prot_S-ischiensis_contig89.20339.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig89.20339.1
Unique Nameprot_S-ischiensis_contig89.20339.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length227
Homology
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A835Z936_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z936_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.070e-21
Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 0
Query:   73 TLTSAEAGVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVVEKHLGHLERIAKNIEGALD 206
            T+  + A V RV   +EY   LAE+ +  VV K+F P+CRSCKAMD  FKR+A +       V F E+D+  +R+L++   V A+P I +HAG  GLVE F+CGPSK+  L + ++ +      +AK   G ++
Sbjct:   11 TVDLSTAPVTRVTTSQEYHALLAENPESLVVFKWFAPWCRSCKAMDLKFKRLALE----NPCVVFAEIDIDVSRELKRQHGVKAIPAIHMHAGHLGLVENFTCGPSKVPLLSRRIDMYANVAAYVAKAKGGLME 140          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A6H5KYE3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYE3_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.990e-18
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 0
Query:   76 SAEAGVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVVE--KHLGHLERIAKNIEGALDGALDDVNFGGP 217
            +A A V  +  + EY   L  + +  VV+KFF P+CRSCKA+D  ++RMA +       VKF+E+DV ++ DL+K L V AVPT+ +HAG  G V  F+CGP K  +L + ++  K +  L        G ++   D++N   P
Sbjct:   73 TANAPVTLIKSKAEYDEILRHNINSLVVIKFFAPWCRSCKALDVKYRRMAVE----NDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGPLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKP 212          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A7S3YAB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB7_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 2.160e-16
Identity = 46/125 (36.80%), Postives = 78/125 (62.40%), Query Frame = 0
Query:   70 PQDTLTSAEAGVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMA-AQYKKSGAPVKFLEVDVTEARD--LQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVVEKHL 191
            P + +++AE  V  V   +EYL+ L +S++Q VV+KF+ P+CRSCKA+D  F++ A  +Y  +   V+F E DV + ++  ++K L++  +P + ++ G +G VE F CGPSK     + +E  L
Sbjct:   79 PSENMSNAEDRVGEVWGMQEYLDVLTQSKNQLVVMKFYAPWCRSCKALDVKFRKWARGEY--AARDVRFFECDVFDPQNAAIKKMLEIDNIPLVHMYQGSQGKVEDFKCGPSKFEYFVERLEARL 201          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.570e-16
Identity = 38/108 (35.19%), Postives = 73/108 (67.59%), Query Frame = 0
Query:   80 GVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVV 187
            G+  +  +EE+   L ++QD+ +++KF+ P+CR+CK ++  F +++   K +  P+ F ++ V  A++  K+L V+A+P++ ++ GEEGL+E F CGPSK+  LK+ +
Sbjct:  115 GIYDLESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPILKKKI 222          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: B8CB63_THAPS (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB63_THAPS)

HSP 1 Score: 78.6 bits (192), Expect = 1.730e-15
Identity = 34/87 (39.08%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   99 DQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQ 185
            D+ +V+KF+ P+CR+CKA++  + +++   + S  P+ F ++ V   +   KSL ++A+P++ ++AG EGLVE F CGPSK+  LK+
Sbjct:    1 DKLMVIKFYAPWCRACKAVEPKYVQISKDPQYSSIPIVFGQLSVQHNKAYVKSLGILALPSMQIYAGSEGLVENFPCGPSKIPMLKR 87          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A7S1XH33_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH33_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 6.560e-15
Identity = 46/119 (38.66%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   76 SAEAGVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSG---APVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVVEKHL 191
            S  + V+ +H + E+L ALA + D+ VVVK++ PYCRSCKA+   F++ A +  ++      V F EVD++E + L ++  V  +PTI  +  + G+VE F+ GPSK   LK  V + L
Sbjct:   70 STPSPVRALHGEGEFLAALASADDRLVVVKWYAPYCRSCKALGVKFEKYARETVRASWAKGRVLFFEVDISENKQLYRAHQVQYLPTIRFYKRDLGMVEDFTVGPSKFQILKAKVTQWL 188          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: K0SW29_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW29_THAOC)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-14
Identity = 38/106 (35.85%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   80 GVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQ 185
            G+  +   E++   L  + D+ +V+KFF P+CR+CK+++  + +++   K +  P+ F ++ V   +   KSL +MA+P++ ++AG EGLVE F CGPSK+  LK+
Sbjct:   89 GIWDIQTPEQHTAWLDANSDKIMVIKFFAPWCRACKSVEPKYVQISRDPKYANIPIIFGQLSVQNNKSYVKSLGIMALPSVQIYAGSEGLVENFPCGPSKIPLLKR 194          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A7S2UB36_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB36_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.970e-14
Identity = 42/107 (39.25%), Postives = 70/107 (65.42%), Query Frame = 0
Query:   80 GVQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEG-LVERFSCGPSKLSKLKQ 185
            G+  + D+E++L  L + +D+ VV+KF+ P+CR+CKA+   F  ++   K  G P+ + ++ V   +D  KSL V+A+P++ ++AG  G LVE F CGPSK+  LK+
Sbjct:   75 GMYEIIDKEQHLAFLKKHEDKLVVLKFYAPWCRACKALAPRFVMISQDEKYKGLPMVWAQMSVQHNKDYIKSLGVLALPSVHIYAGGAGGLVENFPCGPSKVPILKR 181          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A7S1DEN1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DEN1_CYCTE)

HSP 1 Score: 72.0 bits (175), Expect = 5.750e-12
Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = 0
Query:   81 VQRVHDQEEYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQY-KKSGAPVKFLEVDVTEAR-DLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVVEKHL 191
            ++RV +  ++ NA+ +  D+ VVV+++ P+CR+CKA    +KR+ ++    S + VKF++  VT+   DL KSL +  +P   ++  E+GLVE    G  + S  ++V++ +L
Sbjct:   67 IERVENFADFRNAVMDETDKIVVVRYYAPWCRACKAATPSYKRLTSEILSSSSSAVKFVDCPVTQTNTDLHKSLGIKTIPFAHIYHPEDGLVEEQKIGRRQFSSFEKVLKSYL 179          
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD)

HSP 1 Score: 72.0 bits (175), Expect = 6.550e-12
Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   89 EYLNALAESQDQEVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQKSLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKL-KQVVEKHLGHLE 195
            +YL AL  S ++ VV+KF+ P+CRSCKAM+   KR+A +Y +    + F EVD  E  +L + + V ++P    + G  G VE F+ GP++   L ++V E   G  E
Sbjct:   90 DYLAALECSSERLVVIKFYAPWCRSCKAMEPKVKRLAREYPE----ILFCEVDFQENHELCRRIGVKSIPAFHFYDGSAGRVEDFTAGPARAKMLIEKVAEYAAGRCE 193          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig89.20339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A835Z936_9STRA4.070e-2140.30Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A6H5KYE3_9PHAE1.990e-1837.50Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S3YAB7_HETAK2.160e-1636.80Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3VCG8_9STRA5.570e-1635.19Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
B8CB63_THAPS1.730e-1539.08Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S1XH33_9RHOD6.560e-1538.66Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
K0SW29_THAOC1.190e-1435.85Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2UB36_9STRA2.970e-1439.25Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1DEN1_CYCTE5.750e-1232.74Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TN71_9RHOD6.550e-1237.96Hypothetical protein n=1 Tax=Erythrolobus australi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 71..199
e-value: 9.2E-20
score: 72.6
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 76..193
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 76..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..226
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.692
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 84..188
e-value: 2.3E-16
score: 59.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 63..192
score: 10.41
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 79..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig89contigS-ischiensis_contig89:31730..32885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig89.20339.1mRNA_S-ischiensis_contig89.20339.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig89 31688..33037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig89.20339.1 ID=prot_S-ischiensis_contig89.20339.1|Name=mRNA_S-ischiensis_contig89.20339.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=227bp
MNSLVAVVALWASSVYGFVAPSLSLSVASGPRRSTSPASSLPGFRAATGP
SPSITIRMGVVYAPVTPIIPQDTLTSAEAGVQRVHDQEEYLNALAESQDQ
EVVVKFFTPYCRSCKAMDRGFKRMAAQYKKSGAPVKFLEVDVTEARDLQK
SLDVMAVPTIMVHAGEEGLVERFSCGPSKLSKLKQVVEKHLGHLERIAKN
IEGALDGALDDVNFGGPGPHGPARLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf