prot_S-ischiensis_contig86.20197.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig86.20197.1
Unique Nameprot_S-ischiensis_contig86.20197.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length225
Homology
BLAST of mRNA_S-ischiensis_contig86.20197.1 vs. uniprot
Match: A0A6H5JGV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 2.410e-10
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MLVDSMSTMAVQAVFYGKSQFSVNQKVIMVVTSMLFMMPALALFPWLLRIANTPPQSQTV 60
            +L D MS +A+QAVFYGKSQFS+  K  M VT+ LFM+P   +FP+LLR ANTPP S+TV
Sbjct:  127 LLADWMSAVALQAVFYGKSQFSIRNKAQMTVTTALFMIPTALVFPFLLRKANTPPISETV 186          
BLAST of mRNA_S-ischiensis_contig86.20197.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.280e-9
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MLVDSMSTMAVQAVFYGKSQFSVNQKVIMVVTSMLFMMPALALFPWLLRIANTPPQSQTVK 61
            +L D MS + +QA+FYGKSQF V QKV M V S L M+P   +FP LLR  NTPP SQT+K
Sbjct:  959 LLADWMSAILLQAIFYGKSQFGVRQKVEMTVVSALLMLPTGVIFPALLRAGNTPPASQTLK 1019          
BLAST of mRNA_S-ischiensis_contig86.20197.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.210e-7
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MLVDSMSTMAVQAVFYGKSQFSVNQKVIMVVTSMLFMMPALALFPWLLRIANTPPQSQTV 60
            +L D MS + +QA+FYGKSQF V     M V S LFM+PA  +FP LLR+ANTPP SQT+
Sbjct: 1110 LLTDWMSAIVLQALFYGKSQFGVE----MAVVSALFMLPAGVVFPALLRVANTPPASQTL 1165          
BLAST of mRNA_S-ischiensis_contig86.20197.1 vs. uniprot
Match: A0A6H5JVI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI0_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-7
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    6 MSTMAVQAVFYGKSQFSVNQKVIMVVTSMLFMMPALALFPWLLRIANTPPQSQTV 60
            MS + +QA+FYGKSQFS+ +K  M   + LFM+P   +FP ++R+ANTPP S+T+
Sbjct:    1 MSAVTLQAIFYGKSQFSIREKAEMTAATALFMIPTALVFPAMMRLANTPPSSETL 55          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig86.20197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGV2_9PHAE2.410e-1061.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCS7_9PHAE3.280e-959.02REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB6_ECTSI1.210e-758.33GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVI0_9PHAE1.760e-750.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig86contigS-ischiensis_contig86:292013..294774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig86.20197.1mRNA_S-ischiensis_contig86.20197.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig86 291751..294774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig86.20197.1 ID=prot_S-ischiensis_contig86.20197.1|Name=mRNA_S-ischiensis_contig86.20197.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=225bp
MLVDSMSTMAVQAVFYGKSQFSVNQKVIMVVTSMLFMMPALALFPWLLRI
ANTPPQSQTVKAAKECREIARERVIQKKREAKFCLETEMEGNTAESSHDL
DDVPLGWGNYTLRKTERNRRKSSVRNRRKSSVLAVVQAVQQNKAVSFLLD
EAHGRDYSYLDDPDDWRNDLYHKEQEEDDDSQLGGLGVPCTELNDDIAQL
HMILVLADLALCVVFFTFISVLLNM
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