prot_S-ischiensis_contig85.20133.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig85.20133.1
Unique Nameprot_S-ischiensis_contig85.20133.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length139
Homology
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BLAST of mRNA_S-ischiensis_contig85.20133.1 vs. uniprot
Match: A0A6C0GEE7_9BACT (Uncharacterized protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GEE7_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.950e-6
Identity = 24/60 (40.00%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:    3 DIWQAARANNVPRIKKLLEEGVSPNKTRWSGVSPLHRAAEENACEVAHVLIKAGADVDMK 62
            ++++A   NN   ++ LL +G  PNK   +G+ PL RA  +N  ++A +LIK GADV++K
Sbjct:   21 NLYKAVEKNNYQEVESLLTKGADPNKYHKNGLFPLWRACADNQYDIAKLLIKNGADVNLK 80
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BLAST of mRNA_S-ischiensis_contig85.20133.1 vs. uniprot
Match: UPI0003FB8CC6 (ankyrin repeat domain-containing protein n=1 Tax=Salinimicrobium xinjiangense TaxID=438596 RepID=UPI0003FB8CC6)

HSP 1 Score: 53.5 bits (127), Expect = 9.460e-6
Identity = 23/59 (38.98%), Postives = 41/59 (69.49%), Query Frame = 0 
Query:    4 IWQAARANNVPRIKKLLEEGVSPNKTRWSGVSPLHRAAEENACEVAHVLIKAGADVDMK 62
            +++A    N+ +++KLL +G  PN+   +G+ PL RA  +N+ E+A +LIK GADV+++
Sbjct:   22 LYKAVEKENLSKVEKLLAKGEDPNEFSENGLFPLWRATADNSYEIAALLIKNGADVNLE 80
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BLAST of mRNA_S-ischiensis_contig85.20133.1 vs. uniprot
Match: A0A534Q6J3_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Q6J3_9DELT)

HSP 1 Score: 50.8 bits (120), Expect = 9.580e-6
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0 
Query:    2 GDIWQAARANNVPRIKKLLEEGVSPNKTRWSGVSPLHRAAEENACEVAHVLIKAGADV 59
            G+I  AA+AN+V ++K LL  GV        G SPLH AA+ NA E   +L+  G+DV
Sbjct:   28 GEIHDAAKANDVEKVKTLLANGVDVKAKDNEGDSPLHVAAKHNAKETVTLLLDKGSDV 85
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6C0GEE7_9BACT1.950e-640.00Uncharacterized protein n=1 Tax=Rhodocytophaga ros... [more]
UPI0003FB8CC69.460e-638.98ankyrin repeat domain-containing protein n=1 Tax=S... [more]
A0A534Q6J3_9DELT9.580e-644.83Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 32..61
e-value: 0.0037
score: 26.5
coord: 66..95
e-value: 0.0015
score: 27.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 66..98
score: 11.274
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 12.583
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..117
e-value: 1.1E-30
score: 108.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..115
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 6..95
e-value: 1.9E-12
score: 47.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..121
score: 26.39
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 5..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:257843..261781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20133.1mRNA_S-ischiensis_contig85.20133.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig85 256573..261812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig85.20133.1 ID=prot_S-ischiensis_contig85.20133.1|Name=mRNA_S-ischiensis_contig85.20133.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=139bp
MGDIWQAARANNVPRIKKLLEEGVSPNKTRWSGVSPLHRAAEENACEVAH
VLIKAGADVDMKTAWGWFSPMHLACQRGHEEVAELLLKAGAKWTILDKRL
QSPYDLAAKAGLDEQALRIQLIARKVAAERRMLLHGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom