mRNA_S-ischiensis_contig9.20512.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20512.1
Unique NamemRNA_S-ischiensis_contig9.20512.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.260e-88
Identity = 134/200 (67.00%), Postives = 158/200 (79.00%), Query Frame = 1 
Query:  133 SAFLAPAPGTKAFVGARVAHR--TPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            SAF+AP+    +F GA+V  +  T   ++ SM+  E+AFVPDMNRR AMN++L GS G+ VLGLA+PYI+FFVP  A      ++ARDA+G DVTV+GW+ THLPGSRELVEGIKGDATYLTV +DK I+DFGIVAVCTHLGCVVPW +AENKFICPCHGSQY+ +GKVVRGPAPLSLALSHI    GKVVF PW    F
Sbjct:   18 SAFVAPS----SFAGAKVVSKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDF 213
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 3.820e-88
Identity = 138/209 (66.03%), Postives = 169/209 (80.86%), Query Frame = 1 
Query:   97 VILGALALASSASAFLAPAPGTKAFVGARVAHR---TPVTSK-LSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPW 711
            V L ALA    A AF++P     +F G+ VA R   +  TSK + M+  EE FVPDM+RRTAMN++L GS+G+NVLGLA+PYI+FFVP   XXXXX + A+DA+G++VTV+ W++TH  GSREL EGIKGDATYL VTEDKK++D+GIVAVCTHLGCVVPWNKAENKF+CPCHGSQYD+ GKV+RGPAPLSLALSH++E DGKV+F  W
Sbjct:    5 VALAALAALFGADAFVSPV--ATSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEW 211
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 273 bits (697), Expect = 5.060e-88
Identity = 135/198 (68.18%), Postives = 155/198 (78.28%), Query Frame = 1 
Query:  139 FLAPAPGTKAFVGARVAHR--TPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            F+AP+    AF GARV  +     +S + M+  E+AFVPDMNRR AMN +L GS G+ VLGLAIPYISFFVP  A      ++ARDA+G DVTV+GWV+THLPGSRELVEGIKGDATYLTV +DK I+DFGIVAVCTHLGCVVPW +AENKFICPCHGSQY+ +GKVVRGPAPLSLALSHI+   G VVF PW    F
Sbjct:   20 FVAPS----AFTGARVLSKPVAQASSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDF 213
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 253 bits (647), Expect = 3.040e-80
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 1 
Query:  202 VTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            + +K++ AV EE FVPDM+RR  MN +L GS+G+NV GLA+PYI+FFVP         + A+DALG DVTV GW+STH  G R LV+G+KGDATYL V EDK IE++G+ AVCTHLGCVVPWNKAE+KFICPCHGSQYD+ GKVVRGPAPLSLAL+H++E+DGKV+ TPW    F
Sbjct:   54 IVTKMAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDF 228
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.640e-75
Identity = 107/171 (62.57%), Postives = 136/171 (79.53%), Query Frame = 1 
Query:  214 LSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            ++MA  E+AFVPDM+RR  MN +L  S+G+  LG+A+PYISFFVP G+       +A+DALG+DVT  GW+ TH  G+RELV+G+KGDATYL V +DK +E++G+ AVCTHLGCVVPWN A+ KF+CPCHGSQY++ GKVVRGPAPLSLAL+H++  DGKVVFTPW    F
Sbjct:  120 MTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDF 290
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.000e-73
Identity = 115/182 (63.19%), Postives = 136/182 (74.73%), Query Frame = 1 
Query:  199 PVT-SKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXX-IVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTED----KKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            PVT S  +M+  +EA+VPDM RR A+N++L    G+ VLGLAIPY++ FVP  A       +VARDALG +VT +GW++THLPGSRELVEG+KGDATYL V +D    K I D GIVAVCTH+GCVVPWN AENKFICPCH SQYD NG+VVRGPAPLSLALSH+    GKV+  PW    F
Sbjct:   18 PVTRSTTAMSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDF 199
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A804KNF8_MUSAM (Plastoquinol--plastocyanin reductase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KNF8_MUSAM)

HSP 1 Score: 220 bits (561), Expect = 2.120e-67
Identity = 98/156 (62.82%), Postives = 117/156 (75.00%), Query Frame = 1 
Query:  244 VPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPW 711
            VPDM +R  +N+LL G+L +   G+ IPY  FFVPPG+       VA+DALG+DVT+DGW+ TH PG R L +G+KGD TYL V  DK +  +GI AVCTHLGCVVPWN AE KFICPCHGSQY+  G+VVRGPAPLSLAL+H+   DGKVVF PW
Sbjct:   59 VPDMGKRQLLNLLLLGTLSLPTAGMLIPYTYFFVPPGSGGAGGGTVAKDALGNDVTLDGWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAEKKFICPCHGSQYNNQGRVVRGPAPLSLALAHVDVDDGKVVFVPW 214
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.130e-67
Identity = 98/160 (61.25%), Postives = 119/160 (74.38%), Query Frame = 1 
Query:  232 EEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPW 711
            ++ F+PDM RR  MN+LL G++G+NV    +PY+ FFVPP          A DALGS++  D W+ TH  G R LV+G+KGDATYL VTE+  IE +G+ AVCTHLGCVVPWNKA NKFICPCHGSQYD  GKVVRGPAPLSLAL+H++  DGK+VF  W
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETW 258
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A6T7XSR0_9CRYP (Plastoquinol--plastocyanin reductase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7XSR0_9CRYP)

HSP 1 Score: 219 bits (558), Expect = 6.410e-67
Identity = 117/204 (57.35%), Postives = 143/204 (70.10%), Query Frame = 1 
Query:  115 ALASSASAFLAPAPGTKAFVGARVAHRTPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            A+ S++S  LA AP       ARV+ ++  T+++S A   + FVPDM RR  MN LL GS+   VL L    IS+ VP  A   XX + A+DALG+DV +  WV THLPG R LV+G+KGDATYL V ED  +E+FG+ AVCTHLGCVVPWNKA NKF+CPCHGSQYD+NGKVVRGPAPLSLAL+   E+DGKVV + W    F
Sbjct:   27 AMRSTSSMRLAAAP-------ARVSAKSLSTTRMSAA---DGFVPDMGRRGLMNGLLLGSIAGPVLVLPAVLISYLVPAKAGGGXXGVAAKDALGNDVVIADWVKTHLPGDRSLVQGLKGDATYLIVKEDSTLENFGVNAVCTHLGCVVPWNKAANKFMCPCHGSQYDKNGKVVRGPAPLSLALAKRGESDGKVVLSSWTETDF 220
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BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 218 bits (555), Expect = 1.230e-66
Identity = 118/210 (56.19%), Postives = 143/210 (68.10%), Query Frame = 1 
Query:   97 VILGALALASSASAFLAPAPGTKAFVGARVAHRTPVTSKLSMAVQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAXXXXXXIVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHIQETDGKVVFTPWWVVPF 726
            ++L A  LA+ AS + +P    +A   +R A  T   +   MA  ++ FVPDM RR  MN LL G+  +  L LA  Y  FF PPG+XXXXX + A DALG DVTV+ W++TH  G R+LVEG+KGDATYL VT DKKIE + + AVCTHLGCVVPWN A+ KFICPCHGSQYD  GKVVRGPAPLSLAL+H+    GKVV + W    F
Sbjct:    5 ILLAACTLAA-ASGYASP----RAVAPSRSALATTHRATPLMAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDF 209
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPA4_9STRA1.260e-8867.00Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
D7FL45_ECTSI3.820e-8866.03Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A836CBH8_9STRA5.060e-8868.18Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
W7TXJ0_9STRA3.040e-8065.71Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A7S1U2M5_9STRA2.640e-7562.57Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A835ZDT9_9STRA2.000e-7363.19Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A804KNF8_MUSAM2.120e-6762.82Plastoquinol--plastocyanin reductase n=1 Tax=Musa ... [more]
A0A7S2V1Z6_9STRA2.130e-6761.25Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
A0A6T7XSR0_9CRYP6.410e-6757.35Plastoquinol--plastocyanin reductase n=1 Tax=Crypt... [more]
A0A8J5X155_DIALT1.230e-6656.19Rieske domain-containing protein n=3 Tax=Diacronem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:954653..957968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.6
Seed ortholog evalue4.4e-70
Seed eggNOG ortholog2880.D7FL45
Preferred namePETC
KEGG rclassRC01002
KEGG koko:K02636
KEGG ReactionR03817,R08409
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009512,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009941,GO:0009987,GO:0010196,GO:0015979,GO:0016020,GO:0016491,GO:0019684,GO:0022900,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046028,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055114,GO:0070069,GO:0071944,GO:0080167,GO:0098542,GO:1990066
EggNOG free text desc.oxidoreductase activity, acting on diphenols and related substances as donors
EggNOG OGsCOG0723@1,KOG1671@2759
EC1.10.9.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionCytochrome b6-f complex iron-sulfur subunit
Ec32 orthologEc-05_006690.1
Exons3
Model size1038
Cds size873
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20512.1prot_S-ischiensis_contig9.20512.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 954743..957893 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817381.9785333-UTR-S-ischiensis_contig9:954652..9547421622817381.9785333-UTR-S-ischiensis_contig9:954652..954742Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 954653..954742 -
1695741070.9660504-UTR-S-ischiensis_contig9:954652..9547421695741070.9660504-UTR-S-ischiensis_contig9:954652..954742Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 954653..954742 -
1622817382.0306294-UTR-S-ischiensis_contig9:957893..9579681622817382.0306294-UTR-S-ischiensis_contig9:957893..957968Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 957894..957968 -
1695741071.019065-UTR-S-ischiensis_contig9:957893..9579681695741071.019065-UTR-S-ischiensis_contig9:957893..957968Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 957894..957968 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817381.9925396-CDS-S-ischiensis_contig9:954742..9552191622817381.9925396-CDS-S-ischiensis_contig9:954742..955219Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 954743..955219 -
1695741070.9786248-CDS-S-ischiensis_contig9:954742..9552191695741070.9786248-CDS-S-ischiensis_contig9:954742..955219Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 954743..955219 -
1622817382.0041175-CDS-S-ischiensis_contig9:956904..9571801622817382.0041175-CDS-S-ischiensis_contig9:956904..957180Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 956905..957180 -
1695741070.9924374-CDS-S-ischiensis_contig9:956904..9571801695741070.9924374-CDS-S-ischiensis_contig9:956904..957180Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 956905..957180 -
1622817382.0165124-CDS-S-ischiensis_contig9:957773..9578931622817382.0165124-CDS-S-ischiensis_contig9:957773..957893Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 957774..957893 -
1695741071.004618-CDS-S-ischiensis_contig9:957773..9578931695741071.004618-CDS-S-ischiensis_contig9:957773..957893Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 957774..957893 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20512.1

>prot_S-ischiensis_contig9.20512.1 ID=prot_S-ischiensis_contig9.20512.1|Name=mRNA_S-ischiensis_contig9.20512.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=291bp
MFTKLACVILGALALASSASAFLAPAPGTKAFVGARVAHRTPVTSKLSMA
VQEEAFVPDMNRRTAMNILLYGSLGINVLGLAIPYISFFVPPGAGGGGGG
IVARDALGSDVTVDGWVSTHLPGSRELVEGIKGDATYLTVTEDKKIEDFG
IVAVCTHLGCVVPWNKAENKFICPCHGSQYDRNGKVVRGPAPLSLALSHI
QETDGKVVFTPWWVVPFSCVFYLLHTSLASPAPARRKFMASFVSTLFPFA
GVFDCISWLARSPNFYGVVCMSTRCVGGRRTTYLCHTDSL*
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mRNA from alignment at S-ischiensis_contig9:954653..957968-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20512.1 ID=mRNA_S-ischiensis_contig9.20512.1|Name=mRNA_S-ischiensis_contig9.20512.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3316bp|location=Sequence derived from alignment at S-ischiensis_contig9:954653..957968- (Schizocladia ischiensis KU_0333)
GGTGGGTGGCAGCAGGCCCCCGTCACCGTCCTCTTCATCAGTGCCAGGTC
GTTGCAGGGGACCCACTGCGCAGCCATGTTCACGAAGCTGGCATGTGTTA
TCTTGGGGGCGCTCGCCCTCGCCTCGTCGGCATCGGCGTTCCTTGCGCCC
GCTCCGGGAACCAAGGCTTTCGTCGGGGCTCGCGTGGCACACCGGGTGAG
TTCGCGCATGTAGGTGCACGCGGGCCTTGGCGCCACAGAGCGGGCCATGA
CTTGGATGGGGGGCTTGATAATTGTGTAGGAGAACGTCGAGAGGTCGCAG
GTCATGTCCCCACTCTGATGCACTCGCCCGAGGACTCCATGTTCCACATC
AGCATGCGACGGCCGTGACCTGACACATGTTTCGGGCTCCGTGAGTTTGC
GACCAGAGCGTTCGTATGGTGGGGCTACCGGTCCCTTCTTGTTCTGTCCG
GTACAGTGACTGCGACGTAGGAGCGGCCGTGGGTGGGGGGCCTCACGGGC
TGACGGGCGCCTCCCCCGCGTTTCTGTGTGCCTGACGTAAGACGAAGCTC
GCACCGGCGAAAAACAGTGTTTGCCCGCTTGTACGCCTCGCCCGATGCAC
AGCCATGGTGAGGGCCTCGGGAACAGGCGATACCCTGCGAATTTTGCGCC
CTTTCGCATATTATTGTCAGCCGCTCAACCGCCGGGCCGGCTAGCGGAGC
CCTGAATCTGCGGCGCCGCGCGCGGACCCGCGCGCGCGACGAACACTAAC
CTCGCCTGCGCTGTTGCCCGTCGATCCGCCGCCCTCAGACGCCCGTGACG
TCAAAACTTAGTATGGCGGTGCAGGAGGAGGCGTTCGTGCCAGATATGAA
CCGCCGGACCGCGATGAACATCCTCCTGTACGGTTCCTTGGGGATCAACG
TGCTGGGCCTGGCTATCCCTTATATTTCCTTCTTCGTGCCCCCGGGCGCC
GGCGGCGGCGGCGGGGGGATCGTCGCGCGCGACGCCCTGGGCTCGGATGT
GACGGTGGACGGCTGGGTCAGCACCCACCTCCCGGGCAGCAGGGAGCTGG
TGGAGGGCATCAAGGTGCGCTCAACCTTGATAAGGCGGTGTGGTTTTCCG
TAACTGTCCCCTCCGCAATACACGAAGAAGGAGGGCACTGCCTCATTGTT
TTCTTCCCTCTCGTAACTTACCTCCGTTTTTTTTTCGCCCCACGCCAGGT
TTTTAGTGTGTGTGGTTGTGTGTGGGCCATGGTTTTGCGTCCGTCGCTCG
GGCAGCAGCTGAAATGGAACAATTCTCGGGAACGCTCGCTAGAATCGCAC
CCGCTCCTGTCCGTAGTCGATCGGTGTGCATGGCGTCATGTTTCAGTCGT
TCAGCGCCCCGAATCCTGGGTTCTCGGCGGGCTATAAAATGCCAGGGTGT
GGCGGGCTCCAAAAGTTTCCACGTGTACTCGTAGCATCATCCTAGCCCTT
AGTCCGTCTCCGGTCCCTCAAGGCTCATTTTGTGCGTTGCCGAGATGAGG
TTTGCCCGCTACCCTGAGTGTCATGTTCCACTGCCGATAGTGTGTGCCCC
TTATCTCCTTTATTCATGTTGTTTTCGGTTGCGCCAGACTGAGGGGGATC
TTCGTCTCTGTCAGGCCCTGGTCTAGTTTATGGTCAGAGGGCTGTCAGGC
AAACGCGCTACGAACGCCCGGCGTTTGATTTCCGTAAGGTGAGGGTTTGT
GAGTACAACTGGCGGGGACGAACGGGCTGTGGCGGCGATGGCGGTGGTGG
TGGTGCTGGTTTTTCGTCCAGTAGTGCTGCGCGCAGCCAACAACTGGCTT
GGTGGTGCTTTTTCGTCCGGTAGTGCTGCGTGCAACCGACAACTGCCTTT
GCGCGCCTGTGGCATGGCGCCGCCGGTGAAGCAGTGAGTGTTTTCCGGAG
AAGCATTGAAAAAACGTTTCTGGCTGCTGCTGTCGTGGCAGGCGGCTTTG
CCGCAGCACTTTGTCCTACCCTCCGCGTTCCCTTGACGGTGGGGGCGGGT
GCTGGGCGGATTCCTTTTTCTCGCCCTTTGGCGGACTGATGACCTCCAAT
CGGTCACAGCTTTGACTCGTTTCGCCTTTTCCTGGGTTGTGGCGCTTTCC
GTCCAAAGTAAGCATGTGCGGACATCAGAGCAGGGTGGCGAAACCCCCCC
AGCCGTTAGCAGGGCGTACCTGCAGCAGGCTCGCTGACGCCAACACGCCT
TGCAAGGCGAGTTTTTTCGCGCGTTCAAAGCGCGTATCTTGCCCTCAGAA
CGGGTATTGTAGCTTCGCTTGGGATGAGCCTTTGCCCACACGCGCAGGAC
AGGACCTCTGCTAGCGTGGTACCGTGGTCCCACGTTGTTTTCATCTCCTG
ACTGATTTTTCAGGGTAGCGGCGGCGTGTGAAGGGATGAGCTCGCCCGCC
GCTCTCCGGAACGCTTACGCCGGGATTGGTTGTGGTGATTCATATGCAAT
AAGCTCGCATGTCAAAACGCATTCAAAAAAAATTAAACGAGGTACAACGA
TTGCACGTGTTTTGGAGATTGACTGTTCTCGCTCGCTCGTGGCCGACCGA
CCGACCGACCGAGGCATGCGTGCCACGGATGACGAACGAGCAGGGCGACG
CCACCTACCTGGGCGTTAAGGAGGACAAGCAGATTGACAAAAATATTTCA
AAACAGCTGAAAACGAGGTACGAGTACAATCGCACGTGTGTGAGATTGAC
TGTTCTCTCGCTCGCGGCCGACCGACACGTACGGATGACGAACGAGCAGG
GCGACGCCACCTACCTGACGGTTACGGAGGACAAGAAGATTGAAGACTTC
GGGATCGTGGCCGTGTGCACCCACCTGGGGTGCGTGGTGCCGTGGAACAA
GGCGGAGAACAAGTTCATCTGCCCCTGCCACGGGTCCCAGTACGACCGCA
ACGGGAAGGTGGTGCGGGGGCCTGCCCCGCTGTCCCTGGCGCTCTCCCAC
ATCCAGGAGACGGACGGCAAGGTGGTCTTCACTCCCTGGTGGGTTGTTCC
TTTTTCCTGTGTTTTTTATTTATTGCATACATCTCTTGCCTCGCCCGCGC
CCGCGCGCCGAAAATTTATGGCATCGTTTGTGTCAACTTTGTTTCCTTTT
GCCGGCGTTTTTGATTGCATCTCTTGGCTCGCCCGCTCGCCGAATTTCTA
TGGTGTCGTTTGTATGTCAACTCGTTGTGTTGGAGGACGGCGGACCACTT
ATCTGTGCCACACGGATTCCCTGTGATTTAGTGCCGCGCCGTCCTCTAAA
TGCATGTGCGTGGATAAAATGTCCCATTTTCCTGGCGCCGTTGGGTTCGA
GTACGTTAGGGCATGT
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:954653..957968-

>mRNA_S-ischiensis_contig9.20512.1 ID=mRNA_S-ischiensis_contig9.20512.1|Name=mRNA_S-ischiensis_contig9.20512.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1746bp|location=Sequence derived from alignment at S-ischiensis_contig9:954653..957968- (Schizocladia ischiensis KU_0333)
ATGTTCACGAAGCTGGCATGTGTTATCTTGGGGGCGCTCGCCCTCGCCTC
GTCGGCATCGGCGTTCCTTGCGCCCGCTCCGGGAACCAAGGCTTTCGTCG
GGGCTCGCGTGGCACACCGGATGTTCACGAAGCTGGCATGTGTTATCTTG
GGGGCGCTCGCCCTCGCCTCGTCGGCATCGGCGTTCCTTGCGCCCGCTCC
GGGAACCAAGGCTTTCGTCGGGGCTCGCGTGGCACACCGGACGCCCGTGA
CGTCAAAACTTAGTATGGCGGTGCAGGAGGAGGCGTTCGTGCCAGATATG
AACCGCCGGACCGCGATGAACATCCTCCTGTACGGTTCCTTGGGGATCAA
CGTGCTGGGCCTGGCTATCCCTTATATTTCCTTCTTCGTGCCCCCGGGCG
CCGGCGGCGGCGGCGGGGGGATCGTCGCGCGCGACGCCCTGGGCTCGGAT
GTGACGGTGGACGGCTGGGTCAGCACCCACCTCCCGGGCAGCAGGGAGCT
GGTGGAGGGCATCAAGACGCCCGTGACGTCAAAACTTAGTATGGCGGTGC
AGGAGGAGGCGTTCGTGCCAGATATGAACCGCCGGACCGCGATGAACATC
CTCCTGTACGGTTCCTTGGGGATCAACGTGCTGGGCCTGGCTATCCCTTA
TATTTCCTTCTTCGTGCCCCCGGGCGCCGGCGGCGGCGGCGGGGGGATCG
TCGCGCGCGACGCCCTGGGCTCGGATGTGACGGTGGACGGCTGGGTCAGC
ACCCACCTCCCGGGCAGCAGGGAGCTGGTGGAGGGCATCAAGGGCGACGC
CACCTACCTGACGGTTACGGAGGACAAGAAGATTGAAGACTTCGGGATCG
TGGCCGTGTGCACCCACCTGGGGTGCGTGGTGCCGTGGAACAAGGCGGAG
AACAAGTTCATCTGCCCCTGCCACGGGTCCCAGTACGACCGCAACGGGAA
GGTGGTGCGGGGGCCTGCCCCGCTGTCCCTGGCGCTCTCCCACATCCAGG
AGACGGACGGCAAGGTGGTCTTCACTCCCTGGTGGGTTGTTCCTTTTTCC
TGTGTTTTTTATTTATTGCATACATCTCTTGCCTCGCCCGCGCCCGCGCG
CCGAAAATTTATGGCATCGTTTGTGTCAACTTTGTTTCCTTTTGCCGGCG
TTTTTGATTGCATCTCTTGGCTCGCCCGCTCGCCGAATTTCTATGGTGTC
GTTTGTATGTCAACTCGTTGTGTTGGAGGACGGCGGACCACTTATCTGTG
CCACACGGATTCCCTGTGAGGCGACGCCACCTACCTGACGGTTACGGAGG
ACAAGAAGATTGAAGACTTCGGGATCGTGGCCGTGTGCACCCACCTGGGG
TGCGTGGTGCCGTGGAACAAGGCGGAGAACAAGTTCATCTGCCCCTGCCA
CGGGTCCCAGTACGACCGCAACGGGAAGGTGGTGCGGGGGCCTGCCCCGC
TGTCCCTGGCGCTCTCCCACATCCAGGAGACGGACGGCAAGGTGGTCTTC
ACTCCCTGGTGGGTTGTTCCTTTTTCCTGTGTTTTTTATTTATTGCATAC
ATCTCTTGCCTCGCCCGCGCCCGCGCGCCGAAAATTTATGGCATCGTTTG
TGTCAACTTTGTTTCCTTTTGCCGGCGTTTTTGATTGCATCTCTTGGCTC
GCCCGCTCGCCGAATTTCTATGGTGTCGTTTGTATGTCAACTCGTTGTGT
TGGAGGACGGCGGACCACTTATCTGTGCCACACGGATTCCCTGTGA
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