prot_S-ischiensis_contig85.20145.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig85.20145.1
Unique Nameprot_S-ischiensis_contig85.20145.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length127
Homology
BLAST of mRNA_S-ischiensis_contig85.20145.1 vs. uniprot
Match: A0A836CI19_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI19_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.040e-9
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    9 VGHQSGIDAREGQLRESLQRVVREIEGVVARE-GQEDSVTVDPDGLIPDAFWERNEAPFRASVS 71
            VGHQSGIDA E +LRE    VV  I  V+AR+  Q  SV+VDP G +P AF+ERNE  FR  +S
Sbjct:  834 VGHQSGIDASEERLREGAVAVVSAIAAVIARDDAQGTSVSVDPYGTVPAAFFERNEGAFRGGIS 897          
BLAST of mRNA_S-ischiensis_contig85.20145.1 vs. uniprot
Match: B7FRE1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRE1_PHATC)

HSP 1 Score: 56.2 bits (134), Expect = 1.290e-6
Identity = 40/137 (29.20%), Postives = 66/137 (48.18%), Query Frame = 0
Query:    5 LLALVGHQSGIDAREGQLRESLQRVVREIEGVVAREGQEDSVTVDPD---------GLIPDAFWERNEAPFRASVSRDNKKVGLAYRKVEQAAQQLIKAVGEDFSANPRD-------------VTDDILDNRICLKK 119
            L+ L+ ++SG+      LR+     ++EIE +++         +DP          GL+P AF+ERNEA +R  V  D   V  +Y  V++AA+ L +AV +DF   PR              +  DI +N + +K+
Sbjct:  713 LMTLLEYESGLAGDPNSLRDRCHEAIKEIEAIISPIHHSSWSELDPSAIDCITDFGGLVPRAFFERNEATWRGRVQPDV--VLKSYTDVQRAAELLGEAVAKDFWQTPRQDLEGNPDTTSKSLIAQDIFNNILAMKE 847          
BLAST of mRNA_S-ischiensis_contig85.20145.1 vs. uniprot
Match: A0A7S2P1T4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P1T4_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.770e-5
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    5 LLALVGHQSGIDAREGQLRESLQRVVREIEGVVAREGQEDSVTVDPDGLIPDAFWERNEAPFRASVSRDNKKVGLAYRKVEQAAQQLIKAVGEDF 99
            +L L+  +SG+ A    LR      V +I+ VV  E      + D   +IP A++ERNE P+R  VSR   K+  +Y+ VE AA +L   V  DF
Sbjct:  231 MLELLIFESGLSAEPHSLRSRCFDCVTKIKSVVMTEKDLGDPSSDFGDIIPKAYFERNEEPWRGRVSRQ--KMLNSYQSVEDAAHELADCVARDF 323          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CI19_9STRA1.040e-956.25AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
B7FRE1_PHATC1.290e-629.20Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2P1T4_9STRA2.770e-536.84Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:373911..378064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20145.1mRNA_S-ischiensis_contig85.20145.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig85 373911..378064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig85.20145.1 ID=prot_S-ischiensis_contig85.20145.1|Name=mRNA_S-ischiensis_contig85.20145.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=127bp
LLPHLLALVGHQSGIDAREGQLRESLQRVVREIEGVVAREGQEDSVTVDP
DGLIPDAFWERNEAPFRASVSRDNKKVGLAYRKVEQAAQQLIKAVGEDFS
ANPRDVTDDILDNRICLKKRHAAAKAN
back to top