=Diacronem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 150..161
score: 66.04
coord: 171..183
score: 63.27
coord: 183..195
score: 60.38
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 92..215
e-value: 1.3E-38
score: 133.7
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 55..209
IPR014909Cytochrome b6-f complex Fe-S subunitPFAMPF08802CytB6-F_Fe-Scoord: 57..93
e-value: 2.8E-10
score: 40.1
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 135..194
e-value: 2.6E-12
score: 46.5
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 113..209
score: 21.785
NoneNo IPR availableGENE3D1.20.5.700coord: 49..91
e-value: 4.4E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 41..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..259
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 227..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.883
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 41..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:954743..957893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20512.1mRNA_S-ischiensis_contig9.20512.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 954653..957968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20512.1 ID=prot_S-ischiensis_contig9.20512.1|Name=mRNA_S-ischiensis_contig9.20512.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=291bp
MFTKLACVILGALALASSASAFLAPAPGTKAFVGARVAHRTPVTSKLSMA
VQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAGGGGGG
IVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFG
IVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHI
QETDGKVVFTPWWVVPFSCVFYLLHTSLASPAPARRKFMASFVSTLFPFA
GVFDCISWLARSPNFYGVVCMSTRCVGGRRTTYLCHTDSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR036922Rieske_2Fe-2S_sf
IPR014909Cyt_b6-f_cplx_Fe-S_su
IPR017941Rieske_2Fe-2S
IPR014349Rieske_Fe-S_prot